RNA–Protein interactions for RNA: ENST00000427589.2

TRBV29OR9-2-201, Transcript of T cell receptor beta variable 29/OR9-2 (non-functional), humanhuman

BASIC

Gene TRBV29OR9-2, Length 333 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV29OR9-2-201ENST00000427589 NPC1L1Q9UHC9 1359 aa9.29□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 ZNF530Q6P9A1 599 aaPredicted RBP9.29□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 COL23A1Q86Y22 540 aaPredicted RBP9.29□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 SBF1O95248 1867 aa9.29□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 BCORQ6W2J9 1755 aa9.29□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 KDM3BQ7LBC6 1761 aa9.29□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 ANKRD31Q8N7Z5 1873 aa9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 DLEC1Q9Y238 1755 aa9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 KCPQ6ZWJ8 1503 aa9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 HMOX1P09601 288 aa9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 ITPK1Q13572 414 aa9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 LINC00116Q8NCU8 138 aa9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 FHDC1Q9C0D6 1143 aaPredicted RBP9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 TFCP2L1Q9NZI6 479 aa9.28□□□□□ -0.92
TRBV29OR9-2-201ENST00000427589 MSL1Q68DK7 614 aa9.27□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 TMOD3Q9NYL9 352 aa9.27□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 NUP98P52948 1817 aa9.26□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 SCN7AQ01118 1682 aa9.26□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 NRXN2Q9P2S2 1712 aa9.26□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 LOC102724428A0A0B4J2F2 783 aa9.26□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 SIK1P57059 783 aa9.26□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 PLEKHO1Q53GL0 409 aaPredicted RBP9.26□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 SYT17Q9BSW7 474 aa9.26□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 SMARCC1Q92922 1105 aaPredicted RBP9.25□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 ARXQ96QS3 562 aa9.25□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 MAP3K5Q99683 1374 aa9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 ERVV-2B6SEH9 535 aa9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 DIAPH1O60610 1272 aaKnown RBP9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 PHF14O94880 888 aa9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 NLGN2Q8NFZ4 835 aa9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 SLC16A10Q8TF71 515 aa9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 DCAF5Q96JK2 942 aa9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 LGR6Q9HBX8 967 aa9.24□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 COL11A2P13942 1736 aaPredicted RBP9.23□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 MSH5O43196 834 aa9.23□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 AMOTQ4VCS5 1084 aa9.23□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 AK7Q96M32 723 aa9.23□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 RBM42Q9BTD8 480 aaKnown RBP9.23□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 PPP2R1AP30153 589 aa9.22□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 CABP4P57796 275 aa9.22□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 C1orf141Q5JVX7 400 aa9.22□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 NFATC2IPQ8NCF5 419 aa9.22□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 ARFGEF2Q9Y6D5 1785 aa9.22□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 DICER1Q9UPY3 1922 aaKnown RBP9.21□□□□□ -0.93
TRBV29OR9-2-201ENST00000427589 U2SURPO15042 1029 aaKnown RBP9.21□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 GNPATO15228 680 aa9.21□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 RNMTO43148 476 aaKnown RBP9.21□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 HSP90AB1P08238 724 aaKnown RBP9.21□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 SLC39A6Q13433 755 aa9.21□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 AKAP4Q5JQC9 854 aa9.21□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 PTCD1O75127 700 aaKnown RBP9.2□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 POLD1P28340 1107 aa9.2□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 PHACTR3Q96KR7 559 aa9.2□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 SLC52A2Q9HAB3 445 aa9.2□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 ANKRD36CQ5JPF3 1778 aa9.19□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 SSFA2P28290 1259 aa9.19□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 CNTNAP4Q9C0A0 1308 aa9.19□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 YBX3P16989 372 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 YY1P25490 414 aa9.18□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 PRKAR2BP31323 418 aa9.18□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 CRKLP46109 303 aaKnown RBP9.18□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 LAMB2P55268 1798 aa9.18□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 DNAJC10Q8IXB1 793 aa9.18□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 IL17REQ8NFR9 667 aa9.18□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 FER1L6Q2WGJ9 1857 aa9.17□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 TIAM2Q8IVF5 1701 aa9.17□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 FLAD1Q8NFF5 587 aa9.17□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 SRP68Q9UHB9 627 aaKnown RBP9.17□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 WWC3Q9ULE0 1092 aa9.17□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 TAF1P21675 1872 aa9.17□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 PXDNLA1KZ92 1463 aa9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 C10orf71Q711Q0 1435 aa9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 CEMIPQ8WUJ3 1361 aa9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 RPS6KA4O75676 772 aa9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 RC3H1Q5TC82 1133 aaKnown RBP9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 INTS5Q6P9B9 1019 aaKnown RBP9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 PELP1Q8IZL8 1130 aaKnown RBP9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 RTCBQ9Y3I0 505 aaKnown RBP9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 SLX4Q8IY92 1834 aa9.16□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 KCNQ3O43525 872 aa9.15□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 GYS1P13807 737 aa9.15□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 ZBTB1Q9Y2K1 713 aa9.15□□□□□ -0.94
TRBV29OR9-2-201ENST00000427589 COL15A1P39059 1388 aa9.14□□□□□ -0.95
TRBV29OR9-2-201ENST00000427589 TNRC6CQ9HCJ0 1690 aaKnown RBP9.14□□□□□ -0.95
TRBV29OR9-2-201ENST00000427589 SOS1Q07889 1333 aaPredicted RBP9.14□□□□□ -0.95
TRBV29OR9-2-201ENST00000427589 GNAT3A8MTJ3 354 aa9.14□□□□□ -0.95
TRBV29OR9-2-201ENST00000427589 MMP10P09238 476 aa9.14□□□□□ -0.95
TRBV29OR9-2-201ENST00000427589 U2AF1L5P0DN76 240 aaPredicted RBP9.14□□□□□ -0.95
TRBV29OR9-2-201ENST00000427589 CYP19A1P11511 503 aaPredicted RBP9.14□□□□□ -0.95
TRBV29OR9-2-201ENST00000427589 U2AF1Q01081 240 aaKnown RBP eCLIP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms