RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 COPS6Q7L5N1 327 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 IL16Q14005 1332 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 NPHP3Q7Z494 1330 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 KDM5CP41229 1560 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 MSH6P52701 1360 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 ESPNB1AK53 854 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 MX1P20591 662 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 SMC3Q9UQE7 1217 aa15.06■□□□□ 0
LRRTM1-206ENST00000433224 XAGE3Q8WTP9 111 aa15.05■□□□□ 0
LRRTM1-206ENST00000433224 SF3A1Q15459 793 aaKnown RBP15.05■□□□□ -0
LRRTM1-206ENST00000433224 RBM10P98175 930 aaKnown RBP15.05■□□□□ -0
LRRTM1-206ENST00000433224 PA2G4Q9UQ80 394 aaKnown RBP15.05■□□□□ -0
LRRTM1-206ENST00000433224 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
LRRTM1-206ENST00000433224 RNF20Q5VTR2 975 aa15.04■□□□□ -0
LRRTM1-206ENST00000433224 FMNL2Q96PY5 1086 aa15.04■□□□□ -0
LRRTM1-206ENST00000433224 CDC42BPBQ9Y5S2 1711 aa15.04■□□□□ -0
LRRTM1-206ENST00000433224 EXOC5O00471 708 aa15.03■□□□□ -0
LRRTM1-206ENST00000433224 KCNQ3O43525 872 aa15.03■□□□□ -0
LRRTM1-206ENST00000433224 PRPF40AO75400 957 aaKnown RBP15.03■□□□□ -0
LRRTM1-206ENST00000433224 IP6K1Q92551 441 aa15.03■□□□□ -0
LRRTM1-206ENST00000433224 TBC1D9Q6ZT07 1266 aa15.03■□□□□ -0
LRRTM1-206ENST00000433224 SNRKQ9NRH2 765 aa15.03■□□□□ -0
LRRTM1-206ENST00000433224 KDM5DQ9BY66 1539 aa15.03■□□□□ -0
LRRTM1-206ENST00000433224 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
LRRTM1-206ENST00000433224 CPLX1O14810 134 aa15.02■□□□□ -0
LRRTM1-206ENST00000433224 PPFIA3O75145 1194 aa15.02■□□□□ -0
LRRTM1-206ENST00000433224 RRP12Q5JTH9 1297 aaKnown RBP15.02■□□□□ -0
LRRTM1-206ENST00000433224 TBC1D32Q96NH3 1257 aa15.02■□□□□ -0
LRRTM1-206ENST00000433224 CEP126Q9P2H0 1117 aa15.02■□□□□ -0
LRRTM1-206ENST00000433224 TRPM2O94759 1503 aa15.02■□□□□ -0
LRRTM1-206ENST00000433224 NPC1L1Q9UHC9 1359 aa15.02■□□□□ -0
LRRTM1-206ENST00000433224 OTUD7AQ8TE49 926 aaPredicted RBP15.02■□□□□ -0
LRRTM1-206ENST00000433224 NUCB2P80303 420 aa15.02□□□□□ -0.01
LRRTM1-206ENST00000433224 EDC4Q6P2E9 1401 aaKnown RBP15.02□□□□□ -0.01
LRRTM1-206ENST00000433224 PLEKHG3A1L390 1219 aa15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 ZCRB1Q8TBF4 217 aaKnown RBP15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 KIF1BPQ96EK5 621 aa15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 ZBTB40Q9NUA8 1239 aa15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 MPHOSPH8Q99549 860 aa15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 STARD3NLO95772 234 aa15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 NFXL1Q6ZNB6 911 aa15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 TRDNQ13061 729 aa15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 CREBRFQ8IUR6 639 aa15.01□□□□□ -0.01
LRRTM1-206ENST00000433224 PTPRCP08575 1304 aa15□□□□□ -0.01
LRRTM1-206ENST00000433224 UBAP1LF5GYI3 381 aa15□□□□□ -0.01
LRRTM1-206ENST00000433224 CEBPZQ03701 1054 aaKnown RBP15□□□□□ -0.01
LRRTM1-206ENST00000433224 TTC39AQ5SRH9 613 aa15□□□□□ -0.01
LRRTM1-206ENST00000433224 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
LRRTM1-206ENST00000433224 ANKRD13DQ6ZTN6 518 aa15□□□□□ -0.01
LRRTM1-206ENST00000433224 ERC1Q8IUD2 1116 aa15□□□□□ -0.01
LRRTM1-206ENST00000433224 XRCC6P12956 609 aaKnown RBP eCLIP15□□□□□ -0.01
LRRTM1-206ENST00000433224 AKAP4Q5JQC9 854 aa15□□□□□ -0.01
LRRTM1-206ENST00000433224 RALYLQ86SE5 291 aaKnown RBP15□□□□□ -0.01
LRRTM1-206ENST00000433224 BCORL1Q5H9F3 1711 aa14.99□□□□□ -0.01
LRRTM1-206ENST00000433224 K7ELQ4 463 aaPredicted RBP14.99□□□□□ -0.01
LRRTM1-206ENST00000433224 IDH1O75874 414 aaKnown RBP14.99□□□□□ -0.01
LRRTM1-206ENST00000433224 ATP2B1P20020 1258 aa14.99□□□□□ -0.01
LRRTM1-206ENST00000433224 RABEP1Q15276 862 aa14.99□□□□□ -0.01
LRRTM1-206ENST00000433224 HYPKQ9NX55 129 aa14.99□□□□□ -0.01
LRRTM1-206ENST00000433224 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 JAKMIP1Q96N16 626 aaKnown RBP14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 TRMT112Q9UI30 125 aaKnown RBP14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 ABCC3O15438 1527 aa14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 KDM2BQ8NHM5 1336 aa14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 SNRPA1P09661 255 aaKnown RBP14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 C8orf37Q96NL8 207 aa14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 BTG4Q9NY30 223 aa14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 FIBPO43427 364 aa14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 DTNBO60941 627 aa14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 KLHDC4Q8TBB5 520 aa14.98□□□□□ -0.01
LRRTM1-206ENST00000433224 NUCB1Q02818 461 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 CCDC158Q5M9N0 1113 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 ZBTB7BO15156 539 aaPredicted RBP14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 SDSP20132 328 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 METTL24Q5JXM2 366 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 IL17REQ8NFR9 667 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 TNPO1Q92973 898 aaKnown RBP14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 ABCF2Q9UG63 623 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 HECW2Q9P2P5 1572 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 CHL1O00533 1208 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 PRPF40BQ6NWY9 871 aaKnown RBP14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 TBC1D2BQ9UPU7 963 aa14.97□□□□□ -0.01
LRRTM1-206ENST00000433224 LRRFIP1Q32MZ4 808 aaKnown RBP14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 ANKRD44Q8N8A2 993 aa14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 RASSF8Q8NHQ8 419 aa14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 PHF23Q9BUL5 403 aaPredicted RBP14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 PPP1R1BQ9UD71 204 aaPredicted RBP14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 SBNO2Q9Y2G9 1366 aa14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 CLTCL1P53675 1640 aa14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 SSFA2P28290 1259 aa14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 HDAC1Q13547 482 aaPredicted RBP14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 ARHGAP45Q92619 1136 aa14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 RNMTO43148 476 aaKnown RBP14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 BICD2Q8TD16 824 aa14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 TCEANC2Q96MN5 208 aa14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 BCL11BQ9C0K0 894 aaPredicted RBP14.96□□□□□ -0.01
LRRTM1-206ENST00000433224 PIK3R4Q99570 1358 aa14.95□□□□□ -0.02
LRRTM1-206ENST00000433224 PHF14O94880 888 aa14.95□□□□□ -0.02
LRRTM1-206ENST00000433224 CEP85Q6P2H3 762 aa14.95□□□□□ -0.02
LRRTM1-206ENST00000433224 RHPN1Q8TCX5 695 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms