RNA–Protein interactions for RNA: ENST00000430397.5

CLCN2-203, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 1 (best)

Gene CLCN2, Length 1,844 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-203ENST00000430397 CHL1O00533 1208 aa22.59■■□□□ 1.21
CLCN2-203ENST00000430397 CABP4P57796 275 aa22.59■■□□□ 1.21
CLCN2-203ENST00000430397 KRT27Q7Z3Y8 459 aa22.59■■□□□ 1.21
CLCN2-203ENST00000430397 FAM182BQ5T319 152 aa22.59■■□□□ 1.21
CLCN2-203ENST00000430397 NFATC2IPQ8NCF5 419 aa22.59■■□□□ 1.21
CLCN2-203ENST00000430397 SLC52A2Q9HAB3 445 aa22.59■■□□□ 1.21
CLCN2-203ENST00000430397 BTBD11A6QL63 1104 aa22.58■■□□□ 1.21
CLCN2-203ENST00000430397 ELL2O00472 640 aaPredicted RBP22.58■■□□□ 1.21
CLCN2-203ENST00000430397 MARCH10Q8NA82 808 aaPredicted RBP22.58■■□□□ 1.21
CLCN2-203ENST00000430397 NKX1-1Q15270 411 aaPredicted RBP22.57■■□□□ 1.2
CLCN2-203ENST00000430397 KRT24Q2M2I5 525 aa22.56■■□□□ 1.2
CLCN2-203ENST00000430397 SYTL4Q96C24 671 aaPredicted RBP22.55■■□□□ 1.2
CLCN2-203ENST00000430397 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
CLCN2-203ENST00000430397 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
CLCN2-203ENST00000430397 KCNQ3O43525 872 aa22.54■■□□□ 1.2
CLCN2-203ENST00000430397 ADAMTS7Q9UKP4 1686 aa22.54■■□□□ 1.2
CLCN2-203ENST00000430397 SLC39A6Q13433 755 aa22.54■■□□□ 1.2
CLCN2-203ENST00000430397 ACSBG1Q96GR2 724 aa22.54■■□□□ 1.2
CLCN2-203ENST00000430397 SUPT16HQ9Y5B9 1047 aaKnown RBP22.54■■□□□ 1.2
CLCN2-203ENST00000430397 VIRMAQ69YN4 1812 aaKnown RBP22.53■■□□□ 1.2
CLCN2-203ENST00000430397 SOCS7O14512 581 aa22.53■■□□□ 1.2
CLCN2-203ENST00000430397 TSPYL6Q8N831 410 aa22.53■■□□□ 1.2
CLCN2-203ENST00000430397 C8orf58Q8NAV2 365 aa22.53■■□□□ 1.2
CLCN2-203ENST00000430397 ERVV-2B6SEH9 535 aa22.52■■□□□ 1.2
CLCN2-203ENST00000430397 TMOD3Q9NYL9 352 aa22.52■■□□□ 1.2
CLCN2-203ENST00000430397 EP400Q96L91 3159 aa22.51■■□□□ 1.19
CLCN2-203ENST00000430397 TOGARAM1Q9Y4F4 1720 aa22.5■■□□□ 1.19
CLCN2-203ENST00000430397 TWISTNBQ3B726 338 aaPredicted RBP22.5■■□□□ 1.19
CLCN2-203ENST00000430397 BABAM1Q9NWV8 329 aa22.5■■□□□ 1.19
CLCN2-203ENST00000430397 MRC1P22897 1456 aa22.5■■□□□ 1.19
CLCN2-203ENST00000430397 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
CLCN2-203ENST00000430397 BCL2L13Q9BXK5 485 aa22.5■■□□□ 1.19
CLCN2-203ENST00000430397 PRIM1P49642 420 aaKnown RBP22.49■■□□□ 1.19
CLCN2-203ENST00000430397 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
CLCN2-203ENST00000430397 TCERG1O14776 1098 aaKnown RBP22.47■■□□□ 1.19
CLCN2-203ENST00000430397 ZNF790Q6PG37 636 aa22.47■■□□□ 1.19
CLCN2-203ENST00000430397 EIF4A1P60842 406 aaKnown RBP22.47■■□□□ 1.19
CLCN2-203ENST00000430397 PIGBQ92521 554 aa22.47■■□□□ 1.19
CLCN2-203ENST00000430397 SIPA1L3O60292 1781 aaPredicted RBP22.47■■□□□ 1.19
CLCN2-203ENST00000430397 UPF1Q92900 1129 aaKnown RBP eCLIP22.46■■□□□ 1.19
CLCN2-203ENST00000430397 DOT1LQ8TEK3 1739 aa22.46■■□□□ 1.19
CLCN2-203ENST00000430397 VAMP4O75379 141 aa22.45■■□□□ 1.19
CLCN2-203ENST00000430397 BCAR3O75815 825 aa22.45■■□□□ 1.19
CLCN2-203ENST00000430397 NECTIN2Q92692 538 aa22.45■■□□□ 1.19
CLCN2-203ENST00000430397 KDM3BQ7LBC6 1761 aa22.45■■□□□ 1.18
CLCN2-203ENST00000430397 RARSP54136 660 aaKnown RBP22.44■■□□□ 1.18
CLCN2-203ENST00000430397 KCNQ2O43526 872 aa22.43■■□□□ 1.18
CLCN2-203ENST00000430397 CT47B1P0C2W7 299 aaPredicted RBP22.43■■□□□ 1.18
CLCN2-203ENST00000430397 SMC4Q9NTJ3 1288 aa22.43■■□□□ 1.18
CLCN2-203ENST00000430397 PTCD1O75127 700 aaKnown RBP22.43■■□□□ 1.18
CLCN2-203ENST00000430397 FAM196AQ6ZSG2 479 aa22.43■■□□□ 1.18
CLCN2-203ENST00000430397 ASAP1Q9ULH1 1129 aa22.43■■□□□ 1.18
CLCN2-203ENST00000430397 ZNF496Q96IT1 587 aaPredicted RBP22.42■■□□□ 1.18
CLCN2-203ENST00000430397 BCL9O00512 1426 aa22.42■■□□□ 1.18
CLCN2-203ENST00000430397 PRAMEF22A3QJZ6 481 aa22.41■■□□□ 1.18
CLCN2-203ENST00000430397 PLIN1O60240 522 aa22.41■■□□□ 1.18
CLCN2-203ENST00000430397 EIF2S2P20042 333 aaKnown RBP22.41■■□□□ 1.18
CLCN2-203ENST00000430397 IRX6P78412 446 aaPredicted RBP22.41■■□□□ 1.18
CLCN2-203ENST00000430397 SSH1Q8WYL5 1049 aa22.41■■□□□ 1.18
CLCN2-203ENST00000430397 KAT6BQ8WYB5 2073 aa22.4■■□□□ 1.18
CLCN2-203ENST00000430397 FRAT1Q92837 279 aaPredicted RBP22.4■■□□□ 1.18
CLCN2-203ENST00000430397 FMNL2Q96PY5 1086 aa22.4■■□□□ 1.18
CLCN2-203ENST00000430397 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
CLCN2-203ENST00000430397 TRIM37O94972 964 aa22.39■■□□□ 1.17
CLCN2-203ENST00000430397 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
CLCN2-203ENST00000430397 RBM42Q9BTD8 480 aaKnown RBP22.39■■□□□ 1.17
CLCN2-203ENST00000430397 ITGB4P16144 1822 aa22.39■■□□□ 1.17
CLCN2-203ENST00000430397 RRP1P56182 461 aaKnown RBP22.38■■□□□ 1.17
CLCN2-203ENST00000430397 PTF1AQ7RTS3 328 aa22.38■■□□□ 1.17
CLCN2-203ENST00000430397 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
CLCN2-203ENST00000430397 HDGFL1Q5TGJ6 251 aa22.38■■□□□ 1.17
CLCN2-203ENST00000430397 ALDH1L2Q3SY69 923 aa22.36■■□□□ 1.17
CLCN2-203ENST00000430397 NEFLP07196 543 aa22.35■■□□□ 1.17
CLCN2-203ENST00000430397 ZNF428Q96B54 188 aa22.35■■□□□ 1.17
CLCN2-203ENST00000430397 PAPPAQ13219 1627 aa22.34■■□□□ 1.17
CLCN2-203ENST00000430397 SNRPA1P09661 255 aaKnown RBP22.34■■□□□ 1.17
CLCN2-203ENST00000430397 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
CLCN2-203ENST00000430397 STK31Q9BXU1 1019 aa22.34■■□□□ 1.17
CLCN2-203ENST00000430397 KCPQ6ZWJ8 1503 aa22.34■■□□□ 1.17
CLCN2-203ENST00000430397 HEG1Q9ULI3 1381 aa22.34■■□□□ 1.17
CLCN2-203ENST00000430397 SF3B2Q13435 895 aaKnown RBP22.34■■□□□ 1.17
CLCN2-203ENST00000430397 HOXB7P09629 217 aa22.33■■□□□ 1.16
CLCN2-203ENST00000430397 MRPL50Q8N5N7 158 aaKnown RBP22.33■■□□□ 1.16
CLCN2-203ENST00000430397 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.33■■□□□ 1.16
CLCN2-203ENST00000430397 SLC4A2P04920 1241 aa22.32■■□□□ 1.16
CLCN2-203ENST00000430397 USP16Q9Y5T5 823 aa22.32■■□□□ 1.16
CLCN2-203ENST00000430397 TNS1Q9HBL0 1735 aaKnown RBP22.32■■□□□ 1.16
CLCN2-203ENST00000430397 DEFB132Q7Z7B7 95 aa22.31■■□□□ 1.16
CLCN2-203ENST00000430397 NOB1Q9ULX3 412 aaKnown RBP22.31■■□□□ 1.16
CLCN2-203ENST00000430397 SOS1Q07889 1333 aaPredicted RBP22.31■■□□□ 1.16
CLCN2-203ENST00000430397 SBF2Q86WG5 1849 aa22.31■■□□□ 1.16
CLCN2-203ENST00000430397 ANXA1P04083 346 aa22.31■■□□□ 1.16
CLCN2-203ENST00000430397 CHPF2Q9P2E5 772 aa22.31■■□□□ 1.16
CLCN2-203ENST00000430397 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
CLCN2-203ENST00000430397 PALLDQ8WX93 1383 aa22.3■■□□□ 1.16
CLCN2-203ENST00000430397 CCDC125Q86Z20 511 aa22.3■■□□□ 1.16
CLCN2-203ENST00000430397 C5P01031 1676 aa22.3■■□□□ 1.16
CLCN2-203ENST00000430397 PIP4K2AP48426 406 aaPredicted RBP22.29■■□□□ 1.16
CLCN2-203ENST00000430397 TNNQ9UQP3 1299 aa22.29■■□□□ 1.16
CLCN2-203ENST00000430397 NHSQ6T4R5 1651 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms