RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 CABP4P57796 275 aa24.35■■□□□ 1.49
SSR4P1-202ENST00000429427 COL23A1Q86Y22 540 aaPredicted RBP24.35■■□□□ 1.49
SSR4P1-202ENST00000429427 COL24A1Q17RW2 1714 aa24.35■■□□□ 1.49
SSR4P1-202ENST00000429427 DDX10Q13206 875 aaKnown RBP24.34■■□□□ 1.49
SSR4P1-202ENST00000429427 SMIM5Q71RC9 77 aa24.34■■□□□ 1.49
SSR4P1-202ENST00000429427 NFATC2IPQ8NCF5 419 aa24.34■■□□□ 1.49
SSR4P1-202ENST00000429427 CFAP53Q96M91 514 aa24.34■■□□□ 1.49
SSR4P1-202ENST00000429427 RSPH6AQ9H0K4 717 aa24.34■■□□□ 1.49
SSR4P1-202ENST00000429427 ZNF831Q5JPB2 1677 aa24.32■■□□□ 1.48
SSR4P1-202ENST00000429427 PHACTR3Q96KR7 559 aa24.32■■□□□ 1.48
SSR4P1-202ENST00000429427 PPP1R1BQ9UD71 204 aaPredicted RBP24.32■■□□□ 1.48
SSR4P1-202ENST00000429427 UBR3Q6ZT12 1888 aa24.32■■□□□ 1.48
SSR4P1-202ENST00000429427 RNMTO43148 476 aaKnown RBP24.31■■□□□ 1.48
SSR4P1-202ENST00000429427 PRKAR2BP31323 418 aa24.3■■□□□ 1.48
SSR4P1-202ENST00000429427 ATP6V1AP38606 617 aa24.3■■□□□ 1.48
SSR4P1-202ENST00000429427 SLC16A10Q8TF71 515 aa24.3■■□□□ 1.48
SSR4P1-202ENST00000429427 SLC52A2Q9HAB3 445 aa24.3■■□□□ 1.48
SSR4P1-202ENST00000429427 VIRMAQ69YN4 1812 aaKnown RBP24.3■■□□□ 1.48
SSR4P1-202ENST00000429427 COL5A3P25940 1745 aaPredicted RBP24.29■■□□□ 1.48
SSR4P1-202ENST00000429427 U2AF1L5P0DN76 240 aaPredicted RBP24.27■■□□□ 1.48
SSR4P1-202ENST00000429427 U2AF1Q01081 240 aaKnown RBP eCLIP24.27■■□□□ 1.48
SSR4P1-202ENST00000429427 AK7Q96M32 723 aa24.27■■□□□ 1.48
SSR4P1-202ENST00000429427 RBM42Q9BTD8 480 aaKnown RBP24.27■■□□□ 1.48
SSR4P1-202ENST00000429427 MAP3K5Q99683 1374 aa24.27■■□□□ 1.48
SSR4P1-202ENST00000429427 CICQ96RK0 1608 aaPredicted RBP24.25■■□□□ 1.47
SSR4P1-202ENST00000429427 TJP1Q07157 1748 aa24.25■■□□□ 1.47
SSR4P1-202ENST00000429427 PTCD1O75127 700 aaKnown RBP24.25■■□□□ 1.47
SSR4P1-202ENST00000429427 IL17REQ8NFR9 667 aa24.25■■□□□ 1.47
SSR4P1-202ENST00000429427 FHDC1Q9C0D6 1143 aaPredicted RBP24.25■■□□□ 1.47
SSR4P1-202ENST00000429427 NUDCQ9Y266 331 aa24.25■■□□□ 1.47
SSR4P1-202ENST00000429427 KCPQ6ZWJ8 1503 aa24.25■■□□□ 1.47
SSR4P1-202ENST00000429427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.24■■□□□ 1.47
SSR4P1-202ENST00000429427 PHF14O94880 888 aa24.24■■□□□ 1.47
SSR4P1-202ENST00000429427 GAS2L2Q8NHY3 880 aa24.24■■□□□ 1.47
SSR4P1-202ENST00000429427 ARXQ96QS3 562 aa24.24■■□□□ 1.47
SSR4P1-202ENST00000429427 MSH5O43196 834 aa24.23■■□□□ 1.47
SSR4P1-202ENST00000429427 SLC39A6Q13433 755 aa24.23■■□□□ 1.47
SSR4P1-202ENST00000429427 MSL1Q68DK7 614 aa24.23■■□□□ 1.47
SSR4P1-202ENST00000429427 GNPATO15228 680 aa24.22■■□□□ 1.47
SSR4P1-202ENST00000429427 MYH14Q7Z406 1995 aaKnown RBP24.22■■□□□ 1.47
SSR4P1-202ENST00000429427 CEMIPQ8WUJ3 1361 aa24.21■■□□□ 1.47
SSR4P1-202ENST00000429427 GNAT3A8MTJ3 354 aa24.21■■□□□ 1.47
SSR4P1-202ENST00000429427 FCHSD2O94868 740 aa24.21■■□□□ 1.47
SSR4P1-202ENST00000429427 HMGB2P26583 209 aaKnown RBP24.21■■□□□ 1.47
SSR4P1-202ENST00000429427 SSFA2P28290 1259 aa24.21■■□□□ 1.47
SSR4P1-202ENST00000429427 FLAD1Q8NFF5 587 aa24.21■■□□□ 1.47
SSR4P1-202ENST00000429427 SYT17Q9BSW7 474 aa24.21■■□□□ 1.47
SSR4P1-202ENST00000429427 SIPA1L3O60292 1781 aaPredicted RBP24.21■■□□□ 1.47
SSR4P1-202ENST00000429427 CNTNAP4Q9C0A0 1308 aa24.2■■□□□ 1.46
SSR4P1-202ENST00000429427 RALBP1Q15311 655 aa24.2■■□□□ 1.46
SSR4P1-202ENST00000429427 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
SSR4P1-202ENST00000429427 UTRNP46939 3433 aa24.19■■□□□ 1.46
SSR4P1-202ENST00000429427 UBR2Q8IWV8 1755 aa24.19■■□□□ 1.46
SSR4P1-202ENST00000429427 RC3H1Q5TC82 1133 aaKnown RBP24.18■■□□□ 1.46
SSR4P1-202ENST00000429427 POLD1P28340 1107 aa24.17■■□□□ 1.46
SSR4P1-202ENST00000429427 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
SSR4P1-202ENST00000429427 CRKLP46109 303 aaKnown RBP24.15■■□□□ 1.46
SSR4P1-202ENST00000429427 DNAJC10Q8IXB1 793 aa24.15■■□□□ 1.46
SSR4P1-202ENST00000429427 GOLGB1Q14789 3259 aaKnown RBP24.14■■□□□ 1.45
SSR4P1-202ENST00000429427 MYBBP1AQ9BQG0 1328 aaKnown RBP24.13■■□□□ 1.45
SSR4P1-202ENST00000429427 RPS6KA4O75676 772 aa24.13■■□□□ 1.45
SSR4P1-202ENST00000429427 INTS5Q6P9B9 1019 aaKnown RBP24.13■■□□□ 1.45
SSR4P1-202ENST00000429427 RTCBQ9Y3I0 505 aaKnown RBP24.13■■□□□ 1.45
SSR4P1-202ENST00000429427 C4AP0C0L4 1744 aa24.13■■□□□ 1.45
SSR4P1-202ENST00000429427 MCM10Q7L590 875 aa24.12■■□□□ 1.45
SSR4P1-202ENST00000429427 ARHGEF1Q92888 912 aaKnown RBP24.12■■□□□ 1.45
SSR4P1-202ENST00000429427 TEFQ10587 303 aa24.11■■□□□ 1.45
SSR4P1-202ENST00000429427 DCTN1Q14203 1278 aa24.11■■□□□ 1.45
SSR4P1-202ENST00000429427 NLGN2Q8NFZ4 835 aa24.11■■□□□ 1.45
SSR4P1-202ENST00000429427 KCNQ3O43525 872 aa24.1■■□□□ 1.45
SSR4P1-202ENST00000429427 CYP19A1P11511 503 aaPredicted RBP24.1■■□□□ 1.45
SSR4P1-202ENST00000429427 ZNF790Q6PG37 636 aa24.1■■□□□ 1.45
SSR4P1-202ENST00000429427 ZNF496Q96IT1 587 aaPredicted RBP24.1■■□□□ 1.45
SSR4P1-202ENST00000429427 ADRA2BP18089 450 aa24.09■■□□□ 1.45
SSR4P1-202ENST00000429427 TRAPPC3LQ5T215 181 aa24.09■■□□□ 1.45
SSR4P1-202ENST00000429427 PRKRIP1Q9H875 184 aaPredicted RBP24.09■■□□□ 1.45
SSR4P1-202ENST00000429427 VSIG10Q8N0Z9 540 aa24.08■■□□□ 1.45
SSR4P1-202ENST00000429427 KLHL34Q8N239 644 aa24.08■■□□□ 1.45
SSR4P1-202ENST00000429427 CCDC87Q9NVE4 849 aa24.07■■□□□ 1.44
SSR4P1-202ENST00000429427 DLG5Q8TDM6 1919 aa24.06■■□□□ 1.44
SSR4P1-202ENST00000429427 GYS1P13807 737 aa24.06■■□□□ 1.44
SSR4P1-202ENST00000429427 SOS1Q07889 1333 aaPredicted RBP24.06■■□□□ 1.44
SSR4P1-202ENST00000429427 HEG1Q9ULI3 1381 aa24.05■■□□□ 1.44
SSR4P1-202ENST00000429427 HTATSF1O43719 755 aaKnown RBP24.05■■□□□ 1.44
SSR4P1-202ENST00000429427 TTC5Q8N0Z6 440 aa24.05■■□□□ 1.44
SSR4P1-202ENST00000429427 SRP68Q9UHB9 627 aaKnown RBP24.05■■□□□ 1.44
SSR4P1-202ENST00000429427 ZBTB1Q9Y2K1 713 aa24.05■■□□□ 1.44
SSR4P1-202ENST00000429427 BTBD11A6QL63 1104 aa24.04■■□□□ 1.44
SSR4P1-202ENST00000429427 MMP10P09238 476 aa24.03■■□□□ 1.44
SSR4P1-202ENST00000429427 NFE2L2Q16236 605 aa24.03■■□□□ 1.44
SSR4P1-202ENST00000429427 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
SSR4P1-202ENST00000429427 USP42Q9H9J4 1324 aaKnown RBP24.03■■□□□ 1.44
SSR4P1-202ENST00000429427 RFC4P35249 363 aa24.02■■□□□ 1.44
SSR4P1-202ENST00000429427 THUMPD2Q9BTF0 503 aaKnown RBP24.01■■□□□ 1.43
SSR4P1-202ENST00000429427 CD2APQ9Y5K6 639 aa24■■□□□ 1.43
SSR4P1-202ENST00000429427 PRAMEF22A3QJZ6 481 aa23.99■■□□□ 1.43
SSR4P1-202ENST00000429427 FKBP8Q14318 412 aa23.99■■□□□ 1.43
SSR4P1-202ENST00000429427 NLGN1Q8N2Q7 840 aa23.99■■□□□ 1.43
SSR4P1-202ENST00000429427 FMNL2Q96PY5 1086 aa23.99■■□□□ 1.43
SSR4P1-202ENST00000429427 COL15A1P39059 1388 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms