RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 SCN11AQ9UI33 1791 aa22.25■■□□□ 1.15
PTPRA-206ENST00000430705 ZNF530Q6P9A1 599 aaPredicted RBP22.24■■□□□ 1.15
PTPRA-206ENST00000430705 COL3A1P02461 1466 aaPredicted RBP22.23■■□□□ 1.15
PTPRA-206ENST00000430705 CICQ96RK0 1608 aaPredicted RBP22.23■■□□□ 1.15
PTPRA-206ENST00000430705 TJP1Q07157 1748 aa22.23■■□□□ 1.15
PTPRA-206ENST00000430705 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.22■■□□□ 1.15
PTPRA-206ENST00000430705 ERVV-2B6SEH9 535 aa22.22■■□□□ 1.15
PTPRA-206ENST00000430705 PHF14O94880 888 aa22.22■■□□□ 1.15
PTPRA-206ENST00000430705 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
PTPRA-206ENST00000430705 SULT6B1Q6IMI4 303 aa22.22■■□□□ 1.15
PTPRA-206ENST00000430705 FLAD1Q8NFF5 587 aa22.22■■□□□ 1.15
PTPRA-206ENST00000430705 DCAF5Q96JK2 942 aa22.22■■□□□ 1.15
PTPRA-206ENST00000430705 ADAMTS7Q9UKP4 1686 aa22.2■■□□□ 1.15
PTPRA-206ENST00000430705 VIRMAQ69YN4 1812 aaKnown RBP22.2■■□□□ 1.14
PTPRA-206ENST00000430705 SSFA2P28290 1259 aa22.2■■□□□ 1.14
PTPRA-206ENST00000430705 ATP6V1AP38606 617 aa22.2■■□□□ 1.14
PTPRA-206ENST00000430705 AMOTQ4VCS5 1084 aa22.2■■□□□ 1.14
PTPRA-206ENST00000430705 C4AP0C0L4 1744 aa22.2■■□□□ 1.14
PTPRA-206ENST00000430705 MTHFSP49914 203 aa22.19■■□□□ 1.14
PTPRA-206ENST00000430705 MRC1P22897 1456 aa22.18■■□□□ 1.14
PTPRA-206ENST00000430705 GNPATO15228 680 aa22.18■■□□□ 1.14
PTPRA-206ENST00000430705 HSP90AB1P08238 724 aaKnown RBP22.18■■□□□ 1.14
PTPRA-206ENST00000430705 YBX3P16989 372 aaKnown RBP eCLIP22.18■■□□□ 1.14
PTPRA-206ENST00000430705 MYH14Q7Z406 1995 aaKnown RBP22.18■■□□□ 1.14
PTPRA-206ENST00000430705 GPR162Q16538 588 aa22.17■■□□□ 1.14
PTPRA-206ENST00000430705 CC2D1BQ5T0F9 858 aaKnown RBP22.17■■□□□ 1.14
PTPRA-206ENST00000430705 ZNF784Q8NCA9 323 aaPredicted RBP22.17■■□□□ 1.14
PTPRA-206ENST00000430705 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
PTPRA-206ENST00000430705 NPC1L1Q9UHC9 1359 aa22.16■■□□□ 1.14
PTPRA-206ENST00000430705 HMGB2P26583 209 aaKnown RBP22.16■■□□□ 1.14
PTPRA-206ENST00000430705 CABP4P57796 275 aa22.14■■□□□ 1.13
PTPRA-206ENST00000430705 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
PTPRA-206ENST00000430705 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
PTPRA-206ENST00000430705 HMOX1P09601 288 aa22.13■■□□□ 1.13
PTPRA-206ENST00000430705 C1orf141Q5JVX7 400 aa22.13■■□□□ 1.13
PTPRA-206ENST00000430705 RBM42Q9BTD8 480 aaKnown RBP22.13■■□□□ 1.13
PTPRA-206ENST00000430705 CD2APQ9Y5K6 639 aa22.13■■□□□ 1.13
PTPRA-206ENST00000430705 CNTNAP4Q9C0A0 1308 aa22.12■■□□□ 1.13
PTPRA-206ENST00000430705 NFATC2IPQ8NCF5 419 aa22.11■■□□□ 1.13
PTPRA-206ENST00000430705 KCPQ6ZWJ8 1503 aa22.11■■□□□ 1.13
PTPRA-206ENST00000430705 AKAP4Q5JQC9 854 aa22.09■■□□□ 1.13
PTPRA-206ENST00000430705 RC3H1Q5TC82 1133 aaKnown RBP22.09■■□□□ 1.13
PTPRA-206ENST00000430705 LGR6Q9HBX8 967 aa22.09■■□□□ 1.13
PTPRA-206ENST00000430705 UBR2Q8IWV8 1755 aa22.09■■□□□ 1.13
PTPRA-206ENST00000430705 DIAPH1O60610 1272 aaKnown RBP22.08■■□□□ 1.13
PTPRA-206ENST00000430705 PTCD1O75127 700 aaKnown RBP22.08■■□□□ 1.13
PTPRA-206ENST00000430705 MTHFSDQ2M296 383 aaKnown RBP22.07■■□□□ 1.12
PTPRA-206ENST00000430705 RTCBQ9Y3I0 505 aaKnown RBP22.07■■□□□ 1.12
PTPRA-206ENST00000430705 CNGB1Q14028 1251 aaPredicted RBP22.06■■□□□ 1.12
PTPRA-206ENST00000430705 ARHGEF1Q92888 912 aaKnown RBP22.06■■□□□ 1.12
PTPRA-206ENST00000430705 SLC52A2Q9HAB3 445 aa22.06■■□□□ 1.12
PTPRA-206ENST00000430705 PXDNLA1KZ92 1463 aa22.06■■□□□ 1.12
PTPRA-206ENST00000430705 C10orf71Q711Q0 1435 aa22.06■■□□□ 1.12
PTPRA-206ENST00000430705 SIPA1L3O60292 1781 aaPredicted RBP22.05■■□□□ 1.12
PTPRA-206ENST00000430705 RNMTO43148 476 aaKnown RBP22.05■■□□□ 1.12
PTPRA-206ENST00000430705 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
PTPRA-206ENST00000430705 MMP10P09238 476 aa22.05■■□□□ 1.12
PTPRA-206ENST00000430705 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
PTPRA-206ENST00000430705 GYS1P13807 737 aa22.04■■□□□ 1.12
PTPRA-206ENST00000430705 CRKLP46109 303 aaKnown RBP22.04■■□□□ 1.12
PTPRA-206ENST00000430705 TRAPPC3LQ5T215 181 aa22.04■■□□□ 1.12
PTPRA-206ENST00000430705 ADRA2BP18089 450 aa22.03■■□□□ 1.12
PTPRA-206ENST00000430705 GRIN3BO60391 1043 aa22.02■■□□□ 1.12
PTPRA-206ENST00000430705 WWC3Q9ULE0 1092 aa22.02■■□□□ 1.12
PTPRA-206ENST00000430705 BRCA1P38398 1863 aaKnown RBP22.02■■□□□ 1.12
PTPRA-206ENST00000430705 SLC39A6Q13433 755 aa22.01■■□□□ 1.11
PTPRA-206ENST00000430705 INTS5Q6P9B9 1019 aaKnown RBP22.01■■□□□ 1.11
PTPRA-206ENST00000430705 DNAJC10Q8IXB1 793 aa22■■□□□ 1.11
PTPRA-206ENST00000430705 ADCY9O60503 1353 aa21.99■■□□□ 1.11
PTPRA-206ENST00000430705 SRP68Q9UHB9 627 aaKnown RBP21.99■■□□□ 1.11
PTPRA-206ENST00000430705 NLGN1Q8N2Q7 840 aa21.98■■□□□ 1.11
PTPRA-206ENST00000430705 USP42Q9H9J4 1324 aaKnown RBP21.98■■□□□ 1.11
PTPRA-206ENST00000430705 RFC4P35249 363 aa21.97■■□□□ 1.11
PTPRA-206ENST00000430705 U2SURPO15042 1029 aaKnown RBP21.96■■□□□ 1.11
PTPRA-206ENST00000430705 SOS1Q07889 1333 aaPredicted RBP21.96■■□□□ 1.11
PTPRA-206ENST00000430705 ATP10DQ9P241 1426 aa21.96■■□□□ 1.11
PTPRA-206ENST00000430705 CYP19A1P11511 503 aaPredicted RBP21.95■■□□□ 1.1
PTPRA-206ENST00000430705 DDR1Q08345 913 aa21.95■■□□□ 1.1
PTPRA-206ENST00000430705 FKBP8Q14318 412 aa21.95■■□□□ 1.1
PTPRA-206ENST00000430705 RSPH6AQ9H0K4 717 aa21.94■■□□□ 1.1
PTPRA-206ENST00000430705 CCDC87Q9NVE4 849 aa21.94■■□□□ 1.1
PTPRA-206ENST00000430705 IL17REQ8NFR9 667 aa21.93■■□□□ 1.1
PTPRA-206ENST00000430705 PHACTR3Q96KR7 559 aa21.93■■□□□ 1.1
PTPRA-206ENST00000430705 NRXN2Q9P2S2 1712 aa21.92■■□□□ 1.1
PTPRA-206ENST00000430705 CEMIPQ8WUJ3 1361 aa21.92■■□□□ 1.1
PTPRA-206ENST00000430705 PPP2R1AP30153 589 aa21.92■■□□□ 1.1
PTPRA-206ENST00000430705 ZBTB1Q9Y2K1 713 aa21.92■■□□□ 1.1
PTPRA-206ENST00000430705 COL15A1P39059 1388 aa21.91■■□□□ 1.1
PTPRA-206ENST00000430705 AFDNP55196 1824 aaKnown RBP21.91■■□□□ 1.1
PTPRA-206ENST00000430705 SCN7AQ01118 1682 aa21.91■■□□□ 1.1
PTPRA-206ENST00000430705 A0A0G2JLW4 131 aa21.9■■□□□ 1.1
PTPRA-206ENST00000430705 C1QTNF8P60827 252 aa21.9■■□□□ 1.1
PTPRA-206ENST00000430705 TGFB2P61812 414 aa21.9■■□□□ 1.1
PTPRA-206ENST00000430705 GAS2L2Q8NHY3 880 aa21.9■■□□□ 1.1
PTPRA-206ENST00000430705 ARFGEF1Q9Y6D6 1849 aa21.9■■□□□ 1.1
PTPRA-206ENST00000430705 GNAT3A8MTJ3 354 aa21.89■■□□□ 1.09
PTPRA-206ENST00000430705 DPEP1P16444 411 aa21.89■■□□□ 1.09
PTPRA-206ENST00000430705 KCNA3P22001 575 aa21.89■■□□□ 1.09
PTPRA-206ENST00000430705 PRKAR2BP31323 418 aa21.89■■□□□ 1.09
PTPRA-206ENST00000430705 VSIG10Q8N0Z9 540 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms