RNA–Protein interactions for RNA: ENST00000433028.6

CHEK2-213, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-213ENST00000433028 KDRP35968 1356 aa18.2■□□□□ 0.5
CHEK2-213ENST00000433028 SSFA2P28290 1259 aa18.2■□□□□ 0.5
CHEK2-213ENST00000433028 AMOTQ4VCS5 1084 aa18.2■□□□□ 0.5
CHEK2-213ENST00000433028 LINC00116Q8NCU8 138 aa18.2■□□□□ 0.5
CHEK2-213ENST00000433028 COL5A3P25940 1745 aaPredicted RBP18.19■□□□□ 0.5
CHEK2-213ENST00000433028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
CHEK2-213ENST00000433028 ITPK1Q13572 414 aa18.19■□□□□ 0.5
CHEK2-213ENST00000433028 ZNF784Q8NCA9 323 aaPredicted RBP18.19■□□□□ 0.5
CHEK2-213ENST00000433028 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
CHEK2-213ENST00000433028 KDM6AO15550 1401 aaPredicted RBP18.18■□□□□ 0.5
CHEK2-213ENST00000433028 VIRMAQ69YN4 1812 aaKnown RBP18.18■□□□□ 0.5
CHEK2-213ENST00000433028 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
CHEK2-213ENST00000433028 AEBP1Q8IUX7 1158 aa18.18■□□□□ 0.5
CHEK2-213ENST00000433028 IL13P35225 146 aa18.17■□□□□ 0.5
CHEK2-213ENST00000433028 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
CHEK2-213ENST00000433028 CD2APQ9Y5K6 639 aa18.17■□□□□ 0.5
CHEK2-213ENST00000433028 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
CHEK2-213ENST00000433028 PHF14O94880 888 aa18.16■□□□□ 0.5
CHEK2-213ENST00000433028 SULT6B1Q6IMI4 303 aa18.16■□□□□ 0.5
CHEK2-213ENST00000433028 MYH14Q7Z406 1995 aaKnown RBP18.16■□□□□ 0.5
CHEK2-213ENST00000433028 SMIM5Q71RC9 77 aa18.15■□□□□ 0.5
CHEK2-213ENST00000433028 GNPATO15228 680 aa18.14■□□□□ 0.49
CHEK2-213ENST00000433028 C1orf141Q5JVX7 400 aa18.14■□□□□ 0.49
CHEK2-213ENST00000433028 PELP1Q8IZL8 1130 aaKnown RBP18.14■□□□□ 0.49
CHEK2-213ENST00000433028 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.49
CHEK2-213ENST00000433028 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.49
CHEK2-213ENST00000433028 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.492e-8■□□□□ 8.6
CHEK2-213ENST00000433028 MTHFSP49914 203 aa18.13■□□□□ 0.49
CHEK2-213ENST00000433028 GRIN3BO60391 1043 aa18.12■□□□□ 0.49
CHEK2-213ENST00000433028 CABP4P57796 275 aa18.12■□□□□ 0.49
CHEK2-213ENST00000433028 KIF13BQ9NQT8 1826 aa18.12■□□□□ 0.49
CHEK2-213ENST00000433028 RC3H1Q5TC82 1133 aaKnown RBP18.11■□□□□ 0.49
CHEK2-213ENST00000433028 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
CHEK2-213ENST00000433028 C4AP0C0L4 1744 aa18.11■□□□□ 0.49
CHEK2-213ENST00000433028 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
CHEK2-213ENST00000433028 CNTNAP4Q9C0A0 1308 aa18.1■□□□□ 0.49
CHEK2-213ENST00000433028 TJP1Q07157 1748 aa18.09■□□□□ 0.49
CHEK2-213ENST00000433028 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
CHEK2-213ENST00000433028 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
CHEK2-213ENST00000433028 ADAMTS7Q9UKP4 1686 aa18.08■□□□□ 0.49
CHEK2-213ENST00000433028 AKAP4Q5JQC9 854 aa18.08■□□□□ 0.49
CHEK2-213ENST00000433028 MRC1P22897 1456 aa18.07■□□□□ 0.48
CHEK2-213ENST00000433028 CC2D1BQ5T0F9 858 aaKnown RBP18.07■□□□□ 0.48
CHEK2-213ENST00000433028 TRAPPC3LQ5T215 181 aa18.07■□□□□ 0.48
CHEK2-213ENST00000433028 RPS6KA4O75676 772 aa18.06■□□□□ 0.48
CHEK2-213ENST00000433028 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
CHEK2-213ENST00000433028 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
CHEK2-213ENST00000433028 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
CHEK2-213ENST00000433028 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
CHEK2-213ENST00000433028 COL3A1P02461 1466 aaPredicted RBP18.05■□□□□ 0.48
CHEK2-213ENST00000433028 MMP10P09238 476 aa18.04■□□□□ 0.48
CHEK2-213ENST00000433028 HMOX1P09601 288 aa18.04■□□□□ 0.48
CHEK2-213ENST00000433028 NLGN1Q8N2Q7 840 aa18.04■□□□□ 0.48
CHEK2-213ENST00000433028 SLC52A2Q9HAB3 445 aa18.03■□□□□ 0.48
CHEK2-213ENST00000433028 N4BP2Q86UW6 1770 aaPredicted RBP18.03■□□□□ 0.48
CHEK2-213ENST00000433028 GYS1P13807 737 aa18.02■□□□□ 0.48
CHEK2-213ENST00000433028 LGR6Q9HBX8 967 aa18.02■□□□□ 0.48
CHEK2-213ENST00000433028 BRCA1P38398 1863 aaKnown RBP18.02■□□□□ 0.48
CHEK2-213ENST00000433028 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.48
CHEK2-213ENST00000433028 RNMTO43148 476 aaKnown RBP18.01■□□□□ 0.47
CHEK2-213ENST00000433028 RFC4P35249 363 aa18.01■□□□□ 0.47
CHEK2-213ENST00000433028 CRKLP46109 303 aaKnown RBP18.01■□□□□ 0.47
CHEK2-213ENST00000433028 MTHFSDQ2M296 383 aaKnown RBP18.01■□□□□ 0.47
CHEK2-213ENST00000433028 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
CHEK2-213ENST00000433028 PXDNLA1KZ92 1463 aa18■□□□□ 0.47
CHEK2-213ENST00000433028 KCPQ6ZWJ8 1503 aa17.99■□□□□ 0.47
CHEK2-213ENST00000433028 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
CHEK2-213ENST00000433028 C1QTNF8P60827 252 aa17.98■□□□□ 0.47
CHEK2-213ENST00000433028 TGFB2P61812 414 aa17.98■□□□□ 0.47
CHEK2-213ENST00000433028 INTS5Q6P9B9 1019 aaKnown RBP17.98■□□□□ 0.47
CHEK2-213ENST00000433028 ADCY9O60503 1353 aa17.98■□□□□ 0.47
CHEK2-213ENST00000433028 USP42Q9H9J4 1324 aaKnown RBP17.97■□□□□ 0.47
CHEK2-213ENST00000433028 DNAJC10Q8IXB1 793 aa17.97■□□□□ 0.47
CHEK2-213ENST00000433028 ATP10DQ9P241 1426 aa17.96■□□□□ 0.47
CHEK2-213ENST00000433028 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
CHEK2-213ENST00000433028 GIGYF1O75420 1035 aaPredicted RBP17.96■□□□□ 0.46
CHEK2-213ENST00000433028 SLC39A6Q13433 755 aa17.96■□□□□ 0.46
CHEK2-213ENST00000433028 CCDC87Q9NVE4 849 aa17.96■□□□□ 0.46
CHEK2-213ENST00000433028 WWC3Q9ULE0 1092 aa17.96■□□□□ 0.46
CHEK2-213ENST00000433028 PARP3Q9Y6F1 533 aa17.96■□□□□ 0.46
CHEK2-213ENST00000433028 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
CHEK2-213ENST00000433028 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
CHEK2-213ENST00000433028 SRP68Q9UHB9 627 aaKnown RBP17.95■□□□□ 0.46
CHEK2-213ENST00000433028 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
CHEK2-213ENST00000433028 VSIG10Q8N0Z9 540 aa17.94■□□□□ 0.46
CHEK2-213ENST00000433028 SOS1Q07889 1333 aaPredicted RBP17.94■□□□□ 0.46
CHEK2-213ENST00000433028 AFDNP55196 1824 aaKnown RBP17.93■□□□□ 0.46
CHEK2-213ENST00000433028 FKBP8Q14318 412 aa17.93■□□□□ 0.46
CHEK2-213ENST00000433028 GAS2L2Q8NHY3 880 aa17.93■□□□□ 0.46
CHEK2-213ENST00000433028 A0A0G2JLW4 131 aa17.92■□□□□ 0.46
CHEK2-213ENST00000433028 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
CHEK2-213ENST00000433028 NRXN2Q9P2S2 1712 aa17.91■□□□□ 0.46
CHEK2-213ENST00000433028 DDR1Q08345 913 aa17.91■□□□□ 0.46
CHEK2-213ENST00000433028 IL17REQ8NFR9 667 aa17.91■□□□□ 0.46
CHEK2-213ENST00000433028 CFAP53Q96M91 514 aa17.91■□□□□ 0.46
CHEK2-213ENST00000433028 COL15A1P39059 1388 aa17.9■□□□□ 0.46
CHEK2-213ENST00000433028 ZPR1O75312 459 aa17.9■□□□□ 0.46
CHEK2-213ENST00000433028 DPEP1P16444 411 aa17.9■□□□□ 0.46
CHEK2-213ENST00000433028 TM4SF1P30408 202 aa17.9■□□□□ 0.46
CHEK2-213ENST00000433028 ZBTB1Q9Y2K1 713 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms