RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 MAP3K5Q99683 1374 aa20.88■□□□□ 0.93
SF1-208ENST00000432725 LOC102724428A0A0B4J2F2 783 aa20.88■□□□□ 0.93
SF1-208ENST00000432725 SIK1P57059 783 aa20.88■□□□□ 0.93
SF1-208ENST00000432725 C5P01031 1676 aa20.87■□□□□ 0.93
SF1-208ENST00000432725 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
SF1-208ENST00000432725 ATG3Q9NT62 314 aa20.87■□□□□ 0.93
SF1-208ENST00000432725 TUBGCP6Q96RT7 1819 aa20.86■□□□□ 0.93
SF1-208ENST00000432725 DCAF8L1A6NGE4 600 aa20.86■□□□□ 0.93
SF1-208ENST00000432725 POLD1P28340 1107 aa20.86■□□□□ 0.93
SF1-208ENST00000432725 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
SF1-208ENST00000432725 COL24A1Q17RW2 1714 aa20.86■□□□□ 0.93
SF1-208ENST00000432725 KDM6AO15550 1401 aaPredicted RBP20.86■□□□□ 0.93
SF1-208ENST00000432725 DIAPH1O60610 1272 aaKnown RBP20.85■□□□□ 0.93
SF1-208ENST00000432725 ZBED9Q6R2W3 1325 aa20.84■□□□□ 0.93
SF1-208ENST00000432725 C1orf141Q5JVX7 400 aa20.84■□□□□ 0.93
SF1-208ENST00000432725 MSH5O43196 834 aa20.83■□□□□ 0.93
SF1-208ENST00000432725 ITPK1Q13572 414 aa20.83■□□□□ 0.93
SF1-208ENST00000432725 LINC00116Q8NCU8 138 aa20.83■□□□□ 0.93
SF1-208ENST00000432725 AK7Q96M32 723 aa20.83■□□□□ 0.93
SF1-208ENST00000432725 C4BP0C0L5 1744 aa20.83■□□□□ 0.92
SF1-208ENST00000432725 ATP6V1AP38606 617 aa20.82■□□□□ 0.92
SF1-208ENST00000432725 CABP4P57796 275 aa20.82■□□□□ 0.92
SF1-208ENST00000432725 TAF1LQ8IZX4 1826 aa20.82■□□□□ 0.92
SF1-208ENST00000432725 AMIGO3Q86WK7 504 aa20.81■□□□□ 0.92
SF1-208ENST00000432725 HMOX1P09601 288 aa20.8■□□□□ 0.92
SF1-208ENST00000432725 AKAP4Q5JQC9 854 aa20.8■□□□□ 0.92
SF1-208ENST00000432725 COL3A1P02461 1466 aaPredicted RBP20.8■□□□□ 0.92
SF1-208ENST00000432725 SSFA2P28290 1259 aa20.79■□□□□ 0.92
SF1-208ENST00000432725 SLC4A9Q96Q91 983 aa20.79■□□□□ 0.92
SF1-208ENST00000432725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.78■□□□□ 0.92
SF1-208ENST00000432725 NFATC2IPQ8NCF5 419 aa20.78■□□□□ 0.92
SF1-208ENST00000432725 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.92
SF1-208ENST00000432725 CFAP53Q96M91 514 aa20.77■□□□□ 0.92
SF1-208ENST00000432725 MSL1Q68DK7 614 aa20.76■□□□□ 0.91
SF1-208ENST00000432725 RBM42Q9BTD8 480 aaKnown RBP20.76■□□□□ 0.91
SF1-208ENST00000432725 ZNF831Q5JPB2 1677 aa20.76■□□□□ 0.91
SF1-208ENST00000432725 GNPATO15228 680 aa20.75■□□□□ 0.91
SF1-208ENST00000432725 PHF14O94880 888 aa20.75■□□□□ 0.91
SF1-208ENST00000432725 MTHFSDQ2M296 383 aaKnown RBP20.75■□□□□ 0.91
SF1-208ENST00000432725 SMIM5Q71RC9 77 aa20.75■□□□□ 0.91
SF1-208ENST00000432725 YY1P25490 414 aa20.74■□□□□ 0.91
SF1-208ENST00000432725 RC3H1Q5TC82 1133 aaKnown RBP20.74■□□□□ 0.91
SF1-208ENST00000432725 LGR6Q9HBX8 967 aa20.74■□□□□ 0.91
SF1-208ENST00000432725 UBR3Q6ZT12 1888 aa20.73■□□□□ 0.91
SF1-208ENST00000432725 KLHL34Q8N239 644 aa20.73■□□□□ 0.91
SF1-208ENST00000432725 NGEFQ8N5V2 710 aa20.73■□□□□ 0.91
SF1-208ENST00000432725 SLC52A2Q9HAB3 445 aa20.73■□□□□ 0.91
SF1-208ENST00000432725 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
SF1-208ENST00000432725 RNMTO43148 476 aaKnown RBP20.72■□□□□ 0.91
SF1-208ENST00000432725 CNTNAP4Q9C0A0 1308 aa20.72■□□□□ 0.91
SF1-208ENST00000432725 PTCD1O75127 700 aaKnown RBP20.71■□□□□ 0.91
SF1-208ENST00000432725 NLGN2Q8NFZ4 835 aa20.71■□□□□ 0.91
SF1-208ENST00000432725 RTCBQ9Y3I0 505 aaKnown RBP20.71■□□□□ 0.91
SF1-208ENST00000432725 MRC1P22897 1456 aa20.7■□□□□ 0.9
SF1-208ENST00000432725 CD2APQ9Y5K6 639 aa20.7■□□□□ 0.9
SF1-208ENST00000432725 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
SF1-208ENST00000432725 RPS6KA4O75676 772 aa20.69■□□□□ 0.9
SF1-208ENST00000432725 ADRA2BP18089 450 aa20.69■□□□□ 0.9
SF1-208ENST00000432725 TRAPPC3LQ5T215 181 aa20.69■□□□□ 0.9
SF1-208ENST00000432725 ADAMTS7Q9UKP4 1686 aa20.68■□□□□ 0.9
SF1-208ENST00000432725 GPR162Q16538 588 aa20.67■□□□□ 0.9
SF1-208ENST00000432725 GAS2L2Q8NHY3 880 aa20.67■□□□□ 0.9
SF1-208ENST00000432725 ADAMTS8Q9UP79 889 aa20.67■□□□□ 0.9
SF1-208ENST00000432725 COL5A3P25940 1745 aaPredicted RBP20.67■□□□□ 0.9
SF1-208ENST00000432725 ARHGEF1Q92888 912 aaKnown RBP20.66■□□□□ 0.9
SF1-208ENST00000432725 NUDCQ9Y266 331 aa20.66■□□□□ 0.9
SF1-208ENST00000432725 CICQ96RK0 1608 aaPredicted RBP20.66■□□□□ 0.9
SF1-208ENST00000432725 CRKLP46109 303 aaKnown RBP20.65■□□□□ 0.9
SF1-208ENST00000432725 RSPH6AQ9H0K4 717 aa20.65■□□□□ 0.9
SF1-208ENST00000432725 GNAT3A8MTJ3 354 aa20.64■□□□□ 0.89
SF1-208ENST00000432725 NLGN1Q8N2Q7 840 aa20.64■□□□□ 0.89
SF1-208ENST00000432725 SLC39A6Q13433 755 aa20.63■□□□□ 0.89
SF1-208ENST00000432725 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
SF1-208ENST00000432725 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
SF1-208ENST00000432725 PHACTR3Q96KR7 559 aa20.63■□□□□ 0.89
SF1-208ENST00000432725 UTRNP46939 3433 aa20.63■□□□□ 0.89
SF1-208ENST00000432725 PRKAR2BP31323 418 aa20.62■□□□□ 0.89
SF1-208ENST00000432725 RFC4P35249 363 aa20.62■□□□□ 0.89
SF1-208ENST00000432725 INTS5Q6P9B9 1019 aaKnown RBP20.62■□□□□ 0.89
SF1-208ENST00000432725 TJP1Q07157 1748 aa20.61■□□□□ 0.89
SF1-208ENST00000432725 FCHSD2O94868 740 aa20.61■□□□□ 0.89
SF1-208ENST00000432725 MMP10P09238 476 aa20.61■□□□□ 0.89
SF1-208ENST00000432725 GYS1P13807 737 aa20.61■□□□□ 0.89
SF1-208ENST00000432725 DNAJC10Q8IXB1 793 aa20.61■□□□□ 0.89
SF1-208ENST00000432725 VSIG10Q8N0Z9 540 aa20.61■□□□□ 0.89
SF1-208ENST00000432725 KCPQ6ZWJ8 1503 aa20.61■□□□□ 0.89
SF1-208ENST00000432725 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
SF1-208ENST00000432725 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.891e-19■■■■■ 60.2
SF1-208ENST00000432725 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
SF1-208ENST00000432725 GRIN3BO60391 1043 aa20.59■□□□□ 0.89
SF1-208ENST00000432725 CYP19A1P11511 503 aaPredicted RBP20.59■□□□□ 0.89
SF1-208ENST00000432725 YBX3P16989 372 aaKnown RBP eCLIP20.59■□□□□ 0.893e-8■■□□□ 11.9
SF1-208ENST00000432725 PNNQ9H307 717 aaKnown RBP20.59■□□□□ 0.89
SF1-208ENST00000432725 CCDC87Q9NVE4 849 aa20.59■□□□□ 0.89
SF1-208ENST00000432725 CEMIPQ8WUJ3 1361 aa20.59■□□□□ 0.89
SF1-208ENST00000432725 TEFQ10587 303 aa20.58■□□□□ 0.89
SF1-208ENST00000432725 MYH14Q7Z406 1995 aaKnown RBP20.57■□□□□ 0.88
SF1-208ENST00000432725 USP42Q9H9J4 1324 aaKnown RBP20.56■□□□□ 0.88
SF1-208ENST00000432725 TTC5Q8N0Z6 440 aa20.56■□□□□ 0.88
SF1-208ENST00000432725 GTF3C3Q9Y5Q9 886 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms