RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 LINC00116Q8NCU8 138 aa25.87■■□□□ 1.73
COL9A2-204ENST00000427563 MTHFSDQ2M296 383 aaKnown RBP25.86■■□□□ 1.73
COL9A2-204ENST00000427563 AKAP4Q5JQC9 854 aa25.85■■□□□ 1.73
COL9A2-204ENST00000427563 SMIM5Q71RC9 77 aa25.85■■□□□ 1.73
COL9A2-204ENST00000427563 COL5A3P25940 1745 aaPredicted RBP25.85■■□□□ 1.73
COL9A2-204ENST00000427563 SLC16A10Q8TF71 515 aa25.84■■□□□ 1.73
COL9A2-204ENST00000427563 LGR6Q9HBX8 967 aa25.84■■□□□ 1.73
COL9A2-204ENST00000427563 MRC1P22897 1456 aa25.84■■□□□ 1.73
COL9A2-204ENST00000427563 U2SURPO15042 1029 aaKnown RBP25.83■■□□□ 1.73
COL9A2-204ENST00000427563 CABP4P57796 275 aa25.83■■□□□ 1.73
COL9A2-204ENST00000427563 NFATC2IPQ8NCF5 419 aa25.82■■□□□ 1.72
COL9A2-204ENST00000427563 ATP6V1AP38606 617 aa25.8■■□□□ 1.72
COL9A2-204ENST00000427563 TJP1Q07157 1748 aa25.8■■□□□ 1.72
COL9A2-204ENST00000427563 MYH14Q7Z406 1995 aaKnown RBP25.79■■□□□ 1.72
COL9A2-204ENST00000427563 RNMTO43148 476 aaKnown RBP25.79■■□□□ 1.72
COL9A2-204ENST00000427563 ARXQ96QS3 562 aa25.79■■□□□ 1.72
COL9A2-204ENST00000427563 FHDC1Q9C0D6 1143 aaPredicted RBP25.79■■□□□ 1.72
COL9A2-204ENST00000427563 CICQ96RK0 1608 aaPredicted RBP25.78■■□□□ 1.72
COL9A2-204ENST00000427563 RSPH6AQ9H0K4 717 aa25.78■■□□□ 1.72
COL9A2-204ENST00000427563 AK7Q96M32 723 aa25.77■■□□□ 1.72
COL9A2-204ENST00000427563 CFAP53Q96M91 514 aa25.77■■□□□ 1.72
COL9A2-204ENST00000427563 SLC52A2Q9HAB3 445 aa25.77■■□□□ 1.72
COL9A2-204ENST00000427563 PHACTR3Q96KR7 559 aa25.76■■□□□ 1.71
COL9A2-204ENST00000427563 SYT17Q9BSW7 474 aa25.76■■□□□ 1.71
COL9A2-204ENST00000427563 RBM42Q9BTD8 480 aaKnown RBP25.76■■□□□ 1.71
COL9A2-204ENST00000427563 SIPA1L3O60292 1781 aaPredicted RBP25.76■■□□□ 1.71
COL9A2-204ENST00000427563 MSH5O43196 834 aa25.75■■□□□ 1.71
COL9A2-204ENST00000427563 MSL1Q68DK7 614 aa25.75■■□□□ 1.71
COL9A2-204ENST00000427563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.74■■□□□ 1.71
COL9A2-204ENST00000427563 PHF14O94880 888 aa25.74■■□□□ 1.71
COL9A2-204ENST00000427563 KCPQ6ZWJ8 1503 aa25.73■■□□□ 1.71
COL9A2-204ENST00000427563 MAP3K5Q99683 1374 aa25.73■■□□□ 1.71
COL9A2-204ENST00000427563 PRKAR2BP31323 418 aa25.73■■□□□ 1.71
COL9A2-204ENST00000427563 UBR2Q8IWV8 1755 aa25.72■■□□□ 1.71
COL9A2-204ENST00000427563 PTCD1O75127 700 aaKnown RBP25.72■■□□□ 1.71
COL9A2-204ENST00000427563 HMGB2P26583 209 aaKnown RBP25.72■■□□□ 1.71
COL9A2-204ENST00000427563 DDX10Q13206 875 aaKnown RBP25.72■■□□□ 1.71
COL9A2-204ENST00000427563 FLAD1Q8NFF5 587 aa25.72■■□□□ 1.71
COL9A2-204ENST00000427563 GNPATO15228 680 aa25.71■■□□□ 1.71
COL9A2-204ENST00000427563 SSFA2P28290 1259 aa25.71■■□□□ 1.71
COL9A2-204ENST00000427563 SLC39A6Q13433 755 aa25.71■■□□□ 1.71
COL9A2-204ENST00000427563 IL17REQ8NFR9 667 aa25.71■■□□□ 1.71
COL9A2-204ENST00000427563 C4AP0C0L4 1744 aa25.69■■□□□ 1.7
COL9A2-204ENST00000427563 U2AF1L5P0DN76 240 aaPredicted RBP25.69■■□□□ 1.7
COL9A2-204ENST00000427563 POLD1P28340 1107 aa25.69■■□□□ 1.7
COL9A2-204ENST00000427563 U2AF1Q01081 240 aaKnown RBP eCLIP25.69■■□□□ 1.7
COL9A2-204ENST00000427563 GAS2L2Q8NHY3 880 aa25.69■■□□□ 1.7
COL9A2-204ENST00000427563 NUDCQ9Y266 331 aa25.69■■□□□ 1.7
COL9A2-204ENST00000427563 CNTNAP4Q9C0A0 1308 aa25.68■■□□□ 1.7
COL9A2-204ENST00000427563 RC3H1Q5TC82 1133 aaKnown RBP25.67■■□□□ 1.7
COL9A2-204ENST00000427563 GNAT3A8MTJ3 354 aa25.66■■□□□ 1.7
COL9A2-204ENST00000427563 CEMIPQ8WUJ3 1361 aa25.66■■□□□ 1.7
COL9A2-204ENST00000427563 UTRNP46939 3433 aa25.65■■□□□ 1.7
COL9A2-204ENST00000427563 FCHSD2O94868 740 aa25.65■■□□□ 1.7
COL9A2-204ENST00000427563 DLG5Q8TDM6 1919 aa25.63■■□□□ 1.69
COL9A2-204ENST00000427563 CRKLP46109 303 aaKnown RBP25.63■■□□□ 1.69
COL9A2-204ENST00000427563 DNAJC10Q8IXB1 793 aa25.63■■□□□ 1.69
COL9A2-204ENST00000427563 NLGN2Q8NFZ4 835 aa25.63■■□□□ 1.69
COL9A2-204ENST00000427563 RPS6KA4O75676 772 aa25.62■■□□□ 1.69
COL9A2-204ENST00000427563 ZEB1P37275 1124 aaPredicted RBP25.62■■□□□ 1.69
COL9A2-204ENST00000427563 RTCBQ9Y3I0 505 aaKnown RBP25.62■■□□□ 1.69
COL9A2-204ENST00000427563 INTS5Q6P9B9 1019 aaKnown RBP25.61■■□□□ 1.69
COL9A2-204ENST00000427563 KLHL34Q8N239 644 aa25.61■■□□□ 1.69
COL9A2-204ENST00000427563 ARHGEF1Q92888 912 aaKnown RBP25.61■■□□□ 1.69
COL9A2-204ENST00000427563 RALBP1Q15311 655 aa25.59■■□□□ 1.69
COL9A2-204ENST00000427563 TRAPPC3LQ5T215 181 aa25.59■■□□□ 1.69
COL9A2-204ENST00000427563 PLEKHF1Q96S99 279 aa25.59■■□□□ 1.69
COL9A2-204ENST00000427563 CYP19A1P11511 503 aaPredicted RBP25.58■■□□□ 1.69
COL9A2-204ENST00000427563 GOLGB1Q14789 3259 aaKnown RBP25.57■■□□□ 1.68
COL9A2-204ENST00000427563 ADRA2BP18089 450 aa25.57■■□□□ 1.68
COL9A2-204ENST00000427563 KCNQ3O43525 872 aa25.56■■□□□ 1.68
COL9A2-204ENST00000427563 TEFQ10587 303 aa25.56■■□□□ 1.68
COL9A2-204ENST00000427563 MCM10Q7L590 875 aa25.56■■□□□ 1.68
COL9A2-204ENST00000427563 GYS1P13807 737 aa25.55■■□□□ 1.68
COL9A2-204ENST00000427563 DCTN1Q14203 1278 aa25.55■■□□□ 1.68
COL9A2-204ENST00000427563 ZNF790Q6PG37 636 aa25.55■■□□□ 1.68
COL9A2-204ENST00000427563 ZNF496Q96IT1 587 aaPredicted RBP25.55■■□□□ 1.68
COL9A2-204ENST00000427563 VSIG10Q8N0Z9 540 aa25.54■■□□□ 1.68
COL9A2-204ENST00000427563 CCDC87Q9NVE4 849 aa25.54■■□□□ 1.68
COL9A2-204ENST00000427563 SRP68Q9UHB9 627 aaKnown RBP25.53■■□□□ 1.68
COL9A2-204ENST00000427563 KIAA1551Q9HCM1 1747 aa25.53■■□□□ 1.68
COL9A2-204ENST00000427563 SOS1Q07889 1333 aaPredicted RBP25.53■■□□□ 1.68
COL9A2-204ENST00000427563 KIF13BQ9NQT8 1826 aa25.53■■□□□ 1.68
COL9A2-204ENST00000427563 MMP10P09238 476 aa25.52■■□□□ 1.68
COL9A2-204ENST00000427563 ZBTB1Q9Y2K1 713 aa25.52■■□□□ 1.68
COL9A2-204ENST00000427563 MYBBP1AQ9BQG0 1328 aaKnown RBP25.52■■□□□ 1.68
COL9A2-204ENST00000427563 HEG1Q9ULI3 1381 aa25.52■■□□□ 1.68
COL9A2-204ENST00000427563 RFC4P35249 363 aa25.51■■□□□ 1.67
COL9A2-204ENST00000427563 CD2APQ9Y5K6 639 aa25.51■■□□□ 1.67
COL9A2-204ENST00000427563 TTC5Q8N0Z6 440 aa25.5■■□□□ 1.67
COL9A2-204ENST00000427563 USP42Q9H9J4 1324 aaKnown RBP25.5■■□□□ 1.67
COL9A2-204ENST00000427563 DCAF8L1A6NGE4 600 aa25.49■■□□□ 1.67
COL9A2-204ENST00000427563 CHD4Q14839 1912 aa25.49■■□□□ 1.67
COL9A2-204ENST00000427563 BTBD11A6QL63 1104 aa25.48■■□□□ 1.67
COL9A2-204ENST00000427563 HTATSF1O43719 755 aaKnown RBP25.48■■□□□ 1.67
COL9A2-204ENST00000427563 YBX3P16989 372 aaKnown RBP eCLIP25.47■■□□□ 1.67
COL9A2-204ENST00000427563 FKBP8Q14318 412 aa25.47■■□□□ 1.67
COL9A2-204ENST00000427563 NLGN1Q8N2Q7 840 aa25.47■■□□□ 1.67
COL9A2-204ENST00000427563 RTF1Q92541 710 aaKnown RBP25.47■■□□□ 1.67
COL9A2-204ENST00000427563 KDM3BQ7LBC6 1761 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms