RNA–Protein interactions for RNA: ENST00000433642.2

BLOC1S3-201, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene BLOC1S3, Length 2,601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-201ENST00000433642 NECTIN2Q92692 538 aa23.12■■□□□ 1.29
BLOC1S3-201ENST00000433642 ERC2O15083 957 aa23.11■■□□□ 1.29
BLOC1S3-201ENST00000433642 FLIIQ13045 1269 aa23.11■■□□□ 1.29
BLOC1S3-201ENST00000433642 REC8O95072 547 aa23.11■■□□□ 1.29
BLOC1S3-201ENST00000433642 STK31Q9BXU1 1019 aa23.11■■□□□ 1.29
BLOC1S3-201ENST00000433642 ZGPATQ8N5A5 531 aaKnown RBP23.1■■□□□ 1.29
BLOC1S3-201ENST00000433642 SALL3Q9BXA9 1300 aa23.1■■□□□ 1.29
BLOC1S3-201ENST00000433642 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
BLOC1S3-201ENST00000433642 LRRC37A3O60309 1634 aa23.09■■□□□ 1.29
BLOC1S3-201ENST00000433642 PNMA6EA0A0J9YXQ4 647 aa23.09■■□□□ 1.29
BLOC1S3-201ENST00000433642 NLRP6P59044 892 aa23.09■■□□□ 1.29
BLOC1S3-201ENST00000433642 NUTM2GQ5VZR2 741 aa23.09■■□□□ 1.29
BLOC1S3-201ENST00000433642 GOLGA6L22H0YM25 854 aa23.09■■□□□ 1.29
BLOC1S3-201ENST00000433642 FKBP5Q13451 457 aaPredicted RBP23.09■■□□□ 1.29
BLOC1S3-201ENST00000433642 FAM208AQ9UK61 1670 aaKnown RBP23.08■■□□□ 1.29
BLOC1S3-201ENST00000433642 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.29
BLOC1S3-201ENST00000433642 ST18O60284 1047 aa23.08■■□□□ 1.28
BLOC1S3-201ENST00000433642 NUCB2P80303 420 aa23.08■■□□□ 1.28
BLOC1S3-201ENST00000433642 KLHL40Q2TBA0 621 aa23.08■■□□□ 1.28
BLOC1S3-201ENST00000433642 DDX49Q9Y6V7 483 aaKnown RBP23.08■■□□□ 1.28
BLOC1S3-201ENST00000433642 XRN1Q8IZH2 1706 aaKnown RBP23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 GNAT3A8MTJ3 354 aa23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 RBM10P98175 930 aaKnown RBP23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 IL17REQ8NFR9 667 aa23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 NWD1Q149M9 1564 aa23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 ARHGAP23Q9P227 1491 aa23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 HOXC9P31274 260 aa23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 MCTP1Q6DN14 999 aa23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 SLIT1O75093 1534 aa23.07■■□□□ 1.28
BLOC1S3-201ENST00000433642 CCDC30Q5VVM6 783 aa23.06■■□□□ 1.28
BLOC1S3-201ENST00000433642 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
BLOC1S3-201ENST00000433642 LRRCC1Q9C099 1032 aa23.05■■□□□ 1.28
BLOC1S3-201ENST00000433642 MARF1Q9Y4F3 1742 aaKnown RBP23.04■■□□□ 1.28
BLOC1S3-201ENST00000433642 ATP8B2P98198 1209 aa23.04■■□□□ 1.28
BLOC1S3-201ENST00000433642 ZDHHC9Q9Y397 364 aa23.04■■□□□ 1.28
BLOC1S3-201ENST00000433642 GNAI3P08754 354 aa23.04■■□□□ 1.28
BLOC1S3-201ENST00000433642 CWC22Q9HCG8 908 aaKnown RBP23.04■■□□□ 1.28
BLOC1S3-201ENST00000433642 ERBB4Q15303 1308 aa23.03■■□□□ 1.28
BLOC1S3-201ENST00000433642 LMBRD1Q9NUN5 540 aa23.03■■□□□ 1.28
BLOC1S3-201ENST00000433642 MX1P20591 662 aa23.03■■□□□ 1.28
BLOC1S3-201ENST00000433642 LTV1Q96GA3 475 aaPredicted RBP23.03■■□□□ 1.28
BLOC1S3-201ENST00000433642 LRRFIP2Q9Y608 721 aaKnown RBP23.03■■□□□ 1.28
BLOC1S3-201ENST00000433642 IBTKQ9P2D0 1353 aaPredicted RBP23.02■■□□□ 1.28
BLOC1S3-201ENST00000433642 ESYT1Q9BSJ8 1104 aa23.02■■□□□ 1.28
BLOC1S3-201ENST00000433642 MAP3K5Q99683 1374 aa23.02■■□□□ 1.28
BLOC1S3-201ENST00000433642 USP44Q9H0E7 712 aa23■■□□□ 1.27
BLOC1S3-201ENST00000433642 NEK4P51957 841 aa23■■□□□ 1.27
BLOC1S3-201ENST00000433642 TAF7Q15545 349 aaPredicted RBP23■■□□□ 1.27
BLOC1S3-201ENST00000433642 CHAMP1Q96JM3 812 aa23■■□□□ 1.27
BLOC1S3-201ENST00000433642 PALD1Q9ULE6 856 aa23■■□□□ 1.27
BLOC1S3-201ENST00000433642 USHBP1Q8N6Y0 703 aa22.99■■□□□ 1.27
BLOC1S3-201ENST00000433642 UNC5CLQ8IV45 518 aa22.99■■□□□ 1.27
BLOC1S3-201ENST00000433642 CACNA1FO60840 1977 aa22.98■■□□□ 1.27
BLOC1S3-201ENST00000433642 ESPNB1AK53 854 aa22.98■■□□□ 1.27
BLOC1S3-201ENST00000433642 KCNA6P17658 529 aa22.98■■□□□ 1.27
BLOC1S3-201ENST00000433642 CHMLP26374 656 aa22.98■■□□□ 1.27
BLOC1S3-201ENST00000433642 ABTB2Q8N961 1025 aa22.98■■□□□ 1.27
BLOC1S3-201ENST00000433642 RILPL2Q969X0 211 aa22.98■■□□□ 1.27
BLOC1S3-201ENST00000433642 PHAXQ9H814 394 aaKnown RBP22.98■■□□□ 1.27
BLOC1S3-201ENST00000433642 CAVIN1Q6NZI2 390 aaKnown RBP22.97■■□□□ 1.27
BLOC1S3-201ENST00000433642 TMX3Q96JJ7 454 aa22.97■■□□□ 1.27
BLOC1S3-201ENST00000433642 STAP2Q9UGK3 403 aa22.97■■□□□ 1.27
BLOC1S3-201ENST00000433642 TRIM6-TRIM34B2RNG4 842 aa22.96■■□□□ 1.27
BLOC1S3-201ENST00000433642 NCLP19338 710 aaKnown RBP22.96■■□□□ 1.27
BLOC1S3-201ENST00000433642 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
BLOC1S3-201ENST00000433642 ANKARQ7Z5J8 1434 aa22.96■■□□□ 1.27
BLOC1S3-201ENST00000433642 NASPP49321 788 aaPredicted RBP22.95■■□□□ 1.27
BLOC1S3-201ENST00000433642 PRPF40AO75400 957 aaKnown RBP22.95■■□□□ 1.26
BLOC1S3-201ENST00000433642 ZNF445P59923 1031 aa22.95■■□□□ 1.26
BLOC1S3-201ENST00000433642 HDGFL1Q5TGJ6 251 aa22.95■■□□□ 1.26
BLOC1S3-201ENST00000433642 IL1RAPL2Q9NP60 686 aa22.95■■□□□ 1.26
BLOC1S3-201ENST00000433642 UBTFL1P0CB47 393 aaPredicted RBP22.95■■□□□ 1.26
BLOC1S3-201ENST00000433642 ZSCAN23Q3MJ62 389 aa22.95■■□□□ 1.26
BLOC1S3-201ENST00000433642 ANO2Q9NQ90 1003 aa22.95■■□□□ 1.26
BLOC1S3-201ENST00000433642 PRDM4Q9UKN5 801 aa22.95■■□□□ 1.26
BLOC1S3-201ENST00000433642 SOS1Q07889 1333 aaPredicted RBP22.94■■□□□ 1.26
BLOC1S3-201ENST00000433642 PXDNLA1KZ92 1463 aa22.94■■□□□ 1.26
BLOC1S3-201ENST00000433642 THEMISQ8N1K5 641 aaPredicted RBP22.94■■□□□ 1.26
BLOC1S3-201ENST00000433642 GPT2Q8TD30 523 aa22.94■■□□□ 1.26
BLOC1S3-201ENST00000433642 TRIM44Q96DX7 344 aaPredicted RBP22.94■■□□□ 1.26
BLOC1S3-201ENST00000433642 IL25Q9H293 177 aa22.94■■□□□ 1.26
BLOC1S3-201ENST00000433642 BABAM1Q9NWV8 329 aa22.94■■□□□ 1.26
BLOC1S3-201ENST00000433642 USP54Q70EL1 1684 aa22.93■■□□□ 1.26
BLOC1S3-201ENST00000433642 FOXD4L5Q5VV16 416 aaPredicted RBP22.93■■□□□ 1.26
BLOC1S3-201ENST00000433642 SSH3Q8TE77 659 aa22.93■■□□□ 1.26
BLOC1S3-201ENST00000433642 FOXD4L4Q8WXT5 416 aaPredicted RBP22.93■■□□□ 1.26
BLOC1S3-201ENST00000433642 PPP1R9BQ96SB3 815 aa22.92■■□□□ 1.26
BLOC1S3-201ENST00000433642 SRCIN1Q9C0H9 1055 aa22.92■■□□□ 1.26
BLOC1S3-201ENST00000433642 RBM27Q9P2N5 1060 aaKnown RBP22.92■■□□□ 1.26
BLOC1S3-201ENST00000433642 C14orf37Q86TY3 774 aa22.91■■□□□ 1.26
BLOC1S3-201ENST00000433642 NUTM1Q86Y26 1132 aa22.91■■□□□ 1.26
BLOC1S3-201ENST00000433642 NOL8Q76FK4 1167 aaKnown RBP22.91■■□□□ 1.26
BLOC1S3-201ENST00000433642 PPP1R42Q7Z4L9 355 aa22.91■■□□□ 1.26
BLOC1S3-201ENST00000433642 CCDC173Q0VFZ6 552 aa22.9■■□□□ 1.26
BLOC1S3-201ENST00000433642 CUL4AQ13619 759 aa22.9■■□□□ 1.26
BLOC1S3-201ENST00000433642 PDCL3Q9H2J4 239 aa22.9■■□□□ 1.26
BLOC1S3-201ENST00000433642 CEMIPQ8WUJ3 1361 aa22.9■■□□□ 1.26
BLOC1S3-201ENST00000433642 EIF2S2P20042 333 aaKnown RBP22.9■■□□□ 1.26
BLOC1S3-201ENST00000433642 MCCP23508 829 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms