RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 PCDH11XQ9BZA7 1347 aa20.51■□□□□ 0.87
PTCD1-204ENST00000430982 PCDH11YQ9BZA8 1340 aa20.51■□□□□ 0.87
PTCD1-204ENST00000430982 IL13P35225 146 aa20.5■□□□□ 0.87
PTCD1-204ENST00000430982 DNAJC5GQ8N7S2 189 aa20.49■□□□□ 0.87
PTCD1-204ENST00000430982 APLP1P51693 650 aa20.48■□□□□ 0.87
PTCD1-204ENST00000430982 SPG7Q9UQ90 795 aa20.48■□□□□ 0.87
PTCD1-204ENST00000430982 CYP27B1O15528 508 aa20.47■□□□□ 0.87
PTCD1-204ENST00000430982 DIAPH1O60610 1272 aaKnown RBP20.47■□□□□ 0.87
PTCD1-204ENST00000430982 SSFA2P28290 1259 aa20.47■□□□□ 0.87
PTCD1-204ENST00000430982 SULT6B1Q6IMI4 303 aa20.47■□□□□ 0.87
PTCD1-204ENST00000430982 AEBP1Q8IUX7 1158 aa20.47■□□□□ 0.87
PTCD1-204ENST00000430982 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
PTCD1-204ENST00000430982 AK7Q96M32 723 aa20.47■□□□□ 0.87
PTCD1-204ENST00000430982 PXDNLA1KZ92 1463 aa20.46■□□□□ 0.87
PTCD1-204ENST00000430982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.46■□□□□ 0.87
PTCD1-204ENST00000430982 PPP2R1AP30153 589 aa20.46■□□□□ 0.87
PTCD1-204ENST00000430982 MPRIPQ6WCQ1 1025 aa20.45■□□□□ 0.86
PTCD1-204ENST00000430982 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
PTCD1-204ENST00000430982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.86
PTCD1-204ENST00000430982 TOMM70O94826 608 aa20.43■□□□□ 0.86
PTCD1-204ENST00000430982 SMIM5Q71RC9 77 aa20.43■□□□□ 0.86
PTCD1-204ENST00000430982 WWC3Q9ULE0 1092 aa20.43■□□□□ 0.86
PTCD1-204ENST00000430982 WDR90Q96KV7 1748 aa20.43■□□□□ 0.86
PTCD1-204ENST00000430982 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
PTCD1-204ENST00000430982 PHF14O94880 888 aa20.42■□□□□ 0.86
PTCD1-204ENST00000430982 HMOX1P09601 288 aa20.42■□□□□ 0.86
PTCD1-204ENST00000430982 NKX1-1Q15270 411 aaPredicted RBP20.42■□□□□ 0.86
PTCD1-204ENST00000430982 PLEKHO1Q53GL0 409 aaPredicted RBP20.42■□□□□ 0.86
PTCD1-204ENST00000430982 PIGBQ92521 554 aa20.42■□□□□ 0.86
PTCD1-204ENST00000430982 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
PTCD1-204ENST00000430982 COL3A1P02461 1466 aaPredicted RBP20.41■□□□□ 0.86
PTCD1-204ENST00000430982 KDRP35968 1356 aa20.4■□□□□ 0.86
PTCD1-204ENST00000430982 BRCA1P38398 1863 aaKnown RBP20.4■□□□□ 0.86
PTCD1-204ENST00000430982 C10orf71Q711Q0 1435 aa20.4■□□□□ 0.86
PTCD1-204ENST00000430982 IFNL2Q8IZJ0 200 aa20.4■□□□□ 0.86
PTCD1-204ENST00000430982 N4BP2Q86UW6 1770 aaPredicted RBP20.39■□□□□ 0.86
PTCD1-204ENST00000430982 PLEKHG2Q9H7P9 1386 aa20.39■□□□□ 0.85
PTCD1-204ENST00000430982 LOC102724428A0A0B4J2F2 783 aa20.39■□□□□ 0.85
PTCD1-204ENST00000430982 PHKG2P15735 406 aa20.39■□□□□ 0.85
PTCD1-204ENST00000430982 SIK1P57059 783 aa20.39■□□□□ 0.85
PTCD1-204ENST00000430982 AMOTQ4VCS5 1084 aa20.39■□□□□ 0.85
PTCD1-204ENST00000430982 ZNF530Q6P9A1 599 aaPredicted RBP20.39■□□□□ 0.85
PTCD1-204ENST00000430982 ZNF316A6NFI3 1004 aaPredicted RBP20.38■□□□□ 0.85
PTCD1-204ENST00000430982 TGFB2P61812 414 aa20.37■□□□□ 0.85
PTCD1-204ENST00000430982 RALBP1Q15311 655 aa20.37■□□□□ 0.85
PTCD1-204ENST00000430982 ZNF831Q5JPB2 1677 aa20.37■□□□□ 0.85
PTCD1-204ENST00000430982 ITPK1Q13572 414 aa20.36■□□□□ 0.85
PTCD1-204ENST00000430982 NUDCQ9Y266 331 aa20.36■□□□□ 0.85
PTCD1-204ENST00000430982 MMP10P09238 476 aa20.35■□□□□ 0.85
PTCD1-204ENST00000430982 JMYQ8N9B5 988 aa20.35■□□□□ 0.85
PTCD1-204ENST00000430982 NMRK2Q9NPI5 230 aa20.35■□□□□ 0.85
PTCD1-204ENST00000430982 ARFGEF1Q9Y6D6 1849 aa20.34■□□□□ 0.85
PTCD1-204ENST00000430982 GNPATO15228 680 aa20.34■□□□□ 0.85
PTCD1-204ENST00000430982 C1orf141Q5JVX7 400 aa20.34■□□□□ 0.85
PTCD1-204ENST00000430982 RBM46Q8TBY0 533 aaKnown RBP20.34■□□□□ 0.85
PTCD1-204ENST00000430982 C4AP0C0L4 1744 aa20.33■□□□□ 0.85
PTCD1-204ENST00000430982 HSP90AB1P08238 724 aaKnown RBP20.33■□□□□ 0.85
PTCD1-204ENST00000430982 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
PTCD1-204ENST00000430982 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTCD1-204ENST00000430982 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
PTCD1-204ENST00000430982 COL5A3P25940 1745 aaPredicted RBP20.32■□□□□ 0.84
PTCD1-204ENST00000430982 KLRG1Q96E93 195 aa20.31■□□□□ 0.84
PTCD1-204ENST00000430982 TMOD3Q9NYL9 352 aa20.31■□□□□ 0.84
PTCD1-204ENST00000430982 BCS1LQ9Y276 419 aa20.31■□□□□ 0.84
PTCD1-204ENST00000430982 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
PTCD1-204ENST00000430982 COL13A1Q5TAT6 717 aaPredicted RBP20.3■□□□□ 0.84
PTCD1-204ENST00000430982 DCAF5Q96JK2 942 aa20.3■□□□□ 0.84
PTCD1-204ENST00000430982 ATP6V1AP38606 617 aa20.29■□□□□ 0.84
PTCD1-204ENST00000430982 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
PTCD1-204ENST00000430982 NLGN1Q8N2Q7 840 aa20.29■□□□□ 0.84
PTCD1-204ENST00000430982 MYBBP1AQ9BQG0 1328 aaKnown RBP20.28■□□□□ 0.84
PTCD1-204ENST00000430982 PCNTO95613 3336 aa20.28■□□□□ 0.84
PTCD1-204ENST00000430982 PRKAR2BP31323 418 aa20.28■□□□□ 0.84
PTCD1-204ENST00000430982 FSTL1Q12841 308 aa20.28■□□□□ 0.84
PTCD1-204ENST00000430982 AKAP4Q5JQC9 854 aa20.28■□□□□ 0.84
PTCD1-204ENST00000430982 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
PTCD1-204ENST00000430982 DPEP1P16444 411 aa20.27■□□□□ 0.84
PTCD1-204ENST00000430982 KCNA3P22001 575 aa20.27■□□□□ 0.84
PTCD1-204ENST00000430982 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
PTCD1-204ENST00000430982 KDM6AO15550 1401 aaPredicted RBP20.27■□□□□ 0.83
PTCD1-204ENST00000430982 TNRC6CQ9HCJ0 1690 aaKnown RBP20.26■□□□□ 0.83
PTCD1-204ENST00000430982 ERVV-2B6SEH9 535 aa20.26■□□□□ 0.83
PTCD1-204ENST00000430982 ADRA2BP18089 450 aa20.26■□□□□ 0.83
PTCD1-204ENST00000430982 CABP4P57796 275 aa20.26■□□□□ 0.83
PTCD1-204ENST00000430982 ARHGAP27Q6ZUM4 889 aa20.26■□□□□ 0.83
PTCD1-204ENST00000430982 SLC4A9Q96Q91 983 aa20.26■□□□□ 0.83
PTCD1-204ENST00000430982 GYS1P13807 737 aa20.25■□□□□ 0.83
PTCD1-204ENST00000430982 HTRA3P83110 453 aa20.25■□□□□ 0.83
PTCD1-204ENST00000430982 TRAPPC3LQ5T215 181 aa20.25■□□□□ 0.83
PTCD1-204ENST00000430982 GAS2L2Q8NHY3 880 aa20.25■□□□□ 0.83
PTCD1-204ENST00000430982 PRKRIP1Q9H875 184 aaPredicted RBP20.25■□□□□ 0.83
PTCD1-204ENST00000430982 RTCBQ9Y3I0 505 aaKnown RBP20.25■□□□□ 0.83
PTCD1-204ENST00000430982 KCPQ6ZWJ8 1503 aa20.25■□□□□ 0.83
PTCD1-204ENST00000430982 CNTNAP4Q9C0A0 1308 aa20.25■□□□□ 0.83
PTCD1-204ENST00000430982 FCHSD2O94868 740 aa20.24■□□□□ 0.83
PTCD1-204ENST00000430982 RC3H1Q5TC82 1133 aaKnown RBP20.24■□□□□ 0.83
PTCD1-204ENST00000430982 C9orf131Q5VYM1 1079 aa20.24■□□□□ 0.83
PTCD1-204ENST00000430982 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
PTCD1-204ENST00000430982 ARHGEF1Q92888 912 aaKnown RBP20.23■□□□□ 0.83
PTCD1-204ENST00000430982 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms