RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 SIK1P57059 783 aa13.05□□□□□ -0.32
RFC4-207ENST00000433496 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
RFC4-207ENST00000433496 COL23A1Q86Y22 540 aaPredicted RBP13.05□□□□□ -0.32
RFC4-207ENST00000433496 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
RFC4-207ENST00000433496 PHF14O94880 888 aa13.04□□□□□ -0.32
RFC4-207ENST00000433496 IL13P35225 146 aa13.04□□□□□ -0.32
RFC4-207ENST00000433496 CABP4P57796 275 aa13.04□□□□□ -0.32
RFC4-207ENST00000433496 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
RFC4-207ENST00000433496 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
RFC4-207ENST00000433496 KDRP35968 1356 aa13.04□□□□□ -0.32
RFC4-207ENST00000433496 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
RFC4-207ENST00000433496 MSL1Q68DK7 614 aa13.03□□□□□ -0.32
RFC4-207ENST00000433496 NPC1L1Q9UHC9 1359 aa13.03□□□□□ -0.32
RFC4-207ENST00000433496 PER1O15534 1290 aaPredicted RBP13.02□□□□□ -0.33
RFC4-207ENST00000433496 DIAPH1O60610 1272 aaKnown RBP13.02□□□□□ -0.33
RFC4-207ENST00000433496 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
RFC4-207ENST00000433496 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
RFC4-207ENST00000433496 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
RFC4-207ENST00000433496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
RFC4-207ENST00000433496 GNPATO15228 680 aa13.01□□□□□ -0.33
RFC4-207ENST00000433496 SSFA2P28290 1259 aa13.01□□□□□ -0.33
RFC4-207ENST00000433496 GPR162Q16538 588 aa13.01□□□□□ -0.33
RFC4-207ENST00000433496 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
RFC4-207ENST00000433496 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
RFC4-207ENST00000433496 HMOX1P09601 288 aa13□□□□□ -0.33
RFC4-207ENST00000433496 KCNA4P22459 653 aa12.99□□□□□ -0.33
RFC4-207ENST00000433496 AKAP4Q5JQC9 854 aa12.99□□□□□ -0.33
RFC4-207ENST00000433496 CFAP53Q96M91 514 aa12.99□□□□□ -0.33
RFC4-207ENST00000433496 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
RFC4-207ENST00000433496 ITPK1Q13572 414 aa12.98□□□□□ -0.33
RFC4-207ENST00000433496 CICQ96RK0 1608 aaPredicted RBP12.98□□□□□ -0.33
RFC4-207ENST00000433496 C4AP0C0L4 1744 aa12.97□□□□□ -0.33
RFC4-207ENST00000433496 TJP1Q07157 1748 aa12.97□□□□□ -0.33
RFC4-207ENST00000433496 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
RFC4-207ENST00000433496 RTCBQ9Y3I0 505 aaKnown RBP12.97□□□□□ -0.33
RFC4-207ENST00000433496 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
RFC4-207ENST00000433496 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
RFC4-207ENST00000433496 MRC1P22897 1456 aa12.96□□□□□ -0.34
RFC4-207ENST00000433496 MYH14Q7Z406 1995 aaKnown RBP12.96□□□□□ -0.34
RFC4-207ENST00000433496 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
RFC4-207ENST00000433496 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
RFC4-207ENST00000433496 AMIGO3Q86WK7 504 aa12.95□□□□□ -0.34
RFC4-207ENST00000433496 NLGN2Q8NFZ4 835 aa12.95□□□□□ -0.34
RFC4-207ENST00000433496 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
RFC4-207ENST00000433496 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
RFC4-207ENST00000433496 ADAMTS7Q9UKP4 1686 aa12.95□□□□□ -0.34
RFC4-207ENST00000433496 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
RFC4-207ENST00000433496 SMIM5Q71RC9 77 aa12.94□□□□□ -0.34
RFC4-207ENST00000433496 NUDCQ9Y266 331 aa12.94□□□□□ -0.34
RFC4-207ENST00000433496 RNMTO43148 476 aaKnown RBP12.93□□□□□ -0.34
RFC4-207ENST00000433496 GRIN3BO60391 1043 aa12.93□□□□□ -0.34
RFC4-207ENST00000433496 RFC4P35249 363 aa12.93□□□□□ -0.34
RFC4-207ENST00000433496 MTHFSDQ2M296 383 aaKnown RBP12.93□□□□□ -0.34
RFC4-207ENST00000433496 GAS2L2Q8NHY3 880 aa12.93□□□□□ -0.34
RFC4-207ENST00000433496 UBR2Q8IWV8 1755 aa12.93□□□□□ -0.34
RFC4-207ENST00000433496 RPS6KA4O75676 772 aa12.92□□□□□ -0.34
RFC4-207ENST00000433496 CRKLP46109 303 aaKnown RBP12.92□□□□□ -0.34
RFC4-207ENST00000433496 SLC4A9Q96Q91 983 aa12.92□□□□□ -0.34
RFC4-207ENST00000433496 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
RFC4-207ENST00000433496 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
RFC4-207ENST00000433496 MMP10P09238 476 aa12.91□□□□□ -0.34
RFC4-207ENST00000433496 TEFQ10587 303 aa12.91□□□□□ -0.34
RFC4-207ENST00000433496 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
RFC4-207ENST00000433496 NLGN1Q8N2Q7 840 aa12.91□□□□□ -0.34
RFC4-207ENST00000433496 LGR6Q9HBX8 967 aa12.91□□□□□ -0.34
RFC4-207ENST00000433496 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
RFC4-207ENST00000433496 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
RFC4-207ENST00000433496 N4BP2Q86UW6 1770 aaPredicted RBP12.89□□□□□ -0.35
RFC4-207ENST00000433496 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
RFC4-207ENST00000433496 U2AF1L5P0DN76 240 aaPredicted RBP12.89□□□□□ -0.35
RFC4-207ENST00000433496 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
RFC4-207ENST00000433496 PRKAR2BP31323 418 aa12.89□□□□□ -0.35
RFC4-207ENST00000433496 U2AF1Q01081 240 aaKnown RBP eCLIP12.89□□□□□ -0.35
RFC4-207ENST00000433496 NEFMP07197 916 aa12.88□□□□□ -0.35
RFC4-207ENST00000433496 YBX3P16989 372 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■■□□□ 11.9
RFC4-207ENST00000433496 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
RFC4-207ENST00000433496 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
RFC4-207ENST00000433496 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
RFC4-207ENST00000433496 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
RFC4-207ENST00000433496 ZPR1O75312 459 aa12.87□□□□□ -0.35
RFC4-207ENST00000433496 GYS1P13807 737 aa12.87□□□□□ -0.35
RFC4-207ENST00000433496 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
RFC4-207ENST00000433496 DNAJC10Q8IXB1 793 aa12.87□□□□□ -0.35
RFC4-207ENST00000433496 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
RFC4-207ENST00000433496 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
RFC4-207ENST00000433496 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
RFC4-207ENST00000433496 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
RFC4-207ENST00000433496 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
RFC4-207ENST00000433496 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
RFC4-207ENST00000433496 STARD3NLO95772 234 aa12.85□□□□□ -0.35
RFC4-207ENST00000433496 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
RFC4-207ENST00000433496 DLG5Q8TDM6 1919 aa12.85□□□□□ -0.35
RFC4-207ENST00000433496 GOLGB1Q14789 3259 aaKnown RBP12.85□□□□□ -0.35
RFC4-207ENST00000433496 UTRNP46939 3433 aa12.85□□□□□ -0.35
RFC4-207ENST00000433496 BRCA1P38398 1863 aaKnown RBP12.85□□□□□ -0.35
RFC4-207ENST00000433496 COL15A1P39059 1388 aa12.84□□□□□ -0.35
RFC4-207ENST00000433496 FCHSD2O94868 740 aa12.84□□□□□ -0.35
RFC4-207ENST00000433496 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
RFC4-207ENST00000433496 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
RFC4-207ENST00000433496 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms