RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 SLC16A10Q8TF71 515 aa21.74■■□□□ 1.07
HLA-DQB2-230ENST00000427449 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
HLA-DQB2-230ENST00000427449 FHDC1Q9C0D6 1143 aaPredicted RBP21.74■■□□□ 1.07
HLA-DQB2-230ENST00000427449 TMOD3Q9NYL9 352 aa21.74■■□□□ 1.07
HLA-DQB2-230ENST00000427449 DLG5Q8TDM6 1919 aa21.73■■□□□ 1.07
HLA-DQB2-230ENST00000427449 LOC102724428A0A0B4J2F2 783 aa21.73■■□□□ 1.07
HLA-DQB2-230ENST00000427449 SIK1P57059 783 aa21.73■■□□□ 1.07
HLA-DQB2-230ENST00000427449 SMIM5Q71RC9 77 aa21.73■■□□□ 1.07
HLA-DQB2-230ENST00000427449 SMARCC1Q92922 1105 aaPredicted RBP21.73■■□□□ 1.07
HLA-DQB2-230ENST00000427449 ERVV-2B6SEH9 535 aa21.72■■□□□ 1.07
HLA-DQB2-230ENST00000427449 AMOTQ4VCS5 1084 aa21.72■■□□□ 1.07
HLA-DQB2-230ENST00000427449 PLEKHO1Q53GL0 409 aaPredicted RBP21.72■■□□□ 1.07
HLA-DQB2-230ENST00000427449 TFCP2L1Q9NZI6 479 aa21.72■■□□□ 1.07
HLA-DQB2-230ENST00000427449 SYT17Q9BSW7 474 aa21.71■■□□□ 1.07
HLA-DQB2-230ENST00000427449 PPP1R1BQ9UD71 204 aaPredicted RBP21.71■■□□□ 1.07
HLA-DQB2-230ENST00000427449 BRCA1P38398 1863 aaKnown RBP21.69■■□□□ 1.06
HLA-DQB2-230ENST00000427449 HMOX1P09601 288 aa21.69■■□□□ 1.06
HLA-DQB2-230ENST00000427449 DIAPH1O60610 1272 aaKnown RBP21.68■■□□□ 1.06
HLA-DQB2-230ENST00000427449 ARXQ96QS3 562 aa21.68■■□□□ 1.06
HLA-DQB2-230ENST00000427449 HSP90AB1P08238 724 aaKnown RBP21.67■■□□□ 1.06
HLA-DQB2-230ENST00000427449 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
HLA-DQB2-230ENST00000427449 LGR6Q9HBX8 967 aa21.65■■□□□ 1.06
HLA-DQB2-230ENST00000427449 PPP2R1AP30153 589 aa21.64■■□□□ 1.05
HLA-DQB2-230ENST00000427449 AKAP4Q5JQC9 854 aa21.64■■□□□ 1.05
HLA-DQB2-230ENST00000427449 CNTNAP4Q9C0A0 1308 aa21.62■■□□□ 1.05
HLA-DQB2-230ENST00000427449 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.62■■□□□ 1.05
HLA-DQB2-230ENST00000427449 SSFA2P28290 1259 aa21.62■■□□□ 1.05
HLA-DQB2-230ENST00000427449 ATP6V1AP38606 617 aa21.62■■□□□ 1.05
HLA-DQB2-230ENST00000427449 MSL1Q68DK7 614 aa21.62■■□□□ 1.05
HLA-DQB2-230ENST00000427449 NFATC2IPQ8NCF5 419 aa21.62■■□□□ 1.05
HLA-DQB2-230ENST00000427449 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
HLA-DQB2-230ENST00000427449 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
HLA-DQB2-230ENST00000427449 C1orf141Q5JVX7 400 aa21.61■■□□□ 1.05
HLA-DQB2-230ENST00000427449 NLGN2Q8NFZ4 835 aa21.61■■□□□ 1.05
HLA-DQB2-230ENST00000427449 RSPH6AQ9H0K4 717 aa21.61■■□□□ 1.05
HLA-DQB2-230ENST00000427449 NRXN2Q9P2S2 1712 aa21.6■■□□□ 1.05
HLA-DQB2-230ENST00000427449 SCN7AQ01118 1682 aa21.6■■□□□ 1.05
HLA-DQB2-230ENST00000427449 AK7Q96M32 723 aa21.6■■□□□ 1.05
HLA-DQB2-230ENST00000427449 SLC52A2Q9HAB3 445 aa21.6■■□□□ 1.05
HLA-DQB2-230ENST00000427449 CEMIPQ8WUJ3 1361 aa21.6■■□□□ 1.05
HLA-DQB2-230ENST00000427449 AFDNP55196 1824 aaKnown RBP21.59■■□□□ 1.05
HLA-DQB2-230ENST00000427449 KDM3BQ7LBC6 1761 aa21.59■■□□□ 1.05
HLA-DQB2-230ENST00000427449 CABP4P57796 275 aa21.59■■□□□ 1.05
HLA-DQB2-230ENST00000427449 CNGB1Q14028 1251 aaPredicted RBP21.59■■□□□ 1.05
HLA-DQB2-230ENST00000427449 FLAD1Q8NFF5 587 aa21.58■■□□□ 1.05
HLA-DQB2-230ENST00000427449 BCORQ6W2J9 1755 aa21.57■■□□□ 1.04
HLA-DQB2-230ENST00000427449 GNPATO15228 680 aa21.57■■□□□ 1.04
HLA-DQB2-230ENST00000427449 PHF14O94880 888 aa21.57■■□□□ 1.04
HLA-DQB2-230ENST00000427449 PHACTR3Q96KR7 559 aa21.57■■□□□ 1.04
HLA-DQB2-230ENST00000427449 RC3H1Q5TC82 1133 aaKnown RBP21.56■■□□□ 1.04
HLA-DQB2-230ENST00000427449 LAMB4A4D0S4 1761 aa21.56■■□□□ 1.04
HLA-DQB2-230ENST00000427449 POLD1P28340 1107 aa21.54■■□□□ 1.04
HLA-DQB2-230ENST00000427449 IL17REQ8NFR9 667 aa21.54■■□□□ 1.04
HLA-DQB2-230ENST00000427449 RBM42Q9BTD8 480 aaKnown RBP21.54■■□□□ 1.04
HLA-DQB2-230ENST00000427449 DLEC1Q9Y238 1755 aa21.53■■□□□ 1.04
HLA-DQB2-230ENST00000427449 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
HLA-DQB2-230ENST00000427449 PTCD1O75127 700 aaKnown RBP21.53■■□□□ 1.04
HLA-DQB2-230ENST00000427449 SLC39A6Q13433 755 aa21.53■■□□□ 1.04
HLA-DQB2-230ENST00000427449 INTS5Q6P9B9 1019 aaKnown RBP21.53■■□□□ 1.04
HLA-DQB2-230ENST00000427449 C10orf71Q711Q0 1435 aa21.53■■□□□ 1.04
HLA-DQB2-230ENST00000427449 CRKLP46109 303 aaKnown RBP21.52■■□□□ 1.04
HLA-DQB2-230ENST00000427449 ARFGEF1Q9Y6D6 1849 aa21.51■■□□□ 1.03
HLA-DQB2-230ENST00000427449 MSH5O43196 834 aa21.51■■□□□ 1.03
HLA-DQB2-230ENST00000427449 RPS6KA4O75676 772 aa21.51■■□□□ 1.03
HLA-DQB2-230ENST00000427449 HMGB2P26583 209 aaKnown RBP21.51■■□□□ 1.03
HLA-DQB2-230ENST00000427449 PRKAR2BP31323 418 aa21.51■■□□□ 1.03
HLA-DQB2-230ENST00000427449 PXDNLA1KZ92 1463 aa21.51■■□□□ 1.03
HLA-DQB2-230ENST00000427449 YBX3P16989 372 aaKnown RBP eCLIP21.5■■□□□ 1.03
HLA-DQB2-230ENST00000427449 ARHGEF1Q92888 912 aaKnown RBP21.5■■□□□ 1.03
HLA-DQB2-230ENST00000427449 GYS1P13807 737 aa21.49■■□□□ 1.03
HLA-DQB2-230ENST00000427449 DNAJC10Q8IXB1 793 aa21.49■■□□□ 1.03
HLA-DQB2-230ENST00000427449 ANKRD31Q8N7Z5 1873 aa21.49■■□□□ 1.03
HLA-DQB2-230ENST00000427449 ADRA2BP18089 450 aa21.48■■□□□ 1.03
HLA-DQB2-230ENST00000427449 SOS1Q07889 1333 aaPredicted RBP21.48■■□□□ 1.03
HLA-DQB2-230ENST00000427449 CYP19A1P11511 503 aaPredicted RBP21.47■■□□□ 1.03
HLA-DQB2-230ENST00000427449 GAS2L2Q8NHY3 880 aa21.47■■□□□ 1.03
HLA-DQB2-230ENST00000427449 RTCBQ9Y3I0 505 aaKnown RBP21.47■■□□□ 1.03
HLA-DQB2-230ENST00000427449 CD2APQ9Y5K6 639 aa21.47■■□□□ 1.03
HLA-DQB2-230ENST00000427449 GNAT3A8MTJ3 354 aa21.46■■□□□ 1.03
HLA-DQB2-230ENST00000427449 USP42Q9H9J4 1324 aaKnown RBP21.46■■□□□ 1.03
HLA-DQB2-230ENST00000427449 YY1P25490 414 aa21.45■■□□□ 1.02
HLA-DQB2-230ENST00000427449 CFAP53Q96M91 514 aa21.45■■□□□ 1.02
HLA-DQB2-230ENST00000427449 PLEKHF1Q96S99 279 aa21.45■■□□□ 1.02
HLA-DQB2-230ENST00000427449 SRP68Q9UHB9 627 aaKnown RBP21.44■■□□□ 1.02
HLA-DQB2-230ENST00000427449 HEG1Q9ULI3 1381 aa21.44■■□□□ 1.02
HLA-DQB2-230ENST00000427449 COL11A2P13942 1736 aaPredicted RBP21.43■■□□□ 1.02
HLA-DQB2-230ENST00000427449 FCHSD2O94868 740 aa21.43■■□□□ 1.02
HLA-DQB2-230ENST00000427449 MMP10P09238 476 aa21.43■■□□□ 1.02
HLA-DQB2-230ENST00000427449 VSIG10Q8N0Z9 540 aa21.43■■□□□ 1.02
HLA-DQB2-230ENST00000427449 KLHL34Q8N239 644 aa21.43■■□□□ 1.02
HLA-DQB2-230ENST00000427449 ZNF496Q96IT1 587 aaPredicted RBP21.43■■□□□ 1.02
HLA-DQB2-230ENST00000427449 ZBTB1Q9Y2K1 713 aa21.43■■□□□ 1.02
HLA-DQB2-230ENST00000427449 KCNQ3O43525 872 aa21.42■■□□□ 1.02
HLA-DQB2-230ENST00000427449 COL15A1P39059 1388 aa21.42■■□□□ 1.02
HLA-DQB2-230ENST00000427449 TRAPPC3LQ5T215 181 aa21.42■■□□□ 1.02
HLA-DQB2-230ENST00000427449 CCDC87Q9NVE4 849 aa21.42■■□□□ 1.02
HLA-DQB2-230ENST00000427449 U2AF1L5P0DN76 240 aaPredicted RBP21.41■■□□□ 1.02
HLA-DQB2-230ENST00000427449 U2AF1Q01081 240 aaKnown RBP eCLIP21.41■■□□□ 1.02
HLA-DQB2-230ENST00000427449 DDR1Q08345 913 aa21.41■■□□□ 1.02
HLA-DQB2-230ENST00000427449 ZNF790Q6PG37 636 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms