RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 YY1P25490 414 aa16.15■□□□□ 0.18
HDAC4-202ENST00000430200 IL13P35225 146 aa16.15■□□□□ 0.18
HDAC4-202ENST00000430200 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
HDAC4-202ENST00000430200 SLC16A10Q8TF71 515 aa16.15■□□□□ 0.18
HDAC4-202ENST00000430200 ATG3Q9NT62 314 aa16.15■□□□□ 0.18
HDAC4-202ENST00000430200 KNSTRNQ9Y448 316 aa16.15■□□□□ 0.18
HDAC4-202ENST00000430200 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
HDAC4-202ENST00000430200 SIK1P57059 783 aa16.14■□□□□ 0.17
HDAC4-202ENST00000430200 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
HDAC4-202ENST00000430200 ZNF530Q6P9A1 599 aaPredicted RBP16.13■□□□□ 0.17
HDAC4-202ENST00000430200 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
HDAC4-202ENST00000430200 PHF14O94880 888 aa16.12■□□□□ 0.17
HDAC4-202ENST00000430200 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
HDAC4-202ENST00000430200 MSH5O43196 834 aa16.11■□□□□ 0.17
HDAC4-202ENST00000430200 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
HDAC4-202ENST00000430200 SULT6B1Q6IMI4 303 aa16.11■□□□□ 0.17
HDAC4-202ENST00000430200 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
HDAC4-202ENST00000430200 MTHFSP49914 203 aa16.1■□□□□ 0.17
HDAC4-202ENST00000430200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
HDAC4-202ENST00000430200 POLD1P28340 1107 aa16.09■□□□□ 0.17
HDAC4-202ENST00000430200 AK7Q96M32 723 aa16.09■□□□□ 0.17
HDAC4-202ENST00000430200 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
HDAC4-202ENST00000430200 DCAF5Q96JK2 942 aa16.08■□□□□ 0.16
HDAC4-202ENST00000430200 AFDNP55196 1824 aaKnown RBP16.08■□□□□ 0.16
HDAC4-202ENST00000430200 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
HDAC4-202ENST00000430200 GNPATO15228 680 aa16.07■□□□□ 0.16
HDAC4-202ENST00000430200 HMOX1P09601 288 aa16.07■□□□□ 0.16
HDAC4-202ENST00000430200 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
HDAC4-202ENST00000430200 CNGB1Q14028 1251 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-202ENST00000430200 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-202ENST00000430200 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
HDAC4-202ENST00000430200 ATP6V1AP38606 617 aa16.06■□□□□ 0.16
HDAC4-202ENST00000430200 SSFA2P28290 1259 aa16.05■□□□□ 0.16
HDAC4-202ENST00000430200 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
HDAC4-202ENST00000430200 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
HDAC4-202ENST00000430200 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
HDAC4-202ENST00000430200 LGR6Q9HBX8 967 aa16.03■□□□□ 0.16
HDAC4-202ENST00000430200 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
HDAC4-202ENST00000430200 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
HDAC4-202ENST00000430200 DLEC1Q9Y238 1755 aa16.03■□□□□ 0.16
HDAC4-202ENST00000430200 C10orf71Q711Q0 1435 aa16.02■□□□□ 0.16
HDAC4-202ENST00000430200 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
HDAC4-202ENST00000430200 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
HDAC4-202ENST00000430200 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
HDAC4-202ENST00000430200 CABP4P57796 275 aa16.02■□□□□ 0.16
HDAC4-202ENST00000430200 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.16
HDAC4-202ENST00000430200 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
HDAC4-202ENST00000430200 ZNF784Q8NCA9 323 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-202ENST00000430200 NFATC2IPQ8NCF5 419 aa16.02■□□□□ 0.16
HDAC4-202ENST00000430200 FLAD1Q8NFF5 587 aa16.02■□□□□ 0.16
HDAC4-202ENST00000430200 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
HDAC4-202ENST00000430200 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
HDAC4-202ENST00000430200 PTCD1O75127 700 aaKnown RBP16.01■□□□□ 0.15
HDAC4-202ENST00000430200 MTHFSDQ2M296 383 aaKnown RBP16.01■□□□□ 0.15
HDAC4-202ENST00000430200 DIAPH1O60610 1272 aaKnown RBP16■□□□□ 0.15
HDAC4-202ENST00000430200 GPR162Q16538 588 aa16■□□□□ 0.15
HDAC4-202ENST00000430200 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
HDAC4-202ENST00000430200 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
HDAC4-202ENST00000430200 ANKRD31Q8N7Z5 1873 aa15.99■□□□□ 0.15
HDAC4-202ENST00000430200 RNMTO43148 476 aaKnown RBP15.98■□□□□ 0.15
HDAC4-202ENST00000430200 COL11A2P13942 1736 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-202ENST00000430200 SLC39A6Q13433 755 aa15.98■□□□□ 0.15
HDAC4-202ENST00000430200 SLC52A2Q9HAB3 445 aa15.98■□□□□ 0.15
HDAC4-202ENST00000430200 MMP10P09238 476 aa15.97■□□□□ 0.15
HDAC4-202ENST00000430200 CRKLP46109 303 aaKnown RBP15.97■□□□□ 0.15
HDAC4-202ENST00000430200 ARHGEF1Q92888 912 aaKnown RBP15.97■□□□□ 0.15
HDAC4-202ENST00000430200 CD2APQ9Y5K6 639 aa15.97■□□□□ 0.15
HDAC4-202ENST00000430200 LAMB4A4D0S4 1761 aa15.97■□□□□ 0.15
HDAC4-202ENST00000430200 KDM3BQ7LBC6 1761 aa15.97■□□□□ 0.15
HDAC4-202ENST00000430200 CEP350Q5VT06 3117 aa15.96■□□□□ 0.15
HDAC4-202ENST00000430200 GYS1P13807 737 aa15.96■□□□□ 0.15
HDAC4-202ENST00000430200 RC3H1Q5TC82 1133 aaKnown RBP15.96■□□□□ 0.15
HDAC4-202ENST00000430200 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
HDAC4-202ENST00000430200 SRP68Q9UHB9 627 aaKnown RBP15.96■□□□□ 0.15
HDAC4-202ENST00000430200 ADCY9O60503 1353 aa15.96■□□□□ 0.15
HDAC4-202ENST00000430200 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
HDAC4-202ENST00000430200 RPS6KA4O75676 772 aa15.95■□□□□ 0.14
HDAC4-202ENST00000430200 INTS5Q6P9B9 1019 aaKnown RBP15.95■□□□□ 0.14
HDAC4-202ENST00000430200 RTCBQ9Y3I0 505 aaKnown RBP15.95■□□□□ 0.14
HDAC4-202ENST00000430200 U2SURPO15042 1029 aaKnown RBP15.94■□□□□ 0.14
HDAC4-202ENST00000430200 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
HDAC4-202ENST00000430200 SBF1O95248 1867 aa15.93■□□□□ 0.14
HDAC4-202ENST00000430200 DDR1Q08345 913 aa15.93■□□□□ 0.14
HDAC4-202ENST00000430200 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
HDAC4-202ENST00000430200 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
HDAC4-202ENST00000430200 SOS1Q07889 1333 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-202ENST00000430200 CEMIPQ8WUJ3 1361 aa15.92■□□□□ 0.14
HDAC4-202ENST00000430200 ADRA2BP18089 450 aa15.92■□□□□ 0.14
HDAC4-202ENST00000430200 PPP2R1AP30153 589 aa15.92■□□□□ 0.14
HDAC4-202ENST00000430200 TRAPPC3LQ5T215 181 aa15.92■□□□□ 0.14
HDAC4-202ENST00000430200 ATP10DQ9P241 1426 aa15.92■□□□□ 0.14
HDAC4-202ENST00000430200 CYP19A1P11511 503 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-202ENST00000430200 FKBP8Q14318 412 aa15.91■□□□□ 0.14
HDAC4-202ENST00000430200 IL17REQ8NFR9 667 aa15.91■□□□□ 0.14
HDAC4-202ENST00000430200 ZBTB1Q9Y2K1 713 aa15.91■□□□□ 0.14
HDAC4-202ENST00000430200 COL15A1P39059 1388 aa15.9■□□□□ 0.14
HDAC4-202ENST00000430200 PRKAR2BP31323 418 aa15.9■□□□□ 0.14
HDAC4-202ENST00000430200 CCDC88AQ3V6T2 1871 aa15.89■□□□□ 0.13
HDAC4-202ENST00000430200 HMGB2P26583 209 aaKnown RBP15.89■□□□□ 0.13
HDAC4-202ENST00000430200 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms