RNA–Protein interactions for RNA: ENST00000427259.1

LINC00476-203, long intergenic non-protein coding RNA 476, humanhuman

TSL 2

Gene LINC00476, Length 893 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-203ENST00000427259 LINC00116Q8NCU8 138 aa17.97■□□□□ 0.47
LINC00476-203ENST00000427259 TMOD3Q9NYL9 352 aa17.97■□□□□ 0.47
LINC00476-203ENST00000427259 PLEKHG2Q9H7P9 1386 aa17.96■□□□□ 0.47
LINC00476-203ENST00000427259 MTHFSP49914 203 aa17.96■□□□□ 0.47
LINC00476-203ENST00000427259 SLC16A10Q8TF71 515 aa17.96■□□□□ 0.47
LINC00476-203ENST00000427259 ATG3Q9NT62 314 aa17.96■□□□□ 0.47
LINC00476-203ENST00000427259 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
LINC00476-203ENST00000427259 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
LINC00476-203ENST00000427259 LOC102724428A0A0B4J2F2 783 aa17.95■□□□□ 0.46
LINC00476-203ENST00000427259 SIK1P57059 783 aa17.95■□□□□ 0.46
LINC00476-203ENST00000427259 ZNF530Q6P9A1 599 aaPredicted RBP17.95■□□□□ 0.46
LINC00476-203ENST00000427259 SMARCC1Q92922 1105 aaPredicted RBP17.95■□□□□ 0.46
LINC00476-203ENST00000427259 SLC4A9Q96Q91 983 aa17.95■□□□□ 0.46
LINC00476-203ENST00000427259 ZNF831Q5JPB2 1677 aa17.94■□□□□ 0.46
LINC00476-203ENST00000427259 MYH14Q7Z406 1995 aaKnown RBP17.93■□□□□ 0.46
LINC00476-203ENST00000427259 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
LINC00476-203ENST00000427259 KLHL34Q8N239 644 aa17.93■□□□□ 0.46
LINC00476-203ENST00000427259 NLGN2Q8NFZ4 835 aa17.93■□□□□ 0.46
LINC00476-203ENST00000427259 GOLGB1Q14789 3259 aaKnown RBP17.92■□□□□ 0.46
LINC00476-203ENST00000427259 TJP1Q07157 1748 aa17.92■□□□□ 0.46
LINC00476-203ENST00000427259 PHF14O94880 888 aa17.92■□□□□ 0.46
LINC00476-203ENST00000427259 YY1P25490 414 aa17.92■□□□□ 0.46
LINC00476-203ENST00000427259 CHD4Q14839 1912 aa17.92■□□□□ 0.46
LINC00476-203ENST00000427259 HMOX1P09601 288 aa17.91■□□□□ 0.46
LINC00476-203ENST00000427259 POLD1P28340 1107 aa17.91■□□□□ 0.46
LINC00476-203ENST00000427259 DCAF5Q96JK2 942 aa17.91■□□□□ 0.46
LINC00476-203ENST00000427259 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
LINC00476-203ENST00000427259 C4AP0C0L4 1744 aa17.9■□□□□ 0.46
LINC00476-203ENST00000427259 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
LINC00476-203ENST00000427259 ATP6V1AP38606 617 aa17.9■□□□□ 0.46
LINC00476-203ENST00000427259 AMOTQ4VCS5 1084 aa17.9■□□□□ 0.46
LINC00476-203ENST00000427259 AK7Q96M32 723 aa17.9■□□□□ 0.46
LINC00476-203ENST00000427259 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
LINC00476-203ENST00000427259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.89■□□□□ 0.45
LINC00476-203ENST00000427259 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
LINC00476-203ENST00000427259 GNPATO15228 680 aa17.87■□□□□ 0.45
LINC00476-203ENST00000427259 CABP4P57796 275 aa17.87■□□□□ 0.45
LINC00476-203ENST00000427259 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
LINC00476-203ENST00000427259 MRC1P22897 1456 aa17.87■□□□□ 0.45
LINC00476-203ENST00000427259 HSP90AB1P08238 724 aaKnown RBP17.86■□□□□ 0.45
LINC00476-203ENST00000427259 C1orf141Q5JVX7 400 aa17.86■□□□□ 0.45
LINC00476-203ENST00000427259 NFATC2IPQ8NCF5 419 aa17.86■□□□□ 0.45
LINC00476-203ENST00000427259 LGR6Q9HBX8 967 aa17.86■□□□□ 0.45
LINC00476-203ENST00000427259 DIAPH1O60610 1272 aaKnown RBP17.85■□□□□ 0.45
LINC00476-203ENST00000427259 SSFA2P28290 1259 aa17.84■□□□□ 0.45
LINC00476-203ENST00000427259 MTHFSDQ2M296 383 aaKnown RBP17.84■□□□□ 0.45
LINC00476-203ENST00000427259 FLAD1Q8NFF5 587 aa17.84■□□□□ 0.45
LINC00476-203ENST00000427259 KIAA1551Q9HCM1 1747 aa17.84■□□□□ 0.45
LINC00476-203ENST00000427259 PTCD1O75127 700 aaKnown RBP17.83■□□□□ 0.44
LINC00476-203ENST00000427259 SIPA1L3O60292 1781 aaPredicted RBP17.83■□□□□ 0.44
LINC00476-203ENST00000427259 UBR2Q8IWV8 1755 aa17.83■□□□□ 0.44
LINC00476-203ENST00000427259 YBX3P16989 372 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC00476-203ENST00000427259 AKAP4Q5JQC9 854 aa17.82■□□□□ 0.44
LINC00476-203ENST00000427259 KCPQ6ZWJ8 1503 aa17.82■□□□□ 0.44
LINC00476-203ENST00000427259 GPR162Q16538 588 aa17.81■□□□□ 0.44
LINC00476-203ENST00000427259 PELP1Q8IZL8 1130 aaKnown RBP17.81■□□□□ 0.44
LINC00476-203ENST00000427259 KIF13BQ9NQT8 1826 aa17.81■□□□□ 0.44
LINC00476-203ENST00000427259 CNTNAP4Q9C0A0 1308 aa17.8■□□□□ 0.44
LINC00476-203ENST00000427259 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
LINC00476-203ENST00000427259 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
LINC00476-203ENST00000427259 U2SURPO15042 1029 aaKnown RBP17.79■□□□□ 0.44
LINC00476-203ENST00000427259 SLC39A6Q13433 755 aa17.79■□□□□ 0.44
LINC00476-203ENST00000427259 SLC52A2Q9HAB3 445 aa17.79■□□□□ 0.44
LINC00476-203ENST00000427259 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
LINC00476-203ENST00000427259 WWC3Q9ULE0 1092 aa17.78■□□□□ 0.44
LINC00476-203ENST00000427259 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
LINC00476-203ENST00000427259 RTCBQ9Y3I0 505 aaKnown RBP17.77■□□□□ 0.44
LINC00476-203ENST00000427259 RPS6KA4O75676 772 aa17.76■□□□□ 0.43
LINC00476-203ENST00000427259 HMGB2P26583 209 aaKnown RBP17.76■□□□□ 0.43
LINC00476-203ENST00000427259 CRKLP46109 303 aaKnown RBP17.76■□□□□ 0.43
LINC00476-203ENST00000427259 RC3H1Q5TC82 1133 aaKnown RBP17.76■□□□□ 0.43
LINC00476-203ENST00000427259 DNAJC10Q8IXB1 793 aa17.76■□□□□ 0.43
LINC00476-203ENST00000427259 ZNF784Q8NCA9 323 aaPredicted RBP17.76■□□□□ 0.43
LINC00476-203ENST00000427259 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
LINC00476-203ENST00000427259 MMP10P09238 476 aa17.75■□□□□ 0.43
LINC00476-203ENST00000427259 TRAPPC3LQ5T215 181 aa17.75■□□□□ 0.43
LINC00476-203ENST00000427259 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
LINC00476-203ENST00000427259 PHACTR3Q96KR7 559 aa17.75■□□□□ 0.43
LINC00476-203ENST00000427259 GYS1P13807 737 aa17.74■□□□□ 0.43
LINC00476-203ENST00000427259 IL17REQ8NFR9 667 aa17.74■□□□□ 0.43
LINC00476-203ENST00000427259 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
LINC00476-203ENST00000427259 SRP68Q9UHB9 627 aaKnown RBP17.74■□□□□ 0.43
LINC00476-203ENST00000427259 BRCA1P38398 1863 aaKnown RBP17.73■□□□□ 0.43
LINC00476-203ENST00000427259 PXDNLA1KZ92 1463 aa17.72■□□□□ 0.43
LINC00476-203ENST00000427259 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
LINC00476-203ENST00000427259 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
LINC00476-203ENST00000427259 C10orf71Q711Q0 1435 aa17.71■□□□□ 0.43
LINC00476-203ENST00000427259 CYP19A1P11511 503 aaPredicted RBP17.7■□□□□ 0.42
LINC00476-203ENST00000427259 RFC4P35249 363 aa17.7■□□□□ 0.42
LINC00476-203ENST00000427259 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
LINC00476-203ENST00000427259 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
LINC00476-203ENST00000427259 FKBP8Q14318 412 aa17.69■□□□□ 0.42
LINC00476-203ENST00000427259 SOS1Q07889 1333 aaPredicted RBP17.69■□□□□ 0.42
LINC00476-203ENST00000427259 CEMIPQ8WUJ3 1361 aa17.68■□□□□ 0.42
LINC00476-203ENST00000427259 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
LINC00476-203ENST00000427259 DDR1Q08345 913 aa17.68■□□□□ 0.42
LINC00476-203ENST00000427259 CFAP53Q96M91 514 aa17.68■□□□□ 0.42
LINC00476-203ENST00000427259 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
LINC00476-203ENST00000427259 ZBTB1Q9Y2K1 713 aa17.68■□□□□ 0.42
LINC00476-203ENST00000427259 KCNQ3O43525 872 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms