RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 HSP90AB1P08238 724 aaKnown RBP20.74■□□□□ 0.91
CSNK1E-208ENST00000431611 PLEKHO1Q53GL0 409 aaPredicted RBP20.74■□□□□ 0.91
CSNK1E-208ENST00000431611 ERVV-2B6SEH9 535 aa20.73■□□□□ 0.91
CSNK1E-208ENST00000431611 C1QTNF8P60827 252 aa20.73■□□□□ 0.91
CSNK1E-208ENST00000431611 AMOTQ4VCS5 1084 aa20.72■□□□□ 0.91
CSNK1E-208ENST00000431611 DCAF5Q96JK2 942 aa20.72■□□□□ 0.91
CSNK1E-208ENST00000431611 KNSTRNQ9Y448 316 aa20.71■□□□□ 0.91
CSNK1E-208ENST00000431611 ZNF530Q6P9A1 599 aaPredicted RBP20.7■□□□□ 0.9
CSNK1E-208ENST00000431611 GIGYF1O75420 1035 aaPredicted RBP20.69■□□□□ 0.9
CSNK1E-208ENST00000431611 RBM42Q9BTD8 480 aaKnown RBP20.69■□□□□ 0.9
CSNK1E-208ENST00000431611 CABP4P57796 275 aa20.68■□□□□ 0.9
CSNK1E-208ENST00000431611 AEBP1Q8IUX7 1158 aa20.68■□□□□ 0.9
CSNK1E-208ENST00000431611 RTCBQ9Y3I0 505 aaKnown RBP20.68■□□□□ 0.9
CSNK1E-208ENST00000431611 UBR3Q6ZT12 1888 aa20.68■□□□□ 0.9
CSNK1E-208ENST00000431611 KDRP35968 1356 aa20.68■□□□□ 0.9
CSNK1E-208ENST00000431611 GOLGB1Q14789 3259 aaKnown RBP20.67■□□□□ 0.9
CSNK1E-208ENST00000431611 SENP3-EIF4A1A0A087X0R7 540 aa20.67■□□□□ 0.9
CSNK1E-208ENST00000431611 MTHFSP49914 203 aa20.67■□□□□ 0.9
CSNK1E-208ENST00000431611 SLC4A9Q96Q91 983 aa20.67■□□□□ 0.9
CSNK1E-208ENST00000431611 C1orf141Q5JVX7 400 aa20.66■□□□□ 0.9
CSNK1E-208ENST00000431611 TRAPPC3LQ5T215 181 aa20.66■□□□□ 0.9
CSNK1E-208ENST00000431611 SULT6B1Q6IMI4 303 aa20.66■□□□□ 0.9
CSNK1E-208ENST00000431611 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
CSNK1E-208ENST00000431611 RC3H1Q5TC82 1133 aaKnown RBP20.65■□□□□ 0.9
CSNK1E-208ENST00000431611 MMP10P09238 476 aa20.64■□□□□ 0.89
CSNK1E-208ENST00000431611 WWC3Q9ULE0 1092 aa20.64■□□□□ 0.89
CSNK1E-208ENST00000431611 IL13P35225 146 aa20.63■□□□□ 0.89
CSNK1E-208ENST00000431611 NLGN1Q8N2Q7 840 aa20.63■□□□□ 0.89
CSNK1E-208ENST00000431611 CNTNAP4Q9C0A0 1308 aa20.62■□□□□ 0.89
CSNK1E-208ENST00000431611 ADRA2BP18089 450 aa20.62■□□□□ 0.89
CSNK1E-208ENST00000431611 AMER1Q5JTC6 1135 aaPredicted RBP20.62■□□□□ 0.89
CSNK1E-208ENST00000431611 NFATC2IPQ8NCF5 419 aa20.62■□□□□ 0.89
CSNK1E-208ENST00000431611 ARHGEF1Q92888 912 aaKnown RBP20.62■□□□□ 0.89
CSNK1E-208ENST00000431611 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
CSNK1E-208ENST00000431611 RPS6KA4O75676 772 aa20.61■□□□□ 0.89
CSNK1E-208ENST00000431611 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
CSNK1E-208ENST00000431611 RFC4P35249 363 aa20.6■□□□□ 0.89
CSNK1E-208ENST00000431611 KIF7Q2M1P5 1343 aa20.59■□□□□ 0.89
CSNK1E-208ENST00000431611 ZNF831Q5JPB2 1677 aa20.58■□□□□ 0.88
CSNK1E-208ENST00000431611 GYS1P13807 737 aa20.57■□□□□ 0.88
CSNK1E-208ENST00000431611 TGFB2P61812 414 aa20.57■□□□□ 0.88
CSNK1E-208ENST00000431611 AKAP4Q5JQC9 854 aa20.57■□□□□ 0.88
CSNK1E-208ENST00000431611 GPBP1L1Q9HC44 474 aaPredicted RBP20.57■□□□□ 0.88
CSNK1E-208ENST00000431611 CRKLP46109 303 aaKnown RBP20.55■□□□□ 0.88
CSNK1E-208ENST00000431611 CCDC87Q9NVE4 849 aa20.55■□□□□ 0.88
CSNK1E-208ENST00000431611 PARP3Q9Y6F1 533 aa20.55■□□□□ 0.88
CSNK1E-208ENST00000431611 ADCY9O60503 1353 aa20.55■□□□□ 0.88
CSNK1E-208ENST00000431611 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
CSNK1E-208ENST00000431611 PXDNLA1KZ92 1463 aa20.54■□□□□ 0.88
CSNK1E-208ENST00000431611 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
CSNK1E-208ENST00000431611 A0A0G2JLW4 131 aa20.53■□□□□ 0.88
CSNK1E-208ENST00000431611 PER1O15534 1290 aaPredicted RBP20.53■□□□□ 0.88
CSNK1E-208ENST00000431611 HMOX1P09601 288 aa20.53■□□□□ 0.88
CSNK1E-208ENST00000431611 SLC52A2Q9HAB3 445 aa20.53■□□□□ 0.88
CSNK1E-208ENST00000431611 COL5A3P25940 1745 aaPredicted RBP20.53■□□□□ 0.88
CSNK1E-208ENST00000431611 C10orf71Q711Q0 1435 aa20.53■□□□□ 0.88
CSNK1E-208ENST00000431611 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
CSNK1E-208ENST00000431611 LGR6Q9HBX8 967 aa20.52■□□□□ 0.88
CSNK1E-208ENST00000431611 BCS1LQ9Y276 419 aa20.52■□□□□ 0.88
CSNK1E-208ENST00000431611 DIAPH1O60610 1272 aaKnown RBP20.51■□□□□ 0.87
CSNK1E-208ENST00000431611 SRP68Q9UHB9 627 aaKnown RBP20.51■□□□□ 0.87
CSNK1E-208ENST00000431611 RNMTO43148 476 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-208ENST00000431611 DPEP1P16444 411 aa20.5■□□□□ 0.87
CSNK1E-208ENST00000431611 INTS5Q6P9B9 1019 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-208ENST00000431611 USP42Q9H9J4 1324 aaKnown RBP20.5■□□□□ 0.87
CSNK1E-208ENST00000431611 DNAJC10Q8IXB1 793 aa20.49■□□□□ 0.87
CSNK1E-208ENST00000431611 FKBP8Q14318 412 aa20.48■□□□□ 0.87
CSNK1E-208ENST00000431611 MTHFSDQ2M296 383 aaKnown RBP20.48■□□□□ 0.87
CSNK1E-208ENST00000431611 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
CSNK1E-208ENST00000431611 FCHSD2O94868 740 aa20.47■□□□□ 0.87
CSNK1E-208ENST00000431611 SLC39A6Q13433 755 aa20.47■□□□□ 0.87
CSNK1E-208ENST00000431611 ARHGAP27Q6ZUM4 889 aa20.47■□□□□ 0.87
CSNK1E-208ENST00000431611 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
CSNK1E-208ENST00000431611 KIF13BQ9NQT8 1826 aa20.46■□□□□ 0.87
CSNK1E-208ENST00000431611 CYP19A1P11511 503 aaPredicted RBP20.45■□□□□ 0.86
CSNK1E-208ENST00000431611 DDR1Q08345 913 aa20.45■□□□□ 0.86
CSNK1E-208ENST00000431611 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
CSNK1E-208ENST00000431611 TJP1Q07157 1748 aa20.44■□□□□ 0.86
CSNK1E-208ENST00000431611 MRC1P22897 1456 aa20.44■□□□□ 0.86
CSNK1E-208ENST00000431611 SCN11AQ9UI33 1791 aa20.44■□□□□ 0.86
CSNK1E-208ENST00000431611 ZPR1O75312 459 aa20.44■□□□□ 0.86
CSNK1E-208ENST00000431611 KCNA3P22001 575 aa20.44■□□□□ 0.86
CSNK1E-208ENST00000431611 PIM2Q9P1W9 311 aa20.44■□□□□ 0.86
CSNK1E-208ENST00000431611 KIAA1551Q9HCM1 1747 aa20.44■□□□□ 0.86
CSNK1E-208ENST00000431611 USPL1Q5W0Q7 1092 aa20.43■□□□□ 0.86
CSNK1E-208ENST00000431611 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
CSNK1E-208ENST00000431611 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
CSNK1E-208ENST00000431611 N4BP2Q86UW6 1770 aaPredicted RBP20.42■□□□□ 0.86
CSNK1E-208ENST00000431611 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
CSNK1E-208ENST00000431611 TM4SF1P30408 202 aa20.42■□□□□ 0.86
CSNK1E-208ENST00000431611 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
CSNK1E-208ENST00000431611 KIF3CO14782 793 aa20.41■□□□□ 0.86
CSNK1E-208ENST00000431611 VSIG10Q8N0Z9 540 aa20.41■□□□□ 0.86
CSNK1E-208ENST00000431611 HSPA6P17066 643 aa20.4■□□□□ 0.86
CSNK1E-208ENST00000431611 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
CSNK1E-208ENST00000431611 NARFQ9UHQ1 456 aa20.4■□□□□ 0.86
CSNK1E-208ENST00000431611 ZBTB1Q9Y2K1 713 aa20.4■□□□□ 0.86
CSNK1E-208ENST00000431611 KCPQ6ZWJ8 1503 aa20.39■□□□□ 0.85
CSNK1E-208ENST00000431611 CHRNA5P30532 468 aa20.39■□□□□ 0.85
CSNK1E-208ENST00000431611 TTC5Q8N0Z6 440 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms