RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 LINC00116Q8NCU8 138 aa23.89■■□□□ 1.41
RCC1-209ENST00000430407 TOGARAM1Q9Y4F4 1720 aa23.89■■□□□ 1.41
RCC1-209ENST00000430407 GNPATO15228 680 aa23.88■■□□□ 1.41
RCC1-209ENST00000430407 HSP90AB1P08238 724 aaKnown RBP23.88■■□□□ 1.41
RCC1-209ENST00000430407 IL13P35225 146 aa23.87■■□□□ 1.41
RCC1-209ENST00000430407 ITGB4P16144 1822 aa23.87■■□□□ 1.41
RCC1-209ENST00000430407 PLEKHO1Q53GL0 409 aaPredicted RBP23.86■■□□□ 1.41
RCC1-209ENST00000430407 SMIM5Q71RC9 77 aa23.86■■□□□ 1.41
RCC1-209ENST00000430407 AMIGO3Q86WK7 504 aa23.86■■□□□ 1.41
RCC1-209ENST00000430407 ATG3Q9NT62 314 aa23.86■■□□□ 1.41
RCC1-209ENST00000430407 TAF1LQ8IZX4 1826 aa23.86■■□□□ 1.41
RCC1-209ENST00000430407 CNGB1Q14028 1251 aaPredicted RBP23.85■■□□□ 1.41
RCC1-209ENST00000430407 UTRNP46939 3433 aa23.85■■□□□ 1.41
RCC1-209ENST00000430407 ERVV-2B6SEH9 535 aa23.84■■□□□ 1.41
RCC1-209ENST00000430407 ITPK1Q13572 414 aa23.84■■□□□ 1.41
RCC1-209ENST00000430407 DCAF5Q96JK2 942 aa23.84■■□□□ 1.41
RCC1-209ENST00000430407 RBM42Q9BTD8 480 aaKnown RBP23.84■■□□□ 1.41
RCC1-209ENST00000430407 AMOTQ4VCS5 1084 aa23.83■■□□□ 1.41
RCC1-209ENST00000430407 SULT6B1Q6IMI4 303 aa23.83■■□□□ 1.41
RCC1-209ENST00000430407 RTCBQ9Y3I0 505 aaKnown RBP23.82■■□□□ 1.4
RCC1-209ENST00000430407 DIAPH1O60610 1272 aaKnown RBP23.81■■□□□ 1.4
RCC1-209ENST00000430407 TRAPPC3LQ5T215 181 aa23.81■■□□□ 1.4
RCC1-209ENST00000430407 ZNF530Q6P9A1 599 aaPredicted RBP23.81■■□□□ 1.4
RCC1-209ENST00000430407 AEBP1Q8IUX7 1158 aa23.81■■□□□ 1.4
RCC1-209ENST00000430407 KDRP35968 1356 aa23.8■■□□□ 1.4
RCC1-209ENST00000430407 CABP4P57796 275 aa23.8■■□□□ 1.4
RCC1-209ENST00000430407 C1orf141Q5JVX7 400 aa23.8■■□□□ 1.4
RCC1-209ENST00000430407 GPBP1L1Q9HC44 474 aaPredicted RBP23.79■■□□□ 1.4
RCC1-209ENST00000430407 WWC3Q9ULE0 1092 aa23.79■■□□□ 1.4
RCC1-209ENST00000430407 NLGN1Q8N2Q7 840 aa23.78■■□□□ 1.4
RCC1-209ENST00000430407 ATP10DQ9P241 1426 aa23.77■■□□□ 1.4
RCC1-209ENST00000430407 UBR3Q6ZT12 1888 aa23.77■■□□□ 1.4
RCC1-209ENST00000430407 MMP10P09238 476 aa23.77■■□□□ 1.4
RCC1-209ENST00000430407 ADRA2BP18089 450 aa23.75■■□□□ 1.39
RCC1-209ENST00000430407 RFC4P35249 363 aa23.75■■□□□ 1.39
RCC1-209ENST00000430407 RC3H1Q5TC82 1133 aaKnown RBP23.75■■□□□ 1.39
RCC1-209ENST00000430407 CFAP53Q96M91 514 aa23.73■■□□□ 1.39
RCC1-209ENST00000430407 RPS6KA4O75676 772 aa23.72■■□□□ 1.39
RCC1-209ENST00000430407 HMOX1P09601 288 aa23.72■■□□□ 1.39
RCC1-209ENST00000430407 TGFB2P61812 414 aa23.72■■□□□ 1.39
RCC1-209ENST00000430407 ZNF526Q8TF50 670 aaPredicted RBP23.72■■□□□ 1.39
RCC1-209ENST00000430407 ARHGEF1Q92888 912 aaKnown RBP23.72■■□□□ 1.39
RCC1-209ENST00000430407 SLC4A9Q96Q91 983 aa23.72■■□□□ 1.39
RCC1-209ENST00000430407 CNTNAP4Q9C0A0 1308 aa23.72■■□□□ 1.39
RCC1-209ENST00000430407 PTCD1O75127 700 aaKnown RBP23.71■■□□□ 1.39
RCC1-209ENST00000430407 CCDC87Q9NVE4 849 aa23.71■■□□□ 1.39
RCC1-209ENST00000430407 COL3A1P02461 1466 aaPredicted RBP23.7■■□□□ 1.38
RCC1-209ENST00000430407 PPP2R1AP30153 589 aa23.7■■□□□ 1.38
RCC1-209ENST00000430407 NFATC2IPQ8NCF5 419 aa23.7■■□□□ 1.38
RCC1-209ENST00000430407 PARP3Q9Y6F1 533 aa23.7■■□□□ 1.38
RCC1-209ENST00000430407 KDM6AO15550 1401 aaPredicted RBP23.69■■□□□ 1.38
RCC1-209ENST00000430407 U2SURPO15042 1029 aaKnown RBP23.69■■□□□ 1.38
RCC1-209ENST00000430407 AKAP4Q5JQC9 854 aa23.68■■□□□ 1.38
RCC1-209ENST00000430407 ADCY9O60503 1353 aa23.67■■□□□ 1.38
RCC1-209ENST00000430407 GYS1P13807 737 aa23.67■■□□□ 1.38
RCC1-209ENST00000430407 ZEB1P37275 1124 aaPredicted RBP23.67■■□□□ 1.38
RCC1-209ENST00000430407 BCS1LQ9Y276 419 aa23.67■■□□□ 1.38
RCC1-209ENST00000430407 NUDCQ9Y266 331 aa23.66■■□□□ 1.38
RCC1-209ENST00000430407 A0A0G2JLW4 131 aa23.65■■□□□ 1.38
RCC1-209ENST00000430407 CRKLP46109 303 aaKnown RBP23.65■■□□□ 1.38
RCC1-209ENST00000430407 CICQ96RK0 1608 aaPredicted RBP23.64■■□□□ 1.38
RCC1-209ENST00000430407 ZNF831Q5JPB2 1677 aa23.64■■□□□ 1.37
RCC1-209ENST00000430407 PXDNLA1KZ92 1463 aa23.63■■□□□ 1.37
RCC1-209ENST00000430407 MTHFSDQ2M296 383 aaKnown RBP23.62■■□□□ 1.37
RCC1-209ENST00000430407 C10orf71Q711Q0 1435 aa23.61■■□□□ 1.37
RCC1-209ENST00000430407 FCHSD2O94868 740 aa23.61■■□□□ 1.37
RCC1-209ENST00000430407 ARHGAP27Q6ZUM4 889 aa23.61■■□□□ 1.37
RCC1-209ENST00000430407 DPEP1P16444 411 aa23.6■■□□□ 1.37
RCC1-209ENST00000430407 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
RCC1-209ENST00000430407 GAS2L2Q8NHY3 880 aa23.59■■□□□ 1.37
RCC1-209ENST00000430407 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
RCC1-209ENST00000430407 GOLGB1Q14789 3259 aaKnown RBP23.59■■□□□ 1.37
RCC1-209ENST00000430407 RNMTO43148 476 aaKnown RBP23.58■■□□□ 1.37
RCC1-209ENST00000430407 ZPR1O75312 459 aa23.58■■□□□ 1.37
RCC1-209ENST00000430407 SRP68Q9UHB9 627 aaKnown RBP23.58■■□□□ 1.37
RCC1-209ENST00000430407 USP42Q9H9J4 1324 aaKnown RBP23.58■■□□□ 1.36
RCC1-209ENST00000430407 COL5A3P25940 1745 aaPredicted RBP23.57■■□□□ 1.36
RCC1-209ENST00000430407 HSPA6P17066 643 aa23.57■■□□□ 1.36
RCC1-209ENST00000430407 LGR6Q9HBX8 967 aa23.57■■□□□ 1.36
RCC1-209ENST00000430407 PIM2Q9P1W9 311 aa23.57■■□□□ 1.36
RCC1-209ENST00000430407 U2AF1L5P0DN76 240 aaPredicted RBP23.56■■□□□ 1.36
RCC1-209ENST00000430407 U2AF1Q01081 240 aaKnown RBP eCLIP23.56■■□□□ 1.36
RCC1-209ENST00000430407 RSPH6AQ9H0K4 717 aa23.56■■□□□ 1.36
RCC1-209ENST00000430407 C4AP0C0L4 1744 aa23.56■■□□□ 1.36
RCC1-209ENST00000430407 PRKAR2BP31323 418 aa23.55■■□□□ 1.36
RCC1-209ENST00000430407 FKBP8Q14318 412 aa23.55■■□□□ 1.36
RCC1-209ENST00000430407 RALBP1Q15311 655 aa23.55■■□□□ 1.36
RCC1-209ENST00000430407 DNAJC10Q8IXB1 793 aa23.55■■□□□ 1.36
RCC1-209ENST00000430407 INTS5Q6P9B9 1019 aaKnown RBP23.54■■□□□ 1.36
RCC1-209ENST00000430407 KIF13BQ9NQT8 1826 aa23.52■■□□□ 1.36
RCC1-209ENST00000430407 GNAT3A8MTJ3 354 aa23.52■■□□□ 1.36
RCC1-209ENST00000430407 KIF3CO14782 793 aa23.52■■□□□ 1.36
RCC1-209ENST00000430407 SLC39A6Q13433 755 aa23.52■■□□□ 1.36
RCC1-209ENST00000430407 DALRD3Q5D0E6 543 aaKnown RBP23.52■■□□□ 1.36
RCC1-209ENST00000430407 SCN11AQ9UI33 1791 aa23.52■■□□□ 1.36
RCC1-209ENST00000430407 N4BP2Q86UW6 1770 aaPredicted RBP23.51■■□□□ 1.35
RCC1-209ENST00000430407 USPL1Q5W0Q7 1092 aa23.51■■□□□ 1.35
RCC1-209ENST00000430407 MRC1P22897 1456 aa23.5■■□□□ 1.35
RCC1-209ENST00000430407 KCNA3P22001 575 aa23.5■■□□□ 1.35
RCC1-209ENST00000430407 DDR1Q08345 913 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms