RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 SMIM5Q71RC9 77 aa17.96■□□□□ 0.47
PCCA-206ENST00000428969 POLKQ9UBT6 870 aa17.96■□□□□ 0.47
PCCA-206ENST00000428969 KDRP35968 1356 aa17.95■□□□□ 0.46
PCCA-206ENST00000428969 MMP10P09238 476 aa17.95■□□□□ 0.46
PCCA-206ENST00000428969 ADRA2BP18089 450 aa17.95■□□□□ 0.46
PCCA-206ENST00000428969 TGFB2P61812 414 aa17.95■□□□□ 0.46
PCCA-206ENST00000428969 ATG3Q9NT62 314 aa17.95■□□□□ 0.46
PCCA-206ENST00000428969 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
PCCA-206ENST00000428969 NLGN1Q8N2Q7 840 aa17.94■□□□□ 0.46
PCCA-206ENST00000428969 RTCBQ9Y3I0 505 aaKnown RBP17.94■□□□□ 0.46
PCCA-206ENST00000428969 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
PCCA-206ENST00000428969 KIF3CO14782 793 aa17.93■□□□□ 0.46
PCCA-206ENST00000428969 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
PCCA-206ENST00000428969 TRAPPC3LQ5T215 181 aa17.93■□□□□ 0.46
PCCA-206ENST00000428969 WWC3Q9ULE0 1092 aa17.93■□□□□ 0.46
PCCA-206ENST00000428969 C10orf71Q711Q0 1435 aa17.92■□□□□ 0.46
PCCA-206ENST00000428969 EIF4A2Q14240 407 aaKnown RBP17.92■□□□□ 0.46
PCCA-206ENST00000428969 RC3H1Q5TC82 1133 aaKnown RBP17.92■□□□□ 0.46
PCCA-206ENST00000428969 TIMELESSQ9UNS1 1208 aa17.92■□□□□ 0.46
PCCA-206ENST00000428969 KIAA1551Q9HCM1 1747 aa17.92■□□□□ 0.46
PCCA-206ENST00000428969 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
PCCA-206ENST00000428969 CNTNAP4Q9C0A0 1308 aa17.91■□□□□ 0.46
PCCA-206ENST00000428969 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
PCCA-206ENST00000428969 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.46
PCCA-206ENST00000428969 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
PCCA-206ENST00000428969 RPS6KA4O75676 772 aa17.88■□□□□ 0.45
PCCA-206ENST00000428969 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
PCCA-206ENST00000428969 ARHGEF1Q92888 912 aaKnown RBP17.88■□□□□ 0.45
PCCA-206ENST00000428969 RBM42Q9BTD8 480 aaKnown RBP17.88■□□□□ 0.45
PCCA-206ENST00000428969 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
PCCA-206ENST00000428969 C4AP0C0L4 1744 aa17.88■□□□□ 0.45
PCCA-206ENST00000428969 TOMM70O94826 608 aa17.87■□□□□ 0.45
PCCA-206ENST00000428969 GYS1P13807 737 aa17.87■□□□□ 0.45
PCCA-206ENST00000428969 RFC4P35249 363 aa17.87■□□□□ 0.45
PCCA-206ENST00000428969 APLP1P51693 650 aa17.87■□□□□ 0.45
PCCA-206ENST00000428969 PLEKHO1Q53GL0 409 aaPredicted RBP17.87■□□□□ 0.45
PCCA-206ENST00000428969 SLC4A9Q96Q91 983 aa17.87■□□□□ 0.45
PCCA-206ENST00000428969 BRCA1P38398 1863 aaKnown RBP17.86■□□□□ 0.45
PCCA-206ENST00000428969 A0A0G2JLW4 131 aa17.86■□□□□ 0.45
PCCA-206ENST00000428969 PARP3Q9Y6F1 533 aa17.86■□□□□ 0.45
PCCA-206ENST00000428969 TNNT2P45379 298 aaPredicted RBP17.85■□□□□ 0.45
PCCA-206ENST00000428969 CABP4P57796 275 aa17.85■□□□□ 0.45
PCCA-206ENST00000428969 KDM6AO15550 1401 aaPredicted RBP17.84■□□□□ 0.45
PCCA-206ENST00000428969 ARHGAP27Q6ZUM4 889 aa17.84■□□□□ 0.45
PCCA-206ENST00000428969 MYH14Q7Z406 1995 aaKnown RBP17.84■□□□□ 0.45
PCCA-206ENST00000428969 ARFGEF1Q9Y6D6 1849 aa17.84■□□□□ 0.45
PCCA-206ENST00000428969 FCHSD2O94868 740 aa17.83■□□□□ 0.44
PCCA-206ENST00000428969 DPEP1P16444 411 aa17.83■□□□□ 0.44
PCCA-206ENST00000428969 ZNF530Q6P9A1 599 aaPredicted RBP17.83■□□□□ 0.44
PCCA-206ENST00000428969 MTHFSP49914 203 aa17.82■□□□□ 0.44
PCCA-206ENST00000428969 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
PCCA-206ENST00000428969 C1orf141Q5JVX7 400 aa17.82■□□□□ 0.44
PCCA-206ENST00000428969 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
PCCA-206ENST00000428969 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
PCCA-206ENST00000428969 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
PCCA-206ENST00000428969 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
PCCA-206ENST00000428969 USP42Q9H9J4 1324 aaKnown RBP17.79■□□□□ 0.44
PCCA-206ENST00000428969 KCNA3P22001 575 aa17.79■□□□□ 0.44
PCCA-206ENST00000428969 RBM46Q8TBY0 533 aaKnown RBP17.79■□□□□ 0.44
PCCA-206ENST00000428969 PTCD1O75127 700 aaKnown RBP17.78■□□□□ 0.44
PCCA-206ENST00000428969 DALRD3Q5D0E6 543 aaKnown RBP17.78■□□□□ 0.44
PCCA-206ENST00000428969 C9orf131Q5VYM1 1079 aa17.78■□□□□ 0.44
PCCA-206ENST00000428969 DNAJC5GQ8N7S2 189 aa17.78■□□□□ 0.44
PCCA-206ENST00000428969 NMRK2Q9NPI5 230 aa17.78■□□□□ 0.44
PCCA-206ENST00000428969 C16orf71Q8IYS4 520 aaPredicted RBP17.77■□□□□ 0.44
PCCA-206ENST00000428969 NFATC2IPQ8NCF5 419 aa17.77■□□□□ 0.44
PCCA-206ENST00000428969 PANK3Q9H999 370 aa17.77■□□□□ 0.44
PCCA-206ENST00000428969 TJP1Q07157 1748 aa17.77■□□□□ 0.44
PCCA-206ENST00000428969 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
PCCA-206ENST00000428969 FSTL1Q12841 308 aa17.76■□□□□ 0.43
PCCA-206ENST00000428969 FKBP8Q14318 412 aa17.76■□□□□ 0.43
PCCA-206ENST00000428969 EIF4G2P78344 907 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCCA-206ENST00000428969 MORC1Q86VD1 984 aa17.75■□□□□ 0.43
PCCA-206ENST00000428969 AEBP1Q8IUX7 1158 aa17.75■□□□□ 0.43
PCCA-206ENST00000428969 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
PCCA-206ENST00000428969 SCN11AQ9UI33 1791 aa17.75■□□□□ 0.43
PCCA-206ENST00000428969 WDR90Q96KV7 1748 aa17.75■□□□□ 0.43
PCCA-206ENST00000428969 DDR1Q08345 913 aa17.74■□□□□ 0.43
PCCA-206ENST00000428969 SULT6B1Q6IMI4 303 aa17.74■□□□□ 0.43
PCCA-206ENST00000428969 ADAMTS7Q9UKP4 1686 aa17.74■□□□□ 0.43
PCCA-206ENST00000428969 ZC3H4Q9UPT8 1303 aaKnown RBP17.73■□□□□ 0.43
PCCA-206ENST00000428969 POLRMTO00411 1230 aaKnown RBP17.73■□□□□ 0.43
PCCA-206ENST00000428969 TM4SF1P30408 202 aa17.73■□□□□ 0.43
PCCA-206ENST00000428969 AKAP4Q5JQC9 854 aa17.73■□□□□ 0.43
PCCA-206ENST00000428969 INTS5Q6P9B9 1019 aaKnown RBP17.73■□□□□ 0.43
PCCA-206ENST00000428969 RNF181Q9P0P0 153 aa17.73■□□□□ 0.43
PCCA-206ENST00000428969 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
PCCA-206ENST00000428969 ZPR1O75312 459 aa17.72■□□□□ 0.43
PCCA-206ENST00000428969 IL13P35225 146 aa17.71■□□□□ 0.43
PCCA-206ENST00000428969 SLC52A2Q9HAB3 445 aa17.71■□□□□ 0.43
PCCA-206ENST00000428969 KCPQ6ZWJ8 1503 aa17.71■□□□□ 0.43
PCCA-206ENST00000428969 SBF1O95248 1867 aa17.71■□□□□ 0.43
PCCA-206ENST00000428969 SOS1Q07889 1333 aaPredicted RBP17.71■□□□□ 0.42
PCCA-206ENST00000428969 MRC1P22897 1456 aa17.7■□□□□ 0.42
PCCA-206ENST00000428969 HSPA5P11021 654 aaKnown RBP17.69■□□□□ 0.42
PCCA-206ENST00000428969 CHRNA5P30532 468 aa17.69■□□□□ 0.42
PCCA-206ENST00000428969 USPL1Q5W0Q7 1092 aa17.69■□□□□ 0.42
PCCA-206ENST00000428969 KLRG1Q96E93 195 aa17.69■□□□□ 0.42
PCCA-206ENST00000428969 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
PCCA-206ENST00000428969 CYP19A1P11511 503 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms