RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 PCGF6Q9BYE7 350 aa13.08□□□□□ -0.32
CDC42-IT1-201ENST00000431803 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
CDC42-IT1-201ENST00000431803 KAT6BQ8WYB5 2073 aa13.08□□□□□ -0.32
CDC42-IT1-201ENST00000431803 LY75O60449 1722 aa13.08□□□□□ -0.32
CDC42-IT1-201ENST00000431803 NCAPD2Q15021 1401 aa13.07□□□□□ -0.32
CDC42-IT1-201ENST00000431803 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
CDC42-IT1-201ENST00000431803 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
CDC42-IT1-201ENST00000431803 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
CDC42-IT1-201ENST00000431803 RAPGEF4Q8WZA2 1011 aa13.06□□□□□ -0.32
CDC42-IT1-201ENST00000431803 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
CDC42-IT1-201ENST00000431803 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
CDC42-IT1-201ENST00000431803 EMILIN1Q9Y6C2 1016 aa13.06□□□□□ -0.32
CDC42-IT1-201ENST00000431803 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
CDC42-IT1-201ENST00000431803 GOLGB1Q14789 3259 aaKnown RBP13.05□□□□□ -0.32
CDC42-IT1-201ENST00000431803 PKD1L3Q7Z443 1732 aa13.05□□□□□ -0.32
CDC42-IT1-201ENST00000431803 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
CDC42-IT1-201ENST00000431803 TIE1P35590 1138 aa13.04□□□□□ -0.32
CDC42-IT1-201ENST00000431803 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
CDC42-IT1-201ENST00000431803 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
CDC42-IT1-201ENST00000431803 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
CDC42-IT1-201ENST00000431803 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
CDC42-IT1-201ENST00000431803 FHDC1Q9C0D6 1143 aaPredicted RBP13.03□□□□□ -0.32
CDC42-IT1-201ENST00000431803 WASHC2AQ641Q2 1341 aa13.03□□□□□ -0.32
CDC42-IT1-201ENST00000431803 MAP3K5Q99683 1374 aa13.03□□□□□ -0.32
CDC42-IT1-201ENST00000431803 CYP27B1O15528 508 aa13.02□□□□□ -0.33
CDC42-IT1-201ENST00000431803 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
CDC42-IT1-201ENST00000431803 KCNQ4P56696 695 aa13.02□□□□□ -0.33
CDC42-IT1-201ENST00000431803 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
CDC42-IT1-201ENST00000431803 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.33
CDC42-IT1-201ENST00000431803 EIF4G2P78344 907 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDC42-IT1-201ENST00000431803 SLC16A10Q8TF71 515 aa13.01□□□□□ -0.33
CDC42-IT1-201ENST00000431803 SYT17Q9BSW7 474 aa13.01□□□□□ -0.33
CDC42-IT1-201ENST00000431803 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
CDC42-IT1-201ENST00000431803 MAP2P11137 1827 aaKnown RBP13□□□□□ -0.33
CDC42-IT1-201ENST00000431803 PPM1GO15355 546 aaPredicted RBP13□□□□□ -0.33
CDC42-IT1-201ENST00000431803 HSPA5P11021 654 aaKnown RBP13□□□□□ -0.33
CDC42-IT1-201ENST00000431803 CHRM1P11229 460 aaPredicted RBP13□□□□□ -0.33
CDC42-IT1-201ENST00000431803 YY1P25490 414 aa13□□□□□ -0.33
CDC42-IT1-201ENST00000431803 ARXQ96QS3 562 aa13□□□□□ -0.33
CDC42-IT1-201ENST00000431803 POLKQ9UBT6 870 aa13□□□□□ -0.33
CDC42-IT1-201ENST00000431803 CCNL1Q9UK58 526 aaPredicted RBP13□□□□□ -0.33
CDC42-IT1-201ENST00000431803 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
CDC42-IT1-201ENST00000431803 TFCP2L1Q9NZI6 479 aa12.99□□□□□ -0.33
CDC42-IT1-201ENST00000431803 C5P01031 1676 aa12.99□□□□□ -0.33
CDC42-IT1-201ENST00000431803 PLEKHG2Q9H7P9 1386 aa12.98□□□□□ -0.33
CDC42-IT1-201ENST00000431803 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
CDC42-IT1-201ENST00000431803 EYA1Q99502 592 aa12.98□□□□□ -0.33
CDC42-IT1-201ENST00000431803 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDC42-IT1-201ENST00000431803 ITGB4P16144 1822 aa12.97□□□□□ -0.33
CDC42-IT1-201ENST00000431803 PALLDQ8WX93 1383 aa12.97□□□□□ -0.33
CDC42-IT1-201ENST00000431803 LHX8Q68G74 356 aa12.97□□□□□ -0.33
CDC42-IT1-201ENST00000431803 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
CDC42-IT1-201ENST00000431803 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
CDC42-IT1-201ENST00000431803 EIF4A2Q14240 407 aaKnown RBP12.96□□□□□ -0.33
CDC42-IT1-201ENST00000431803 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.33
CDC42-IT1-201ENST00000431803 PANK3Q9H999 370 aa12.96□□□□□ -0.33
CDC42-IT1-201ENST00000431803 SPG7Q9UQ90 795 aa12.96□□□□□ -0.33
CDC42-IT1-201ENST00000431803 TAF1LQ8IZX4 1826 aa12.96□□□□□ -0.33
CDC42-IT1-201ENST00000431803 ZNF467Q7Z7K2 595 aaPredicted RBP12.95□□□□□ -0.34
CDC42-IT1-201ENST00000431803 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
CDC42-IT1-201ENST00000431803 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
CDC42-IT1-201ENST00000431803 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
CDC42-IT1-201ENST00000431803 POLD1P28340 1107 aa12.94□□□□□ -0.34
CDC42-IT1-201ENST00000431803 TNNT2P45379 298 aaPredicted RBP12.94□□□□□ -0.34
CDC42-IT1-201ENST00000431803 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
CDC42-IT1-201ENST00000431803 PIGBQ92521 554 aa12.94□□□□□ -0.34
CDC42-IT1-201ENST00000431803 SMARCC1Q92922 1105 aaPredicted RBP12.94□□□□□ -0.34
CDC42-IT1-201ENST00000431803 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
CDC42-IT1-201ENST00000431803 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
CDC42-IT1-201ENST00000431803 PHKG2P15735 406 aa12.93□□□□□ -0.34
CDC42-IT1-201ENST00000431803 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
CDC42-IT1-201ENST00000431803 C7P10643 843 aa12.92□□□□□ -0.34
CDC42-IT1-201ENST00000431803 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
CDC42-IT1-201ENST00000431803 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
CDC42-IT1-201ENST00000431803 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
CDC42-IT1-201ENST00000431803 AMIGO3Q86WK7 504 aa12.9□□□□□ -0.34
CDC42-IT1-201ENST00000431803 FLAD1Q8NFF5 587 aa12.9□□□□□ -0.34
CDC42-IT1-201ENST00000431803 TMOD3Q9NYL9 352 aa12.9□□□□□ -0.34
CDC42-IT1-201ENST00000431803 CHD4Q14839 1912 aa12.9□□□□□ -0.35
CDC42-IT1-201ENST00000431803 LOC102724428A0A0B4J2F2 783 aa12.89□□□□□ -0.35
CDC42-IT1-201ENST00000431803 SIK1P57059 783 aa12.89□□□□□ -0.35
CDC42-IT1-201ENST00000431803 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
CDC42-IT1-201ENST00000431803 NLGN2Q8NFZ4 835 aa12.89□□□□□ -0.35
CDC42-IT1-201ENST00000431803 ASAP1Q9ULH1 1129 aa12.89□□□□□ -0.35
CDC42-IT1-201ENST00000431803 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
CDC42-IT1-201ENST00000431803 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
CDC42-IT1-201ENST00000431803 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
CDC42-IT1-201ENST00000431803 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
CDC42-IT1-201ENST00000431803 AK7Q96M32 723 aa12.88□□□□□ -0.35
CDC42-IT1-201ENST00000431803 KNSTRNQ9Y448 316 aa12.88□□□□□ -0.35
CDC42-IT1-201ENST00000431803 KDRP35968 1356 aa12.88□□□□□ -0.35
CDC42-IT1-201ENST00000431803 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
CDC42-IT1-201ENST00000431803 ZNF831Q5JPB2 1677 aa12.87□□□□□ -0.35
CDC42-IT1-201ENST00000431803 ITPK1Q13572 414 aa12.87□□□□□ -0.35
CDC42-IT1-201ENST00000431803 ZNF784Q8NCA9 323 aaPredicted RBP12.87□□□□□ -0.35
CDC42-IT1-201ENST00000431803 ATG3Q9NT62 314 aa12.87□□□□□ -0.35
CDC42-IT1-201ENST00000431803 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.86□□□□□ -0.35
CDC42-IT1-201ENST00000431803 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
CDC42-IT1-201ENST00000431803 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
CDC42-IT1-201ENST00000431803 SSFA2P28290 1259 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms