RNA–Protein interactions for RNA: ENST00000429040.5

SLC39A1-207, Transcript of solute carrier family 39 member 1, humanhuman

TSL 2

Gene SLC39A1, Length 1,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-207ENST00000429040 SIK1P57059 783 aa22.6■■□□□ 1.21
SLC39A1-207ENST00000429040 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
SLC39A1-207ENST00000429040 AMOTQ4VCS5 1084 aa22.6■■□□□ 1.21
SLC39A1-207ENST00000429040 AK7Q96M32 723 aa22.6■■□□□ 1.21
SLC39A1-207ENST00000429040 ASAP1Q9ULH1 1129 aa22.6■■□□□ 1.21
SLC39A1-207ENST00000429040 CCDC184Q52MB2 194 aa22.59■■□□□ 1.21
SLC39A1-207ENST00000429040 AEBP1Q8IUX7 1158 aa22.59■■□□□ 1.21
SLC39A1-207ENST00000429040 NUDCQ9Y266 331 aa22.59■■□□□ 1.21
SLC39A1-207ENST00000429040 ERVV-2B6SEH9 535 aa22.58■■□□□ 1.21
SLC39A1-207ENST00000429040 ZNF530Q6P9A1 599 aaPredicted RBP22.58■■□□□ 1.21
SLC39A1-207ENST00000429040 DCAF5Q96JK2 942 aa22.58■■□□□ 1.21
SLC39A1-207ENST00000429040 ATG3Q9NT62 314 aa22.58■■□□□ 1.21
SLC39A1-207ENST00000429040 IL13P35225 146 aa22.57■■□□□ 1.2
SLC39A1-207ENST00000429040 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
SLC39A1-207ENST00000429040 SULT6B1Q6IMI4 303 aa22.57■■□□□ 1.2
SLC39A1-207ENST00000429040 ATP6V1AP38606 617 aa22.56■■□□□ 1.2
SLC39A1-207ENST00000429040 LINC00116Q8NCU8 138 aa22.56■■□□□ 1.2
SLC39A1-207ENST00000429040 PNISRQ8TF01 805 aaKnown RBP22.56■■□□□ 1.2
SLC39A1-207ENST00000429040 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
SLC39A1-207ENST00000429040 ITPK1Q13572 414 aa22.54■■□□□ 1.2
SLC39A1-207ENST00000429040 GPR162Q16538 588 aa22.54■■□□□ 1.2
SLC39A1-207ENST00000429040 C1orf141Q5JVX7 400 aa22.54■■□□□ 1.2
SLC39A1-207ENST00000429040 FAM9BQ8IZU0 186 aa22.54■■□□□ 1.2
SLC39A1-207ENST00000429040 KDRP35968 1356 aa22.53■■□□□ 1.2
SLC39A1-207ENST00000429040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.53■■□□□ 1.2
SLC39A1-207ENST00000429040 PHF14O94880 888 aa22.53■■□□□ 1.2
SLC39A1-207ENST00000429040 AMIGO3Q86WK7 504 aa22.53■■□□□ 1.2
SLC39A1-207ENST00000429040 UBR3Q6ZT12 1888 aa22.53■■□□□ 1.2
SLC39A1-207ENST00000429040 COL3A1P02461 1466 aaPredicted RBP22.53■■□□□ 1.2
SLC39A1-207ENST00000429040 KDM6AO15550 1401 aaPredicted RBP22.52■■□□□ 1.2
SLC39A1-207ENST00000429040 SSFA2P28290 1259 aa22.52■■□□□ 1.2
SLC39A1-207ENST00000429040 CABP4P57796 275 aa22.52■■□□□ 1.2
SLC39A1-207ENST00000429040 NLGN2Q8NFZ4 835 aa22.52■■□□□ 1.2
SLC39A1-207ENST00000429040 SMIM5Q71RC9 77 aa22.51■■□□□ 1.19
SLC39A1-207ENST00000429040 GNPATO15228 680 aa22.5■■□□□ 1.19
SLC39A1-207ENST00000429040 RBM42Q9BTD8 480 aaKnown RBP22.5■■□□□ 1.19
SLC39A1-207ENST00000429040 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
SLC39A1-207ENST00000429040 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
SLC39A1-207ENST00000429040 SLC4A9Q96Q91 983 aa22.47■■□□□ 1.19
SLC39A1-207ENST00000429040 CHD4Q14839 1912 aa22.47■■□□□ 1.19
SLC39A1-207ENST00000429040 ZNF831Q5JPB2 1677 aa22.46■■□□□ 1.19
SLC39A1-207ENST00000429040 HMOX1P09601 288 aa22.46■■□□□ 1.19
SLC39A1-207ENST00000429040 U2AF1L5P0DN76 240 aaPredicted RBP22.46■■□□□ 1.19
SLC39A1-207ENST00000429040 U2AF1Q01081 240 aaKnown RBP eCLIP22.46■■□□□ 1.19
SLC39A1-207ENST00000429040 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
SLC39A1-207ENST00000429040 PNNQ9H307 717 aaKnown RBP22.46■■□□□ 1.19
SLC39A1-207ENST00000429040 CD2APQ9Y5K6 639 aa22.46■■□□□ 1.19
SLC39A1-207ENST00000429040 AKAP4Q5JQC9 854 aa22.45■■□□□ 1.18
SLC39A1-207ENST00000429040 RTCBQ9Y3I0 505 aaKnown RBP22.44■■□□□ 1.18
SLC39A1-207ENST00000429040 TRAPPC3LQ5T215 181 aa22.43■■□□□ 1.18
SLC39A1-207ENST00000429040 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
SLC39A1-207ENST00000429040 ADAMTS8Q9UP79 889 aa22.43■■□□□ 1.18
SLC39A1-207ENST00000429040 PTCD1O75127 700 aaKnown RBP22.42■■□□□ 1.18
SLC39A1-207ENST00000429040 NEFMP07197 916 aa22.42■■□□□ 1.18
SLC39A1-207ENST00000429040 ZNF784Q8NCA9 323 aaPredicted RBP22.42■■□□□ 1.18
SLC39A1-207ENST00000429040 SCN11AQ9UI33 1791 aa22.42■■□□□ 1.18
SLC39A1-207ENST00000429040 CNTNAP4Q9C0A0 1308 aa22.41■■□□□ 1.18
SLC39A1-207ENST00000429040 COL5A3P25940 1745 aaPredicted RBP22.4■■□□□ 1.18
SLC39A1-207ENST00000429040 GRIN3BO60391 1043 aa22.4■■□□□ 1.18
SLC39A1-207ENST00000429040 YBX3P16989 372 aaKnown RBP eCLIP22.4■■□□□ 1.18
SLC39A1-207ENST00000429040 YTHDC1Q96MU7 727 aaKnown RBP22.4■■□□□ 1.18
SLC39A1-207ENST00000429040 RPS6KA4O75676 772 aa22.39■■□□□ 1.17
SLC39A1-207ENST00000429040 ADRA2BP18089 450 aa22.39■■□□□ 1.17
SLC39A1-207ENST00000429040 LGR6Q9HBX8 967 aa22.39■■□□□ 1.17
SLC39A1-207ENST00000429040 FCHSD2O94868 740 aa22.38■■□□□ 1.17
SLC39A1-207ENST00000429040 MTHFSDQ2M296 383 aaKnown RBP22.38■■□□□ 1.17
SLC39A1-207ENST00000429040 ARHGEF1Q92888 912 aaKnown RBP22.38■■□□□ 1.17
SLC39A1-207ENST00000429040 SLC52A2Q9HAB3 445 aa22.38■■□□□ 1.17
SLC39A1-207ENST00000429040 MAPK8IP3Q9UPT6 1336 aa22.37■■□□□ 1.17
SLC39A1-207ENST00000429040 RNMTO43148 476 aaKnown RBP22.37■■□□□ 1.17
SLC39A1-207ENST00000429040 MMP10P09238 476 aa22.36■■□□□ 1.17
SLC39A1-207ENST00000429040 RFC4P35249 363 aa22.36■■□□□ 1.17
SLC39A1-207ENST00000429040 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
SLC39A1-207ENST00000429040 NLGN1Q8N2Q7 840 aa22.36■■□□□ 1.17
SLC39A1-207ENST00000429040 RUNDC1Q96C34 613 aa22.36■■□□□ 1.17
SLC39A1-207ENST00000429040 CRKLP46109 303 aaKnown RBP22.34■■□□□ 1.17
SLC39A1-207ENST00000429040 NGEFQ8N5V2 710 aa22.34■■□□□ 1.17
SLC39A1-207ENST00000429040 MYH14Q7Z406 1995 aaKnown RBP22.33■■□□□ 1.17
SLC39A1-207ENST00000429040 MRC1P22897 1456 aa22.33■■□□□ 1.16
SLC39A1-207ENST00000429040 CICQ96RK0 1608 aaPredicted RBP22.32■■□□□ 1.16
SLC39A1-207ENST00000429040 TJP1Q07157 1748 aa22.32■■□□□ 1.16
SLC39A1-207ENST00000429040 VIRMAQ69YN4 1812 aaKnown RBP22.32■■□□□ 1.16
SLC39A1-207ENST00000429040 RSPH6AQ9H0K4 717 aa22.32■■□□□ 1.16
SLC39A1-207ENST00000429040 UTRNP46939 3433 aa22.32■■□□□ 1.16
SLC39A1-207ENST00000429040 GYS1P13807 737 aa22.31■■□□□ 1.16
SLC39A1-207ENST00000429040 SLC39A6Q13433 755 aa22.31■■□□□ 1.16
SLC39A1-207ENST00000429040 CCDC146Q8IYE0 955 aa22.31■■□□□ 1.16
SLC39A1-207ENST00000429040 ADAMTS7Q9UKP4 1686 aa22.3■■□□□ 1.16
SLC39A1-207ENST00000429040 PRKAR2BP31323 418 aa22.3■■□□□ 1.16
SLC39A1-207ENST00000429040 DNAJC10Q8IXB1 793 aa22.3■■□□□ 1.16
SLC39A1-207ENST00000429040 INTS5Q6P9B9 1019 aaKnown RBP22.29■■□□□ 1.16
SLC39A1-207ENST00000429040 GAS2L2Q8NHY3 880 aa22.29■■□□□ 1.16
SLC39A1-207ENST00000429040 C4AP0C0L4 1744 aa22.28■■□□□ 1.16
SLC39A1-207ENST00000429040 WWC3Q9ULE0 1092 aa22.28■■□□□ 1.16
SLC39A1-207ENST00000429040 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
SLC39A1-207ENST00000429040 PARP3Q9Y6F1 533 aa22.27■■□□□ 1.16
SLC39A1-207ENST00000429040 ZBED9Q6R2W3 1325 aa22.27■■□□□ 1.16
SLC39A1-207ENST00000429040 GNAT3A8MTJ3 354 aa22.26■■□□□ 1.15
SLC39A1-207ENST00000429040 PLEKHF1Q96S99 279 aa22.26■■□□□ 1.15
SLC39A1-207ENST00000429040 SRP68Q9UHB9 627 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms