RNA–Protein interactions for RNA: ENST00000433463.1

POLR2B-204, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-204ENST00000433463 LINC00116Q8NCU8 138 aa31.71■■■□□ 2.67
POLR2B-204ENST00000433463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.7■■■□□ 2.67
POLR2B-204ENST00000433463 SSFA2P28290 1259 aa31.7■■■□□ 2.67
POLR2B-204ENST00000433463 IL13P35225 146 aa31.7■■■□□ 2.67
POLR2B-204ENST00000433463 ITPK1Q13572 414 aa31.68■■■□□ 2.66
POLR2B-204ENST00000433463 NLGN2Q8NFZ4 835 aa31.68■■■□□ 2.66
POLR2B-204ENST00000433463 GNPATO15228 680 aa31.67■■■□□ 2.66
POLR2B-204ENST00000433463 RBM42Q9BTD8 480 aaKnown RBP31.67■■■□□ 2.66
POLR2B-204ENST00000433463 PER1O15534 1290 aaPredicted RBP31.66■■■□□ 2.66
POLR2B-204ENST00000433463 CC2D1BQ5T0F9 858 aaKnown RBP31.66■■■□□ 2.66
POLR2B-204ENST00000433463 CHD4Q14839 1912 aa31.66■■■□□ 2.66
POLR2B-204ENST00000433463 UBR3Q6ZT12 1888 aa31.64■■■□□ 2.66
POLR2B-204ENST00000433463 AMIGO3Q86WK7 504 aa31.64■■■□□ 2.66
POLR2B-204ENST00000433463 CD2APQ9Y5K6 639 aa31.64■■■□□ 2.66
POLR2B-204ENST00000433463 KDRP35968 1356 aa31.64■■■□□ 2.66
POLR2B-204ENST00000433463 SMIM5Q71RC9 77 aa31.63■■■□□ 2.65
POLR2B-204ENST00000433463 KDM6AO15550 1401 aaPredicted RBP31.61■■■□□ 2.65
POLR2B-204ENST00000433463 RTCBQ9Y3I0 505 aaKnown RBP31.61■■■□□ 2.65
POLR2B-204ENST00000433463 ZNF784Q8NCA9 323 aaPredicted RBP31.6■■■□□ 2.65
POLR2B-204ENST00000433463 GRIN3BO60391 1043 aa31.59■■■□□ 2.65
POLR2B-204ENST00000433463 NFATC2IPQ8NCF5 419 aa31.59■■■□□ 2.65
POLR2B-204ENST00000433463 DIAPH1O60610 1272 aaKnown RBP31.58■■■□□ 2.65
POLR2B-204ENST00000433463 TRAPPC3LQ5T215 181 aa31.58■■■□□ 2.65
POLR2B-204ENST00000433463 HMOX1P09601 288 aa31.57■■■□□ 2.64
POLR2B-204ENST00000433463 AKAP4Q5JQC9 854 aa31.57■■■□□ 2.64
POLR2B-204ENST00000433463 RC3H1Q5TC82 1133 aaKnown RBP31.57■■■□□ 2.64
POLR2B-204ENST00000433463 CNGB1Q14028 1251 aaPredicted RBP31.56■■■□□ 2.64
POLR2B-204ENST00000433463 SLC4A9Q96Q91 983 aa31.56■■■□□ 2.64
POLR2B-204ENST00000433463 PTCD1O75127 700 aaKnown RBP31.55■■■□□ 2.64
POLR2B-204ENST00000433463 NPC1L1Q9UHC9 1359 aa31.54■■■□□ 2.64
POLR2B-204ENST00000433463 ZNF831Q5JPB2 1677 aa31.52■■■□□ 2.64
POLR2B-204ENST00000433463 ADRA2BP18089 450 aa31.52■■■□□ 2.64
POLR2B-204ENST00000433463 CNTNAP4Q9C0A0 1308 aa31.51■■■□□ 2.64
POLR2B-204ENST00000433463 YBX3P16989 372 aaKnown RBP eCLIP31.51■■■□□ 2.63
POLR2B-204ENST00000433463 UTRNP46939 3433 aa31.51■■■□□ 2.63
POLR2B-204ENST00000433463 RPS6KA4O75676 772 aa31.5■■■□□ 2.63
POLR2B-204ENST00000433463 NLGN1Q8N2Q7 840 aa31.5■■■□□ 2.63
POLR2B-204ENST00000433463 RFC4P35249 363 aa31.49■■■□□ 2.63
POLR2B-204ENST00000433463 ARHGEF1Q92888 912 aaKnown RBP31.48■■■□□ 2.63
POLR2B-204ENST00000433463 SLC52A2Q9HAB3 445 aa31.48■■■□□ 2.63
POLR2B-204ENST00000433463 MMP10P09238 476 aa31.47■■■□□ 2.63
POLR2B-204ENST00000433463 SCN11AQ9UI33 1791 aa31.46■■■□□ 2.63
POLR2B-204ENST00000433463 RNMTO43148 476 aaKnown RBP31.46■■■□□ 2.63
POLR2B-204ENST00000433463 LGR6Q9HBX8 967 aa31.46■■■□□ 2.63
POLR2B-204ENST00000433463 U2SURPO15042 1029 aaKnown RBP31.45■■■□□ 2.63
POLR2B-204ENST00000433463 MTHFSDQ2M296 383 aaKnown RBP31.44■■■□□ 2.62
POLR2B-204ENST00000433463 COL5A3P25940 1745 aaPredicted RBP31.44■■■□□ 2.62
POLR2B-204ENST00000433463 CRKLP46109 303 aaKnown RBP31.43■■■□□ 2.62
POLR2B-204ENST00000433463 CFAP53Q96M91 514 aa31.41■■■□□ 2.62
POLR2B-204ENST00000433463 GYS1P13807 737 aa31.39■■■□□ 2.62
POLR2B-204ENST00000433463 MYH14Q7Z406 1995 aaKnown RBP31.39■■■□□ 2.62
POLR2B-204ENST00000433463 PARP3Q9Y6F1 533 aa31.38■■■□□ 2.61
POLR2B-204ENST00000433463 SLC39A6Q13433 755 aa31.36■■■□□ 2.61
POLR2B-204ENST00000433463 GAS2L2Q8NHY3 880 aa31.36■■■□□ 2.61
POLR2B-204ENST00000433463 CCDC87Q9NVE4 849 aa31.36■■■□□ 2.61
POLR2B-204ENST00000433463 WWC3Q9ULE0 1092 aa31.36■■■□□ 2.61
POLR2B-204ENST00000433463 DNAJC10Q8IXB1 793 aa31.35■■■□□ 2.61
POLR2B-204ENST00000433463 GOLGB1Q14789 3259 aaKnown RBP31.34■■■□□ 2.61
POLR2B-204ENST00000433463 COL3A1P02461 1466 aaPredicted RBP31.34■■■□□ 2.61
POLR2B-204ENST00000433463 TGFB2P61812 414 aa31.34■■■□□ 2.61
POLR2B-204ENST00000433463 NUDCQ9Y266 331 aa31.34■■■□□ 2.61
POLR2B-204ENST00000433463 INTS5Q6P9B9 1019 aaKnown RBP31.33■■■□□ 2.61
POLR2B-204ENST00000433463 MRC1P22897 1456 aa31.33■■■□□ 2.61
POLR2B-204ENST00000433463 GNAT3A8MTJ3 354 aa31.32■■■□□ 2.6
POLR2B-204ENST00000433463 TTC5Q8N0Z6 440 aa31.32■■■□□ 2.6
POLR2B-204ENST00000433463 TJP1Q07157 1748 aa31.31■■■□□ 2.6
POLR2B-204ENST00000433463 CICQ96RK0 1608 aaPredicted RBP31.31■■■□□ 2.6
POLR2B-204ENST00000433463 VIRMAQ69YN4 1812 aaKnown RBP31.31■■■□□ 2.6
POLR2B-204ENST00000433463 USP42Q9H9J4 1324 aaKnown RBP31.3■■■□□ 2.6
POLR2B-204ENST00000433463 ZPR1O75312 459 aa31.3■■■□□ 2.6
POLR2B-204ENST00000433463 TEFQ10587 303 aa31.3■■■□□ 2.6
POLR2B-204ENST00000433463 SRP68Q9UHB9 627 aaKnown RBP31.3■■■□□ 2.6
POLR2B-204ENST00000433463 GIGYF1O75420 1035 aaPredicted RBP31.29■■■□□ 2.6
POLR2B-204ENST00000433463 VSIG10Q8N0Z9 540 aa31.29■■■□□ 2.6
POLR2B-204ENST00000433463 CYP19A1P11511 503 aaPredicted RBP31.28■■■□□ 2.6
POLR2B-204ENST00000433463 C4AP0C0L4 1744 aa31.27■■■□□ 2.6
POLR2B-204ENST00000433463 C1QTNF8P60827 252 aa31.27■■■□□ 2.6
POLR2B-204ENST00000433463 A0A0G2JLW4 131 aa31.26■■■□□ 2.59
POLR2B-204ENST00000433463 FKBP8Q14318 412 aa31.26■■■□□ 2.59
POLR2B-204ENST00000433463 ADAMTS7Q9UKP4 1686 aa31.25■■■□□ 2.59
POLR2B-204ENST00000433463 C10orf71Q711Q0 1435 aa31.25■■■□□ 2.59
POLR2B-204ENST00000433463 PPP2R1AP30153 589 aa31.25■■■□□ 2.59
POLR2B-204ENST00000433463 PRKAR2BP31323 418 aa31.25■■■□□ 2.59
POLR2B-204ENST00000433463 PXDNLA1KZ92 1463 aa31.25■■■□□ 2.59
POLR2B-204ENST00000433463 SOS1Q07889 1333 aaPredicted RBP31.24■■■□□ 2.59
POLR2B-204ENST00000433463 KIF13BQ9NQT8 1826 aa31.24■■■□□ 2.59
POLR2B-204ENST00000433463 IL17REQ8NFR9 667 aa31.24■■■□□ 2.59
POLR2B-204ENST00000433463 BCS1LQ9Y276 419 aa31.24■■■□□ 2.59
POLR2B-204ENST00000433463 STARD3NLO95772 234 aa31.23■■■□□ 2.59
POLR2B-204ENST00000433463 U2AF1L5P0DN76 240 aaPredicted RBP31.23■■■□□ 2.59
POLR2B-204ENST00000433463 U2AF1Q01081 240 aaKnown RBP eCLIP31.23■■■□□ 2.59
POLR2B-204ENST00000433463 KCPQ6ZWJ8 1503 aa31.23■■■□□ 2.59
POLR2B-204ENST00000433463 DPEP1P16444 411 aa31.22■■■□□ 2.59
POLR2B-204ENST00000433463 USPL1Q5W0Q7 1092 aa31.22■■■□□ 2.59
POLR2B-204ENST00000433463 RSPH6AQ9H0K4 717 aa31.22■■■□□ 2.59
POLR2B-204ENST00000433463 ZBTB1Q9Y2K1 713 aa31.21■■■□□ 2.59
POLR2B-204ENST00000433463 ATP10DQ9P241 1426 aa31.21■■■□□ 2.59
POLR2B-204ENST00000433463 ZNF790Q6PG37 636 aa31.2■■■□□ 2.59
POLR2B-204ENST00000433463 PHACTR3Q96KR7 559 aa31.2■■■□□ 2.59
POLR2B-204ENST00000433463 TEX13AQ9BXU3 409 aaPredicted RBP31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms