RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 GRIP2Q9C0E4 1043 aa5.21□□□□□ -1.58
CDC40-204ENST00000431461 PAX4O43316 350 aa5.2□□□□□ -1.58
CDC40-204ENST00000431461 AMPD1P23109 780 aa5.2□□□□□ -1.58
CDC40-204ENST00000431461 CHRNA4P43681 627 aa5.2□□□□□ -1.58
CDC40-204ENST00000431461 POU4F2Q12837 409 aa5.2□□□□□ -1.58
CDC40-204ENST00000431461 SUV39H2Q9H5I1 410 aa5.2□□□□□ -1.58
CDC40-204ENST00000431461 SLC24A3Q9HC58 644 aa5.2□□□□□ -1.58
CDC40-204ENST00000431461 ATP1B4Q9UN42 357 aaPredicted RBP5.2□□□□□ -1.58
CDC40-204ENST00000431461 GATA4P43694 442 aa5.19□□□□□ -1.58
CDC40-204ENST00000431461 LAMC2Q13753 1193 aa5.19□□□□□ -1.58
CDC40-204ENST00000431461 SKIV2LQ15477 1246 aaKnown RBP5.19□□□□□ -1.58
CDC40-204ENST00000431461 SLC27A3Q5K4L6 730 aa5.19□□□□□ -1.58
CDC40-204ENST00000431461 MCTP1Q6DN14 999 aa5.19□□□□□ -1.58
CDC40-204ENST00000431461 TAS1R3Q7RTX0 852 aa5.19□□□□□ -1.58
CDC40-204ENST00000431461 DZIP3Q86Y13 1208 aaKnown RBP5.19□□□□□ -1.58
CDC40-204ENST00000431461 BTBD6Q96KE9 485 aa5.19□□□□□ -1.58
CDC40-204ENST00000431461 NLRP3Q96P20 1036 aa5.19□□□□□ -1.58
CDC40-204ENST00000431461 TIMMDC1Q9NPL8 285 aa5.19□□□□□ -1.58
CDC40-204ENST00000431461 A0A1W2PRU2 124 aa5.18□□□□□ -1.58
CDC40-204ENST00000431461 DGKGP49619 791 aa5.18□□□□□ -1.58
CDC40-204ENST00000431461 LRP8Q14114 963 aa5.18□□□□□ -1.58
CDC40-204ENST00000431461 ATXN7L1Q9ULK2 861 aaPredicted RBP5.18□□□□□ -1.58
CDC40-204ENST00000431461 EPXP11678 715 aa5.17□□□□□ -1.58
CDC40-204ENST00000431461 CLN3Q13286 438 aa5.17□□□□□ -1.58
CDC40-204ENST00000431461 FZD5Q13467 585 aa5.17□□□□□ -1.58
CDC40-204ENST00000431461 FBXO31Q5XUX0 539 aaPredicted RBP5.17□□□□□ -1.58
CDC40-204ENST00000431461 EPS8L1Q8TE68 723 aa5.17□□□□□ -1.58
CDC40-204ENST00000431461 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.17□□□□□ -1.58
CDC40-204ENST00000431461 KRTAP17-1Q9BYP8 105 aa5.17□□□□□ -1.58
CDC40-204ENST00000431461 WASLO00401 505 aaPredicted RBP5.16□□□□□ -1.58
CDC40-204ENST00000431461 SPATA31C1P0DKV0 1188 aa5.16□□□□□ -1.58
CDC40-204ENST00000431461 ARAFP10398 606 aa5.16□□□□□ -1.58
CDC40-204ENST00000431461 RSPO4Q2I0M5 234 aaPredicted RBP5.16□□□□□ -1.58
CDC40-204ENST00000431461 NKAPLQ5M9Q1 402 aa5.16□□□□□ -1.58
CDC40-204ENST00000431461 GGA1Q9UJY5 639 aa5.16□□□□□ -1.58
CDC40-204ENST00000431461 A0A1B0GTH6 734 aa5.15□□□□□ -1.59
CDC40-204ENST00000431461 BMP4P12644 408 aa5.15□□□□□ -1.59
CDC40-204ENST00000431461 ERVK-9P63128 1117 aa5.15□□□□□ -1.59
CDC40-204ENST00000431461 SH3D19Q5HYK7 790 aa5.15□□□□□ -1.59
CDC40-204ENST00000431461 CYP2U1Q7Z449 544 aa5.15□□□□□ -1.59
CDC40-204ENST00000431461 GPAMQ9HCL2 828 aa5.15□□□□□ -1.59
CDC40-204ENST00000431461 THBS1P07996 1170 aa5.14□□□□□ -1.59
CDC40-204ENST00000431461 UBAP2LQ14157 1087 aaKnown RBP5.14□□□□□ -1.59
CDC40-204ENST00000431461 CC2D2BQ6DHV5 1058 aa5.14□□□□□ -1.59
CDC40-204ENST00000431461 PROCA1Q8NCQ7 364 aaPredicted RBP5.14□□□□□ -1.59
CDC40-204ENST00000431461 FMNL2Q96PY5 1086 aa5.14□□□□□ -1.59
CDC40-204ENST00000431461 AVENQ9NQS1 362 aaPredicted RBP5.14□□□□□ -1.59
CDC40-204ENST00000431461 SPDYE3A6NKU9 549 aa5.13□□□□□ -1.59
CDC40-204ENST00000431461 AP1G2O75843 785 aa5.13□□□□□ -1.59
CDC40-204ENST00000431461 CSB-PGBD3P0DP91 1061 aa5.13□□□□□ -1.59
CDC40-204ENST00000431461 RNF20Q5VTR2 975 aa5.13□□□□□ -1.59
CDC40-204ENST00000431461 RNF135Q8IUD6 432 aa5.13□□□□□ -1.59
CDC40-204ENST00000431461 PGBD3Q8N328 593 aa5.13□□□□□ -1.59
CDC40-204ENST00000431461 NDFIP2Q9NV92 336 aa5.13□□□□□ -1.59
CDC40-204ENST00000431461 C2CD2LO14523 706 aa5.12□□□□□ -1.59
CDC40-204ENST00000431461 DYRK3O43781 588 aa5.12□□□□□ -1.59
CDC40-204ENST00000431461 FGFR3P22607 806 aa5.12□□□□□ -1.59
CDC40-204ENST00000431461 PHKA2P46019 1235 aa5.12□□□□□ -1.59
CDC40-204ENST00000431461 EFHC2Q5JST6 749 aa5.12□□□□□ -1.59
CDC40-204ENST00000431461 HMX1Q9NP08 348 aaPredicted RBP5.12□□□□□ -1.59
CDC40-204ENST00000431461 MCCD1P59942 119 aaPredicted RBP5.11□□□□□ -1.59
CDC40-204ENST00000431461 ZNF592Q92610 1267 aa5.11□□□□□ -1.59
CDC40-204ENST00000431461 DDRGK1Q96HY6 314 aa5.11□□□□□ -1.59
CDC40-204ENST00000431461 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
CDC40-204ENST00000431461 RAB6BQ9NRW1 208 aa5.11□□□□□ -1.59
CDC40-204ENST00000431461 GIGYF1O75420 1035 aaPredicted RBP5.1□□□□□ -1.59
CDC40-204ENST00000431461 FIGNL1Q6PIW4 674 aa5.1□□□□□ -1.59
CDC40-204ENST00000431461 CHSY3Q70JA7 882 aa5.1□□□□□ -1.59
CDC40-204ENST00000431461 ESYT1Q9BSJ8 1104 aa5.1□□□□□ -1.59
CDC40-204ENST00000431461 FAM117AQ9C073 453 aa5.1□□□□□ -1.59
CDC40-204ENST00000431461 ARHGEF10LQ9HCE6 1279 aa5.1□□□□□ -1.59
CDC40-204ENST00000431461 PCDHB9Q9Y5E1 797 aa5.1□□□□□ -1.59
CDC40-204ENST00000431461 COL17A1Q9UMD9 1497 aaPredicted RBP5.09□□□□□ -1.59
CDC40-204ENST00000431461 TRAK2O60296 914 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 GNRH1P01148 92 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 ADH6P28332 368 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 GTF2E1P29083 439 aaPredicted RBP5.09□□□□□ -1.59
CDC40-204ENST00000431461 CTBSQ01459 385 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 PRSS36Q5K4E3 855 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 FAM182BQ5T319 152 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 KRTAP4-5Q9BYR2 181 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 CRISPLD1Q9H336 500 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 KDM4CQ9H3R0 1056 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 TPSG1Q9NRR2 321 aa5.09□□□□□ -1.59
CDC40-204ENST00000431461 ARID1BQ8NFD5 2236 aaPredicted RBP5.08□□□□□ -1.6
CDC40-204ENST00000431461 NEURL1BA8MQ27 555 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 HYAL3O43820 417 aaPredicted RBP5.08□□□□□ -1.6
CDC40-204ENST00000431461 BNIP3LO60238 219 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 APBA3O96018 575 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 USP17L8P0C7I0 530 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 SCTRP47872 440 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 PRRT3Q5FWE3 981 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 ABHD17AQ96GS6 310 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 NACC1Q96RE7 527 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 PLVAPQ9BX97 442 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 ESF1Q9H501 851 aaKnown RBP5.08□□□□□ -1.6
CDC40-204ENST00000431461 RUBCNLQ9H714 662 aa5.08□□□□□ -1.6
CDC40-204ENST00000431461 H2AFB1P0C5Y9 115 aa5.07□□□□□ -1.6
CDC40-204ENST00000431461 H2AFB2P0C5Z0 115 aa5.07□□□□□ -1.6
CDC40-204ENST00000431461 CENPCQ03188 943 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms