RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 WDHD1O75717 1129 aaPredicted RBP14.95□□□□□ -0.02
LDB3-205ENST00000429277 MCM4P33991 863 aa14.95□□□□□ -0.02
LDB3-205ENST00000429277 TAF7Q15545 349 aaPredicted RBP14.95□□□□□ -0.02
LDB3-205ENST00000429277 ARHGAP29Q52LW3 1261 aa14.95□□□□□ -0.02
LDB3-205ENST00000429277 RRS1Q15050 365 aaKnown RBP14.94□□□□□ -0.02
LDB3-205ENST00000429277 AKNAQ7Z591 1439 aa14.94□□□□□ -0.02
LDB3-205ENST00000429277 SLC26A8Q96RN1 970 aa14.94□□□□□ -0.02
LDB3-205ENST00000429277 TMOD3Q9NYL9 352 aa14.94□□□□□ -0.02
LDB3-205ENST00000429277 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
LDB3-205ENST00000429277 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
LDB3-205ENST00000429277 MAP4K4O95819 1239 aaPredicted RBP14.94□□□□□ -0.02
LDB3-205ENST00000429277 MAP3K12Q12852 859 aa14.94□□□□□ -0.02
LDB3-205ENST00000429277 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
LDB3-205ENST00000429277 IL1RAPL2Q9NP60 686 aa14.94□□□□□ -0.02
LDB3-205ENST00000429277 CASTP20810 708 aaKnown RBP14.94□□□□□ -0.02
LDB3-205ENST00000429277 TSG101Q99816 390 aa14.94□□□□□ -0.02
LDB3-205ENST00000429277 TOPBP1Q92547 1522 aa14.94□□□□□ -0.02
LDB3-205ENST00000429277 CTAGE5O15320 804 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 USP8P40818 1118 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 KIAA1328Q86T90 577 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 VPS36Q86VN1 386 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 ANO10Q9NW15 660 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 KIAA0586Q9BVV6 1533 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 ZSCAN12O43309 604 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 ENOX2Q16206 610 aaKnown RBP14.93□□□□□ -0.02
LDB3-205ENST00000429277 PPP4R3AQ6IN85 833 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 CTCFLQ8NI51 663 aaPredicted RBP14.93□□□□□ -0.02
LDB3-205ENST00000429277 NSD2O96028 1365 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 FKBP15Q5T1M5 1219 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 TMEM57Q8N5G2 664 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 EHMT1Q9H9B1 1298 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 TOP2BQ02880 1626 aa14.93□□□□□ -0.02
LDB3-205ENST00000429277 NEBLO76041 1014 aa14.92□□□□□ -0.02
LDB3-205ENST00000429277 MCM3P25205 808 aa14.92□□□□□ -0.02
LDB3-205ENST00000429277 DHX29Q7Z478 1369 aaKnown RBP14.92□□□□□ -0.02
LDB3-205ENST00000429277 SKIDA1Q1XH10 827 aa14.92□□□□□ -0.02
LDB3-205ENST00000429277 IQCA1Q86XH1 822 aa14.92□□□□□ -0.02
LDB3-205ENST00000429277 SEPT11Q9NVA2 429 aaKnown RBP14.92□□□□□ -0.02
LDB3-205ENST00000429277 PPP1R1BQ9UD71 204 aaPredicted RBP14.92□□□□□ -0.02
LDB3-205ENST00000429277 USP5P45974 858 aa14.92□□□□□ -0.02
LDB3-205ENST00000429277 NAPBQ9H115 298 aa14.92□□□□□ -0.02
LDB3-205ENST00000429277 HYPKQ9NX55 129 aa14.92□□□□□ -0.02
LDB3-205ENST00000429277 ANKRD62A6NC57 917 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 ZPR1O75312 459 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 SPA17Q15506 151 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 PYM1Q9BRP8 204 aaKnown RBP14.91□□□□□ -0.02
LDB3-205ENST00000429277 TEX13AQ9BXU3 409 aaPredicted RBP14.91□□□□□ -0.02
LDB3-205ENST00000429277 PTPRCP08575 1304 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 SLC5A1P13866 664 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 ABCF2Q9UG63 623 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 POLR3DP05423 398 aaPredicted RBP14.91□□□□□ -0.02
LDB3-205ENST00000429277 TMEM266Q2M3C6 531 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 CFAP100Q494V2 611 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 MKNK2Q9HBH9 465 aa14.91□□□□□ -0.02
LDB3-205ENST00000429277 MATR3P43243 847 aaKnown RBP eCLIP14.9□□□□□ -0.02
LDB3-205ENST00000429277 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
LDB3-205ENST00000429277 LRPPRCP42704 1394 aaKnown RBP14.9□□□□□ -0.02
LDB3-205ENST00000429277 SFPQP23246 707 aaKnown RBP eCLIP14.9□□□□□ -0.02
LDB3-205ENST00000429277 STK11IPQ8N1F8 1099 aa14.9□□□□□ -0.02
LDB3-205ENST00000429277 CRACR2BQ8N4Y2 399 aaPredicted RBP14.9□□□□□ -0.02
LDB3-205ENST00000429277 TTC21BQ7Z4L5 1316 aa14.9□□□□□ -0.02
LDB3-205ENST00000429277 MAP9Q49MG5 647 aa14.89□□□□□ -0.03
LDB3-205ENST00000429277 UBXN4Q92575 508 aa14.89□□□□□ -0.03
LDB3-205ENST00000429277 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
LDB3-205ENST00000429277 CCDC12Q8WUD4 166 aaPredicted RBP14.89□□□□□ -0.03
LDB3-205ENST00000429277 CUL5Q93034 780 aa14.89□□□□□ -0.03
LDB3-205ENST00000429277 DBF4Q9UBU7 674 aaPredicted RBP14.89□□□□□ -0.03
LDB3-205ENST00000429277 LRRFIP2Q9Y608 721 aaKnown RBP14.89□□□□□ -0.03
LDB3-205ENST00000429277 NKTRP30414 1462 aaKnown RBP14.89□□□□□ -0.03
LDB3-205ENST00000429277 CCDC183Q5T5S1 534 aa14.89□□□□□ -0.03
LDB3-205ENST00000429277 EXOC6BQ9Y2D4 811 aa14.89□□□□□ -0.03
LDB3-205ENST00000429277 RAPGEF3O95398 923 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 FILIP1Q7Z7B0 1213 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 C8orf76Q96K31 380 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 TTF1Q15361 905 aaPredicted RBP14.88□□□□□ -0.03
LDB3-205ENST00000429277 DZIP1Q86YF9 867 aaKnown RBP14.88□□□□□ -0.03
LDB3-205ENST00000429277 CCDC83Q8IWF9 413 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 INCENPQ9NQS7 918 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 ZC3H6P61129 1189 aaKnown RBP14.88□□□□□ -0.03
LDB3-205ENST00000429277 NUTM1Q86Y26 1132 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 NEMFO60524 1076 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 DNAAF4Q8WXU2 420 aa14.88□□□□□ -0.03
LDB3-205ENST00000429277 CCDC91Q7Z6B0 441 aa14.87□□□□□ -0.03
LDB3-205ENST00000429277 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
LDB3-205ENST00000429277 TAX1BP1Q86VP1 789 aa14.87□□□□□ -0.03
LDB3-205ENST00000429277 ANKRD18BA2A2Z9 1011 aa14.87□□□□□ -0.03
LDB3-205ENST00000429277 LDHCP07864 332 aa14.87□□□□□ -0.03
LDB3-205ENST00000429277 PRPF40BQ6NWY9 871 aaKnown RBP14.87□□□□□ -0.03
LDB3-205ENST00000429277 ZNF213O14771 459 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 MAGI1Q96QZ7 1491 aaPredicted RBP14.86□□□□□ -0.03
LDB3-205ENST00000429277 ESPNB1AK53 854 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 RARSP54136 660 aaKnown RBP14.86□□□□□ -0.03
LDB3-205ENST00000429277 CRACR2AQ9BSW2 395 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 SLC12A7Q9Y666 1083 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 A0A087WZG4 1122 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 KIF5CO60282 957 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 ZSCAN30Q86W11 494 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms