RNA–Protein interactions for RNA: ENST00000433650.5

SEMA4D-210, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-210ENST00000433650 KDRP35968 1356 aa18.62■□□□□ 0.57
SEMA4D-210ENST00000433650 SMIM5Q71RC9 77 aa18.61■□□□□ 0.57
SEMA4D-210ENST00000433650 IFNL2Q8IZJ0 200 aa18.61■□□□□ 0.57
SEMA4D-210ENST00000433650 CLSPNQ9HAW4 1339 aa18.6■□□□□ 0.57
SEMA4D-210ENST00000433650 EIF4A2Q14240 407 aaKnown RBP18.6■□□□□ 0.57
SEMA4D-210ENST00000433650 ASAP1Q9ULH1 1129 aa18.6■□□□□ 0.57
SEMA4D-210ENST00000433650 TJP1Q07157 1748 aa18.6■□□□□ 0.57
SEMA4D-210ENST00000433650 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
SEMA4D-210ENST00000433650 ARFGEF1Q9Y6D6 1849 aa18.59■□□□□ 0.57
SEMA4D-210ENST00000433650 ITPK1Q13572 414 aa18.59■□□□□ 0.57
SEMA4D-210ENST00000433650 CEP350Q5VT06 3117 aa18.59■□□□□ 0.57
SEMA4D-210ENST00000433650 GNPATO15228 680 aa18.58■□□□□ 0.56
SEMA4D-210ENST00000433650 TNNT2P45379 298 aaPredicted RBP18.58■□□□□ 0.56
SEMA4D-210ENST00000433650 POLR3GLQ9BT43 218 aa18.58■□□□□ 0.56
SEMA4D-210ENST00000433650 ATP6V1AP38606 617 aa18.57■□□□□ 0.56
SEMA4D-210ENST00000433650 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
SEMA4D-210ENST00000433650 ATG3Q9NT62 314 aa18.56■□□□□ 0.56
SEMA4D-210ENST00000433650 PXDNLA1KZ92 1463 aa18.55■□□□□ 0.56
SEMA4D-210ENST00000433650 C10orf71Q711Q0 1435 aa18.53■□□□□ 0.56
SEMA4D-210ENST00000433650 WWC3Q9ULE0 1092 aa18.53■□□□□ 0.56
SEMA4D-210ENST00000433650 ADAMTS7Q9UKP4 1686 aa18.53■□□□□ 0.56
SEMA4D-210ENST00000433650 ERVV-2B6SEH9 535 aa18.52■□□□□ 0.56
SEMA4D-210ENST00000433650 GPBP1L1Q9HC44 474 aaPredicted RBP18.52■□□□□ 0.56
SEMA4D-210ENST00000433650 HSP90AB1P08238 724 aaKnown RBP18.51■□□□□ 0.55
SEMA4D-210ENST00000433650 MMP10P09238 476 aa18.51■□□□□ 0.55
SEMA4D-210ENST00000433650 DCAF5Q96JK2 942 aa18.51■□□□□ 0.55
SEMA4D-210ENST00000433650 SLC4A9Q96Q91 983 aa18.51■□□□□ 0.55
SEMA4D-210ENST00000433650 CNTNAP4Q9C0A0 1308 aa18.5■□□□□ 0.55
SEMA4D-210ENST00000433650 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
SEMA4D-210ENST00000433650 PANK3Q9H999 370 aa18.5■□□□□ 0.55
SEMA4D-210ENST00000433650 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
SEMA4D-210ENST00000433650 PLEKHO1Q53GL0 409 aaPredicted RBP18.49■□□□□ 0.55
SEMA4D-210ENST00000433650 ZNF530Q6P9A1 599 aaPredicted RBP18.49■□□□□ 0.55
SEMA4D-210ENST00000433650 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
SEMA4D-210ENST00000433650 RTCBQ9Y3I0 505 aaKnown RBP18.49■□□□□ 0.55
SEMA4D-210ENST00000433650 AFDNP55196 1824 aaKnown RBP18.49■□□□□ 0.55
SEMA4D-210ENST00000433650 SBF1O95248 1867 aa18.48■□□□□ 0.55
SEMA4D-210ENST00000433650 ADRA2BP18089 450 aa18.48■□□□□ 0.55
SEMA4D-210ENST00000433650 ZNF526Q8TF50 670 aaPredicted RBP18.48■□□□□ 0.55
SEMA4D-210ENST00000433650 PCGF6Q9BYE7 350 aa18.48■□□□□ 0.55
SEMA4D-210ENST00000433650 AMOTQ4VCS5 1084 aa18.47■□□□□ 0.55
SEMA4D-210ENST00000433650 TRAPPC3LQ5T215 181 aa18.47■□□□□ 0.55
SEMA4D-210ENST00000433650 AEBP1Q8IUX7 1158 aa18.47■□□□□ 0.55
SEMA4D-210ENST00000433650 UBR2Q8IWV8 1755 aa18.46■□□□□ 0.55
SEMA4D-210ENST00000433650 DLEC1Q9Y238 1755 aa18.46■□□□□ 0.55
SEMA4D-210ENST00000433650 RC3H1Q5TC82 1133 aaKnown RBP18.46■□□□□ 0.55
SEMA4D-210ENST00000433650 MRC1P22897 1456 aa18.46■□□□□ 0.54
SEMA4D-210ENST00000433650 CABP4P57796 275 aa18.45■□□□□ 0.54
SEMA4D-210ENST00000433650 NLGN1Q8N2Q7 840 aa18.45■□□□□ 0.54
SEMA4D-210ENST00000433650 ARHGEF1Q92888 912 aaKnown RBP18.45■□□□□ 0.54
SEMA4D-210ENST00000433650 GYS1P13807 737 aa18.44■□□□□ 0.54
SEMA4D-210ENST00000433650 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
SEMA4D-210ENST00000433650 RPS6KA4O75676 772 aa18.43■□□□□ 0.54
SEMA4D-210ENST00000433650 MTHFSP49914 203 aa18.43■□□□□ 0.54
SEMA4D-210ENST00000433650 TGFB2P61812 414 aa18.43■□□□□ 0.54
SEMA4D-210ENST00000433650 C1orf141Q5JVX7 400 aa18.43■□□□□ 0.54
SEMA4D-210ENST00000433650 CCDC87Q9NVE4 849 aa18.43■□□□□ 0.54
SEMA4D-210ENST00000433650 RFC4P35249 363 aa18.42■□□□□ 0.54
SEMA4D-210ENST00000433650 NRXN2Q9P2S2 1712 aa18.42■□□□□ 0.54
SEMA4D-210ENST00000433650 CCDC88AQ3V6T2 1871 aa18.41■□□□□ 0.54
SEMA4D-210ENST00000433650 HSPA6P17066 643 aa18.41■□□□□ 0.54
SEMA4D-210ENST00000433650 SULT6B1Q6IMI4 303 aa18.41■□□□□ 0.54
SEMA4D-210ENST00000433650 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
SEMA4D-210ENST00000433650 A0A0G2JLW4 131 aa18.4■□□□□ 0.54
SEMA4D-210ENST00000433650 PTCD1O75127 700 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-210ENST00000433650 CRKLP46109 303 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-210ENST00000433650 BCS1LQ9Y276 419 aa18.4■□□□□ 0.54
SEMA4D-210ENST00000433650 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
SEMA4D-210ENST00000433650 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-210ENST00000433650 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.54
SEMA4D-210ENST00000433650 KIF3CO14782 793 aa18.39■□□□□ 0.53
SEMA4D-210ENST00000433650 IL13P35225 146 aa18.39■□□□□ 0.53
SEMA4D-210ENST00000433650 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
SEMA4D-210ENST00000433650 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.53
SEMA4D-210ENST00000433650 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
SEMA4D-210ENST00000433650 USP42Q9H9J4 1324 aaKnown RBP18.39■□□□□ 0.53
SEMA4D-210ENST00000433650 DPEP1P16444 411 aa18.38■□□□□ 0.53
SEMA4D-210ENST00000433650 SRP68Q9UHB9 627 aaKnown RBP18.37■□□□□ 0.53
SEMA4D-210ENST00000433650 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
SEMA4D-210ENST00000433650 TIAM2Q8IVF5 1701 aa18.36■□□□□ 0.53
SEMA4D-210ENST00000433650 SCN7AQ01118 1682 aa18.35■□□□□ 0.53
SEMA4D-210ENST00000433650 FCHSD2O94868 740 aa18.35■□□□□ 0.53
SEMA4D-210ENST00000433650 DDR1Q08345 913 aa18.35■□□□□ 0.53
SEMA4D-210ENST00000433650 AKAP4Q5JQC9 854 aa18.35■□□□□ 0.53
SEMA4D-210ENST00000433650 FKBP8Q14318 412 aa18.34■□□□□ 0.53
SEMA4D-210ENST00000433650 ANKRD31Q8N7Z5 1873 aa18.34■□□□□ 0.53
SEMA4D-210ENST00000433650 CACNA1SQ13698 1873 aa18.33■□□□□ 0.53
SEMA4D-210ENST00000433650 KCNA3P22001 575 aa18.33■□□□□ 0.52
SEMA4D-210ENST00000433650 INTS5Q6P9B9 1019 aaKnown RBP18.33■□□□□ 0.52
SEMA4D-210ENST00000433650 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.52
SEMA4D-210ENST00000433650 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
SEMA4D-210ENST00000433650 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
SEMA4D-210ENST00000433650 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
SEMA4D-210ENST00000433650 COL3A1P02461 1466 aaPredicted RBP18.32■□□□□ 0.52
SEMA4D-210ENST00000433650 DICER1Q9UPY3 1922 aaKnown RBP18.31■□□□□ 0.52
SEMA4D-210ENST00000433650 POLRMTO00411 1230 aaKnown RBP18.31■□□□□ 0.52
SEMA4D-210ENST00000433650 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
SEMA4D-210ENST00000433650 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
SEMA4D-210ENST00000433650 PIM2Q9P1W9 311 aa18.31■□□□□ 0.52
SEMA4D-210ENST00000433650 COL15A1P39059 1388 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms