RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 AEBP1Q8IUX7 1158 aa22.07■■□□□ 1.12
AC055876.3-201ENST00000431496 PHF14O94880 888 aa22.06■■□□□ 1.12
AC055876.3-201ENST00000431496 ZNF530Q6P9A1 599 aaPredicted RBP22.06■■□□□ 1.12
AC055876.3-201ENST00000431496 CHD4Q14839 1912 aa22.06■■□□□ 1.12
AC055876.3-201ENST00000431496 SSFA2P28290 1259 aa22.05■■□□□ 1.12
AC055876.3-201ENST00000431496 IL13P35225 146 aa22.05■■□□□ 1.12
AC055876.3-201ENST00000431496 PELP1Q8IZL8 1130 aaKnown RBP22.05■■□□□ 1.12
AC055876.3-201ENST00000431496 SULT6B1Q6IMI4 303 aa22.04■■□□□ 1.12
AC055876.3-201ENST00000431496 CD2APQ9Y5K6 639 aa22.04■■□□□ 1.12
AC055876.3-201ENST00000431496 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
AC055876.3-201ENST00000431496 PER1O15534 1290 aaPredicted RBP22.03■■□□□ 1.12
AC055876.3-201ENST00000431496 GNPATO15228 680 aa22.02■■□□□ 1.12
AC055876.3-201ENST00000431496 MTHFSP49914 203 aa22.02■■□□□ 1.12
AC055876.3-201ENST00000431496 CABP4P57796 275 aa22.02■■□□□ 1.12
AC055876.3-201ENST00000431496 UBR3Q6ZT12 1888 aa22.02■■□□□ 1.12
AC055876.3-201ENST00000431496 C1orf141Q5JVX7 400 aa22.01■■□□□ 1.11
AC055876.3-201ENST00000431496 SLC4A9Q96Q91 983 aa22.01■■□□□ 1.11
AC055876.3-201ENST00000431496 RBM42Q9BTD8 480 aaKnown RBP22.01■■□□□ 1.11
AC055876.3-201ENST00000431496 KDRP35968 1356 aa22■■□□□ 1.11
AC055876.3-201ENST00000431496 GRIN3BO60391 1043 aa22■■□□□ 1.11
AC055876.3-201ENST00000431496 YBX3P16989 372 aaKnown RBP eCLIP22■■□□□ 1.11
AC055876.3-201ENST00000431496 KDM6AO15550 1401 aaPredicted RBP21.99■■□□□ 1.11
AC055876.3-201ENST00000431496 RC3H1Q5TC82 1133 aaKnown RBP21.97■■□□□ 1.11
AC055876.3-201ENST00000431496 NFATC2IPQ8NCF5 419 aa21.97■■□□□ 1.11
AC055876.3-201ENST00000431496 CC2D1BQ5T0F9 858 aaKnown RBP21.96■■□□□ 1.11
AC055876.3-201ENST00000431496 TRAPPC3LQ5T215 181 aa21.96■■□□□ 1.11
AC055876.3-201ENST00000431496 RTCBQ9Y3I0 505 aaKnown RBP21.96■■□□□ 1.11
AC055876.3-201ENST00000431496 PTCD1O75127 700 aaKnown RBP21.93■■□□□ 1.1
AC055876.3-201ENST00000431496 AKAP4Q5JQC9 854 aa21.93■■□□□ 1.1
AC055876.3-201ENST00000431496 CNTNAP4Q9C0A0 1308 aa21.93■■□□□ 1.1
AC055876.3-201ENST00000431496 RPS6KA4O75676 772 aa21.92■■□□□ 1.1
AC055876.3-201ENST00000431496 ADRA2BP18089 450 aa21.92■■□□□ 1.1
AC055876.3-201ENST00000431496 ARHGEF1Q92888 912 aaKnown RBP21.92■■□□□ 1.1
AC055876.3-201ENST00000431496 ZNF831Q5JPB2 1677 aa21.91■■□□□ 1.1
AC055876.3-201ENST00000431496 DIAPH1O60610 1272 aaKnown RBP21.91■■□□□ 1.1
AC055876.3-201ENST00000431496 HMOX1P09601 288 aa21.91■■□□□ 1.1
AC055876.3-201ENST00000431496 NLGN1Q8N2Q7 840 aa21.91■■□□□ 1.1
AC055876.3-201ENST00000431496 MMP10P09238 476 aa21.9■■□□□ 1.1
AC055876.3-201ENST00000431496 LGR6Q9HBX8 967 aa21.9■■□□□ 1.1
AC055876.3-201ENST00000431496 NPC1L1Q9UHC9 1359 aa21.88■■□□□ 1.09
AC055876.3-201ENST00000431496 RFC4P35249 363 aa21.88■■□□□ 1.09
AC055876.3-201ENST00000431496 SLC52A2Q9HAB3 445 aa21.88■■□□□ 1.09
AC055876.3-201ENST00000431496 MYH14Q7Z406 1995 aaKnown RBP21.87■■□□□ 1.09
AC055876.3-201ENST00000431496 RNMTO43148 476 aaKnown RBP21.86■■□□□ 1.09
AC055876.3-201ENST00000431496 GYS1P13807 737 aa21.86■■□□□ 1.09
AC055876.3-201ENST00000431496 CRKLP46109 303 aaKnown RBP21.86■■□□□ 1.09
AC055876.3-201ENST00000431496 MTHFSDQ2M296 383 aaKnown RBP21.86■■□□□ 1.09
AC055876.3-201ENST00000431496 CNGB1Q14028 1251 aaPredicted RBP21.85■■□□□ 1.09
AC055876.3-201ENST00000431496 COL5A3P25940 1745 aaPredicted RBP21.85■■□□□ 1.09
AC055876.3-201ENST00000431496 SCN11AQ9UI33 1791 aa21.84■■□□□ 1.09
AC055876.3-201ENST00000431496 C1QTNF8P60827 252 aa21.84■■□□□ 1.09
AC055876.3-201ENST00000431496 INTS5Q6P9B9 1019 aaKnown RBP21.83■■□□□ 1.09
AC055876.3-201ENST00000431496 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.09
AC055876.3-201ENST00000431496 TGFB2P61812 414 aa21.82■■□□□ 1.08
AC055876.3-201ENST00000431496 SLC39A6Q13433 755 aa21.81■■□□□ 1.08
AC055876.3-201ENST00000431496 DNAJC10Q8IXB1 793 aa21.81■■□□□ 1.08
AC055876.3-201ENST00000431496 PARP3Q9Y6F1 533 aa21.81■■□□□ 1.08
AC055876.3-201ENST00000431496 U2SURPO15042 1029 aaKnown RBP21.8■■□□□ 1.08
AC055876.3-201ENST00000431496 GIGYF1O75420 1035 aaPredicted RBP21.8■■□□□ 1.08
AC055876.3-201ENST00000431496 CCDC87Q9NVE4 849 aa21.8■■□□□ 1.08
AC055876.3-201ENST00000431496 SRP68Q9UHB9 627 aaKnown RBP21.8■■□□□ 1.08
AC055876.3-201ENST00000431496 A0A0G2JLW4 131 aa21.78■■□□□ 1.08
AC055876.3-201ENST00000431496 CYP19A1P11511 503 aaPredicted RBP21.78■■□□□ 1.08
AC055876.3-201ENST00000431496 FKBP8Q14318 412 aa21.78■■□□□ 1.08
AC055876.3-201ENST00000431496 USP42Q9H9J4 1324 aaKnown RBP21.78■■□□□ 1.08
AC055876.3-201ENST00000431496 COL3A1P02461 1466 aaPredicted RBP21.77■■□□□ 1.08
AC055876.3-201ENST00000431496 CICQ96RK0 1608 aaPredicted RBP21.77■■□□□ 1.08
AC055876.3-201ENST00000431496 TJP1Q07157 1748 aa21.77■■□□□ 1.08
AC055876.3-201ENST00000431496 PXDNLA1KZ92 1463 aa21.77■■□□□ 1.07
AC055876.3-201ENST00000431496 MRC1P22897 1456 aa21.77■■□□□ 1.07
AC055876.3-201ENST00000431496 C10orf71Q711Q0 1435 aa21.76■■□□□ 1.07
AC055876.3-201ENST00000431496 VSIG10Q8N0Z9 540 aa21.76■■□□□ 1.07
AC055876.3-201ENST00000431496 ATP10DQ9P241 1426 aa21.76■■□□□ 1.07
AC055876.3-201ENST00000431496 KIF13BQ9NQT8 1826 aa21.76■■□□□ 1.07
AC055876.3-201ENST00000431496 DPEP1P16444 411 aa21.75■■□□□ 1.07
AC055876.3-201ENST00000431496 IL17REQ8NFR9 667 aa21.75■■□□□ 1.07
AC055876.3-201ENST00000431496 GNAT3A8MTJ3 354 aa21.74■■□□□ 1.07
AC055876.3-201ENST00000431496 GAS2L2Q8NHY3 880 aa21.74■■□□□ 1.07
AC055876.3-201ENST00000431496 C4AP0C0L4 1744 aa21.74■■□□□ 1.07
AC055876.3-201ENST00000431496 SOS1Q07889 1333 aaPredicted RBP21.74■■□□□ 1.07
AC055876.3-201ENST00000431496 ADAMTS7Q9UKP4 1686 aa21.73■■□□□ 1.07
AC055876.3-201ENST00000431496 ZPR1O75312 459 aa21.73■■□□□ 1.07
AC055876.3-201ENST00000431496 TM4SF1P30408 202 aa21.73■■□□□ 1.07
AC055876.3-201ENST00000431496 DDR1Q08345 913 aa21.73■■□□□ 1.07
AC055876.3-201ENST00000431496 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
AC055876.3-201ENST00000431496 BCS1LQ9Y276 419 aa21.73■■□□□ 1.07
AC055876.3-201ENST00000431496 ADCY9O60503 1353 aa21.73■■□□□ 1.07
AC055876.3-201ENST00000431496 KCPQ6ZWJ8 1503 aa21.72■■□□□ 1.07
AC055876.3-201ENST00000431496 SENP3-EIF4A1A0A087X0R7 540 aa21.72■■□□□ 1.07
AC055876.3-201ENST00000431496 USPL1Q5W0Q7 1092 aa21.72■■□□□ 1.07
AC055876.3-201ENST00000431496 GPBP1L1Q9HC44 474 aaPredicted RBP21.72■■□□□ 1.07
AC055876.3-201ENST00000431496 VIRMAQ69YN4 1812 aaKnown RBP21.71■■□□□ 1.07
AC055876.3-201ENST00000431496 KCNA3P22001 575 aa21.71■■□□□ 1.07
AC055876.3-201ENST00000431496 TEFQ10587 303 aa21.71■■□□□ 1.07
AC055876.3-201ENST00000431496 TTC5Q8N0Z6 440 aa21.71■■□□□ 1.07
AC055876.3-201ENST00000431496 PHACTR3Q96KR7 559 aa21.71■■□□□ 1.07
AC055876.3-201ENST00000431496 NARFQ9UHQ1 456 aa21.71■■□□□ 1.07
AC055876.3-201ENST00000431496 ZBTB1Q9Y2K1 713 aa21.71■■□□□ 1.07
AC055876.3-201ENST00000431496 N4BP2Q86UW6 1770 aaPredicted RBP21.71■■□□□ 1.07
AC055876.3-201ENST00000431496 KIAA1551Q9HCM1 1747 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms