RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TRAIPQ9BWF2 469 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 CDK19Q9BWU1 502 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 GAPVD1Q14C86 1478 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 SPOCK2Q92563 424 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 LRRCC1Q9C099 1032 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 FRMD4BQ9Y2L6 1034 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 CC2D2AQ9P2K1 1620 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 TTC21AQ8NDW8 1320 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 SCAPERQ9BY12 1400 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 NUCB2P80303 420 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 TMEM266Q2M3C6 531 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 MRVI1Q9Y6F6 885 aa6.7□□□□□ -1.34
HERC4-206ENST00000427635 PDCP20941 246 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 GSTO1P78417 241 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 RINLQ6ZS11 566 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 OGFOD1Q8N543 542 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 TSNARE1Q96NA8 513 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 IPO9Q96P70 1041 aaKnown RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 RIPOR2Q9Y4F9 1068 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 SYNJ2O15056 1496 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 CCT4P50991 539 aaKnown RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 HDAC1Q13547 482 aaPredicted RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 JDP2Q8WYK2 163 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 RAB34Q9BZG1 259 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 COG6Q9Y2V7 657 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 NOC2LQ9Y3T9 749 aaKnown RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 CDC45O75419 566 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 SLU7O95391 586 aaKnown RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 LDHCP07864 332 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 PPP4R3BQ5MIZ7 849 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 RETREG2Q8NC44 543 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 IFT57Q9NWB7 429 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 APAF1O14727 1248 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 IDH1O75874 414 aaKnown RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 DHX8Q14562 1220 aaKnown RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 STXBP4Q6ZWJ1 553 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 PAIP2Q9BPZ3 127 aaKnown RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 CCDC39Q9UFE4 941 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 MPRIPQ6WCQ1 1025 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 ZNF397Q8NF99 534 aaPredicted RBP6.69□□□□□ -1.34
HERC4-206ENST00000427635 MICAL1Q8TDZ2 1067 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 PPM1EQ8WY54 764 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 DISP3Q9P2K9 1392 aa6.69□□□□□ -1.34
HERC4-206ENST00000427635 ANKRD18BA2A2Z9 1011 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 ZNF771Q7L3S4 317 aaPredicted RBP6.68□□□□□ -1.34
HERC4-206ENST00000427635 PPP1R42Q7Z4L9 355 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 TAF4BQ92750 862 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 STK32BQ9NY57 414 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 GOLGA6L7A0A1B0GV03 622 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 TMEM132EQ6IEE7 984 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 IQCEQ6IPM2 695 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 BAG3O95817 575 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 IMMTQ16891 758 aaKnown RBP6.68□□□□□ -1.34
HERC4-206ENST00000427635 KMT5BQ4FZB7 885 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 CDC5LQ99459 802 aaKnown RBP6.68□□□□□ -1.34
HERC4-206ENST00000427635 UBA5Q9GZZ9 404 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 RBM19Q9Y4C8 960 aaKnown RBP6.68□□□□□ -1.34
HERC4-206ENST00000427635 MSH6P52701 1360 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 FERP16591 822 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 CKAP2LQ8IYA6 745 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 C8orf37Q96NL8 207 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 MYOM3Q5VTT5 1437 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 FGFR1OPO95684 399 aaKnown RBP6.68□□□□□ -1.34
HERC4-206ENST00000427635 TRAF1Q13077 416 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 KIF22Q14807 665 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 TAX1BP1Q86VP1 789 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 BICD1Q96G01 975 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 DDX23Q9BUQ8 820 aaKnown RBP6.68□□□□□ -1.34
HERC4-206ENST00000427635 TEX13AQ9BXU3 409 aaPredicted RBP6.68□□□□□ -1.34
HERC4-206ENST00000427635 SAMM50Q9Y512 469 aa6.68□□□□□ -1.34
HERC4-206ENST00000427635 PLEKHH2Q8IVE3 1493 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 PRC1O43663 620 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 BMS1Q14692 1282 aaKnown RBP6.67□□□□□ -1.34
HERC4-206ENST00000427635 SRCIN1Q9C0H9 1055 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 KIF20AO95235 890 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 SERPINC1P01008 464 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 CTNNA2P26232 953 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 CCDC125Q86Z20 511 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 SLC26A8Q96RN1 970 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 USP47Q96K76 1375 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 H0YHG0 523 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 CBFA2T2O43439 604 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 LMAN1P49257 510 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 PLS1Q14651 629 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 SPATA32Q96LK8 384 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 NOD1Q9Y239 953 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 CETN1Q12798 172 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 MAP3K12Q12852 859 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 HOOK3Q86VS8 718 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 TRMT112Q9UI30 125 aaKnown RBP6.67□□□□□ -1.34
HERC4-206ENST00000427635 MINDY4BA8MYZ0 360 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 TNNI2P48788 182 aa6.67□□□□□ -1.34
HERC4-206ENST00000427635 ZC3H15Q8WU90 426 aaKnown RBP6.67□□□□□ -1.34
HERC4-206ENST00000427635 METTL14Q9HCE5 456 aaKnown RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 SLC52A1Q9NWF4 448 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 CNTLNQ9NXG0 1405 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 CYP46A1Q9Y6A2 500 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 CUX1P39880 1505 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 FLIIQ13045 1269 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 SULT6B1Q6IMI4 303 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms