RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 AMIGO3Q86WK7 504 aa26.12■■□□□ 1.77
HLCS-204ENST00000427746 FLAD1Q8NFF5 587 aa26.12■■□□□ 1.77
HLCS-204ENST00000427746 AKAP4Q5JQC9 854 aa26.11■■□□□ 1.77
HLCS-204ENST00000427746 AK7Q96M32 723 aa26.11■■□□□ 1.77
HLCS-204ENST00000427746 ZNF831Q5JPB2 1677 aa26.11■■□□□ 1.77
HLCS-204ENST00000427746 MSH5O43196 834 aa26.1■■□□□ 1.77
HLCS-204ENST00000427746 POLD1P28340 1107 aa26.1■■□□□ 1.77
HLCS-204ENST00000427746 ATP6V1AP38606 617 aa26.1■■□□□ 1.77
HLCS-204ENST00000427746 UBR3Q6ZT12 1888 aa26.1■■□□□ 1.77
HLCS-204ENST00000427746 SLC4A9Q96Q91 983 aa26.09■■□□□ 1.77
HLCS-204ENST00000427746 SCN11AQ9UI33 1791 aa26.09■■□□□ 1.77
HLCS-204ENST00000427746 NFATC2IPQ8NCF5 419 aa26.08■■□□□ 1.77
HLCS-204ENST00000427746 MTHFSDQ2M296 383 aaKnown RBP26.07■■□□□ 1.76
HLCS-204ENST00000427746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.05■■□□□ 1.76
HLCS-204ENST00000427746 SSFA2P28290 1259 aa26.05■■□□□ 1.76
HLCS-204ENST00000427746 PPP2R1AP30153 589 aa26.05■■□□□ 1.76
HLCS-204ENST00000427746 ADAMTS7Q9UKP4 1686 aa26.05■■□□□ 1.76
HLCS-204ENST00000427746 U2SURPO15042 1029 aaKnown RBP26.04■■□□□ 1.76
HLCS-204ENST00000427746 SMIM5Q71RC9 77 aa26.04■■□□□ 1.76
HLCS-204ENST00000427746 RBM42Q9BTD8 480 aaKnown RBP26.04■■□□□ 1.76
HLCS-204ENST00000427746 LGR6Q9HBX8 967 aa26.04■■□□□ 1.76
HLCS-204ENST00000427746 MRC1P22897 1456 aa26.04■■□□□ 1.76
HLCS-204ENST00000427746 DCAF8L1A6NGE4 600 aa26.03■■□□□ 1.76
HLCS-204ENST00000427746 MSL1Q68DK7 614 aa26.03■■□□□ 1.76
HLCS-204ENST00000427746 CFAP53Q96M91 514 aa26.03■■□□□ 1.76
HLCS-204ENST00000427746 COL5A3P25940 1745 aaPredicted RBP26.02■■□□□ 1.76
HLCS-204ENST00000427746 RNMTO43148 476 aaKnown RBP26.02■■□□□ 1.76
HLCS-204ENST00000427746 PHF14O94880 888 aa26.02■■□□□ 1.76
HLCS-204ENST00000427746 SLC52A2Q9HAB3 445 aa26.02■■□□□ 1.76
HLCS-204ENST00000427746 GNPATO15228 680 aa26.01■■□□□ 1.75
HLCS-204ENST00000427746 PTCD1O75127 700 aaKnown RBP25.99■■□□□ 1.75
HLCS-204ENST00000427746 RC3H1Q5TC82 1133 aaKnown RBP25.99■■□□□ 1.75
HLCS-204ENST00000427746 CICQ96RK0 1608 aaPredicted RBP25.99■■□□□ 1.75
HLCS-204ENST00000427746 CNTNAP4Q9C0A0 1308 aa25.98■■□□□ 1.75
HLCS-204ENST00000427746 VIRMAQ69YN4 1812 aaKnown RBP25.98■■□□□ 1.75
HLCS-204ENST00000427746 UTRNP46939 3433 aa25.97■■□□□ 1.75
HLCS-204ENST00000427746 KLHL34Q8N239 644 aa25.96■■□□□ 1.75
HLCS-204ENST00000427746 RSPH6AQ9H0K4 717 aa25.96■■□□□ 1.75
HLCS-204ENST00000427746 TJP1Q07157 1748 aa25.96■■□□□ 1.75
HLCS-204ENST00000427746 GAS2L2Q8NHY3 880 aa25.95■■□□□ 1.74
HLCS-204ENST00000427746 NUDCQ9Y266 331 aa25.95■■□□□ 1.74
HLCS-204ENST00000427746 RTCBQ9Y3I0 505 aaKnown RBP25.95■■□□□ 1.74
HLCS-204ENST00000427746 NLGN2Q8NFZ4 835 aa25.94■■□□□ 1.74
HLCS-204ENST00000427746 PRKAR2BP31323 418 aa25.93■■□□□ 1.74
HLCS-204ENST00000427746 PHACTR3Q96KR7 559 aa25.93■■□□□ 1.74
HLCS-204ENST00000427746 RPS6KA4O75676 772 aa25.92■■□□□ 1.74
HLCS-204ENST00000427746 ADRA2BP18089 450 aa25.92■■□□□ 1.74
HLCS-204ENST00000427746 TRAPPC3LQ5T215 181 aa25.92■■□□□ 1.74
HLCS-204ENST00000427746 MYH14Q7Z406 1995 aaKnown RBP25.92■■□□□ 1.74
HLCS-204ENST00000427746 KCPQ6ZWJ8 1503 aa25.92■■□□□ 1.74
HLCS-204ENST00000427746 GNAT3A8MTJ3 354 aa25.91■■□□□ 1.74
HLCS-204ENST00000427746 SLC39A6Q13433 755 aa25.91■■□□□ 1.74
HLCS-204ENST00000427746 IL17REQ8NFR9 667 aa25.91■■□□□ 1.74
HLCS-204ENST00000427746 GOLGB1Q14789 3259 aaKnown RBP25.9■■□□□ 1.74
HLCS-204ENST00000427746 U2AF1L5P0DN76 240 aaPredicted RBP25.9■■□□□ 1.74
HLCS-204ENST00000427746 YY1P25490 414 aa25.9■■□□□ 1.74
HLCS-204ENST00000427746 CRKLP46109 303 aaKnown RBP25.9■■□□□ 1.74
HLCS-204ENST00000427746 U2AF1Q01081 240 aaKnown RBP eCLIP25.9■■□□□ 1.74
HLCS-204ENST00000427746 ARHGEF1Q92888 912 aaKnown RBP25.9■■□□□ 1.74
HLCS-204ENST00000427746 CD2APQ9Y5K6 639 aa25.89■■□□□ 1.74
HLCS-204ENST00000427746 FCHSD2O94868 740 aa25.88■■□□□ 1.73
HLCS-204ENST00000427746 UBR2Q8IWV8 1755 aa25.87■■□□□ 1.73
HLCS-204ENST00000427746 CEMIPQ8WUJ3 1361 aa25.87■■□□□ 1.73
HLCS-204ENST00000427746 INTS5Q6P9B9 1019 aaKnown RBP25.87■■□□□ 1.73
HLCS-204ENST00000427746 DNAJC10Q8IXB1 793 aa25.87■■□□□ 1.73
HLCS-204ENST00000427746 C4AP0C0L4 1744 aa25.86■■□□□ 1.73
HLCS-204ENST00000427746 SIPA1L3O60292 1781 aaPredicted RBP25.86■■□□□ 1.73
HLCS-204ENST00000427746 GPR162Q16538 588 aa25.85■■□□□ 1.73
HLCS-204ENST00000427746 VSIG10Q8N0Z9 540 aa25.85■■□□□ 1.73
HLCS-204ENST00000427746 CYP19A1P11511 503 aaPredicted RBP25.84■■□□□ 1.73
HLCS-204ENST00000427746 GYS1P13807 737 aa25.84■■□□□ 1.73
HLCS-204ENST00000427746 RFC4P35249 363 aa25.84■■□□□ 1.73
HLCS-204ENST00000427746 TEFQ10587 303 aa25.84■■□□□ 1.73
HLCS-204ENST00000427746 NLGN1Q8N2Q7 840 aa25.84■■□□□ 1.73
HLCS-204ENST00000427746 MMP10P09238 476 aa25.83■■□□□ 1.73
HLCS-204ENST00000427746 CCDC87Q9NVE4 849 aa25.82■■□□□ 1.72
HLCS-204ENST00000427746 DDX10Q13206 875 aaKnown RBP25.8■■□□□ 1.72
HLCS-204ENST00000427746 ZNF790Q6PG37 636 aa25.8■■□□□ 1.72
HLCS-204ENST00000427746 TTC5Q8N0Z6 440 aa25.8■■□□□ 1.72
HLCS-204ENST00000427746 USP42Q9H9J4 1324 aaKnown RBP25.8■■□□□ 1.72
HLCS-204ENST00000427746 YBX3P16989 372 aaKnown RBP eCLIP25.79■■□□□ 1.72
HLCS-204ENST00000427746 PELP1Q8IZL8 1130 aaKnown RBP25.79■■□□□ 1.72
HLCS-204ENST00000427746 SOS1Q07889 1333 aaPredicted RBP25.79■■□□□ 1.72
HLCS-204ENST00000427746 RALBP1Q15311 655 aa25.78■■□□□ 1.72
HLCS-204ENST00000427746 ZNF496Q96IT1 587 aaPredicted RBP25.78■■□□□ 1.72
HLCS-204ENST00000427746 SRP68Q9UHB9 627 aaKnown RBP25.77■■□□□ 1.72
HLCS-204ENST00000427746 ZBTB1Q9Y2K1 713 aa25.76■■□□□ 1.71
HLCS-204ENST00000427746 HEG1Q9ULI3 1381 aa25.76■■□□□ 1.71
HLCS-204ENST00000427746 CHD4Q14839 1912 aa25.76■■□□□ 1.71
HLCS-204ENST00000427746 HTATSF1O43719 755 aaKnown RBP25.75■■□□□ 1.71
HLCS-204ENST00000427746 MCM10Q7L590 875 aa25.75■■□□□ 1.71
HLCS-204ENST00000427746 PLEKHF1Q96S99 279 aa25.75■■□□□ 1.71
HLCS-204ENST00000427746 KIF13BQ9NQT8 1826 aa25.74■■□□□ 1.71
HLCS-204ENST00000427746 BTBD11A6QL63 1104 aa25.74■■□□□ 1.71
HLCS-204ENST00000427746 FKBP8Q14318 412 aa25.74■■□□□ 1.71
HLCS-204ENST00000427746 RTF1Q92541 710 aaKnown RBP25.74■■□□□ 1.71
HLCS-204ENST00000427746 C10orf71Q711Q0 1435 aa25.73■■□□□ 1.71
HLCS-204ENST00000427746 COL15A1P39059 1388 aa25.72■■□□□ 1.71
HLCS-204ENST00000427746 KCNQ3O43525 872 aa25.72■■□□□ 1.71
HLCS-204ENST00000427746 GRIN3BO60391 1043 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms