RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 KIF24Q5T7B8 1368 aa12.09□□□□□ -0.47
VNN3-208ENST00000427187 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
VNN3-208ENST00000427187 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
VNN3-208ENST00000427187 PHKG2P15735 406 aa12.08□□□□□ -0.48
VNN3-208ENST00000427187 ARHGAP27Q6ZUM4 889 aa12.08□□□□□ -0.48
VNN3-208ENST00000427187 NMRK2Q9NPI5 230 aa12.08□□□□□ -0.48
VNN3-208ENST00000427187 SLC24A1O60721 1099 aa12.07□□□□□ -0.48
VNN3-208ENST00000427187 DPEP1P16444 411 aa12.07□□□□□ -0.48
VNN3-208ENST00000427187 APLP1P51693 650 aa12.07□□□□□ -0.48
VNN3-208ENST00000427187 HTRA3P83110 453 aa12.07□□□□□ -0.48
VNN3-208ENST00000427187 C10orf71Q711Q0 1435 aa12.07□□□□□ -0.48
VNN3-208ENST00000427187 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
VNN3-208ENST00000427187 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
VNN3-208ENST00000427187 KDRP35968 1356 aa12.06□□□□□ -0.48
VNN3-208ENST00000427187 C4AP0C0L4 1744 aa12.06□□□□□ -0.48
VNN3-208ENST00000427187 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
VNN3-208ENST00000427187 TRAPPC3LQ5T215 181 aa12.06□□□□□ -0.48
VNN3-208ENST00000427187 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
VNN3-208ENST00000427187 RTCBQ9Y3I0 505 aaKnown RBP12.06□□□□□ -0.48
VNN3-208ENST00000427187 WASHC2AQ641Q2 1341 aa12.06□□□□□ -0.48
VNN3-208ENST00000427187 BRCA1P38398 1863 aaKnown RBP12.06□□□□□ -0.48
VNN3-208ENST00000427187 TOMM70O94826 608 aa12.05□□□□□ -0.48
VNN3-208ENST00000427187 FCHSD2O94868 740 aa12.05□□□□□ -0.48
VNN3-208ENST00000427187 DNAJC5GQ8N7S2 189 aa12.05□□□□□ -0.48
VNN3-208ENST00000427187 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
VNN3-208ENST00000427187 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
VNN3-208ENST00000427187 WDR90Q96KV7 1748 aa12.05□□□□□ -0.48
VNN3-208ENST00000427187 GYS1P13807 737 aa12.04□□□□□ -0.48
VNN3-208ENST00000427187 TGFB2P61812 414 aa12.04□□□□□ -0.48
VNN3-208ENST00000427187 EIF4A2Q14240 407 aaKnown RBP12.04□□□□□ -0.48
VNN3-208ENST00000427187 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
VNN3-208ENST00000427187 MYH14Q7Z406 1995 aaKnown RBP12.04□□□□□ -0.48
VNN3-208ENST00000427187 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
VNN3-208ENST00000427187 NLGN1Q8N2Q7 840 aa12.03□□□□□ -0.48
VNN3-208ENST00000427187 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
VNN3-208ENST00000427187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.03□□□□□ -0.48
VNN3-208ENST00000427187 PCNTO95613 3336 aa12.03□□□□□ -0.48
VNN3-208ENST00000427187 KCPQ6ZWJ8 1503 aa12.02□□□□□ -0.48
VNN3-208ENST00000427187 RFC4P35249 363 aa12.02□□□□□ -0.49
VNN3-208ENST00000427187 CDCA8Q53HL2 280 aa12.02□□□□□ -0.49
VNN3-208ENST00000427187 POLR3GLQ9BT43 218 aa12.02□□□□□ -0.49
VNN3-208ENST00000427187 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
VNN3-208ENST00000427187 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
VNN3-208ENST00000427187 ARFGEF1Q9Y6D6 1849 aa12.02□□□□□ -0.49
VNN3-208ENST00000427187 KCNA3P22001 575 aa12.01□□□□□ -0.49
VNN3-208ENST00000427187 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
VNN3-208ENST00000427187 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
VNN3-208ENST00000427187 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
VNN3-208ENST00000427187 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
VNN3-208ENST00000427187 RPS6KA4O75676 772 aa12□□□□□ -0.49
VNN3-208ENST00000427187 CHRNA5P30532 468 aa12□□□□□ -0.49
VNN3-208ENST00000427187 C16orf71Q8IYS4 520 aaPredicted RBP12□□□□□ -0.49
VNN3-208ENST00000427187 RNF181Q9P0P0 153 aa12□□□□□ -0.49
VNN3-208ENST00000427187 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
VNN3-208ENST00000427187 CAPN15O75808 1086 aa11.99□□□□□ -0.49
VNN3-208ENST00000427187 ADRA2BP18089 450 aa11.99□□□□□ -0.49
VNN3-208ENST00000427187 CABP4P57796 275 aa11.99□□□□□ -0.49
VNN3-208ENST00000427187 DDR1Q08345 913 aa11.99□□□□□ -0.49
VNN3-208ENST00000427187 FKBP8Q14318 412 aa11.99□□□□□ -0.49
VNN3-208ENST00000427187 COL13A1Q5TAT6 717 aaPredicted RBP11.99□□□□□ -0.49
VNN3-208ENST00000427187 RC3H1Q5TC82 1133 aaKnown RBP11.99□□□□□ -0.49
VNN3-208ENST00000427187 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
VNN3-208ENST00000427187 TJP1Q07157 1748 aa11.98□□□□□ -0.49
VNN3-208ENST00000427187 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
VNN3-208ENST00000427187 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
VNN3-208ENST00000427187 AEBP1Q8IUX7 1158 aa11.98□□□□□ -0.49
VNN3-208ENST00000427187 DCAF5Q96JK2 942 aa11.98□□□□□ -0.49
VNN3-208ENST00000427187 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
VNN3-208ENST00000427187 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
VNN3-208ENST00000427187 SBF1O95248 1867 aa11.97□□□□□ -0.49
VNN3-208ENST00000427187 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
VNN3-208ENST00000427187 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
VNN3-208ENST00000427187 KLRG1Q96E93 195 aa11.97□□□□□ -0.49
VNN3-208ENST00000427187 USP42Q9H9J4 1324 aaKnown RBP11.96□□□□□ -0.49
VNN3-208ENST00000427187 HSP90AB1P08238 724 aaKnown RBP11.96□□□□□ -0.49
VNN3-208ENST00000427187 MTHFSP49914 203 aa11.96□□□□□ -0.49
VNN3-208ENST00000427187 RASSF7Q02833 373 aa11.96□□□□□ -0.49
VNN3-208ENST00000427187 PLEKHO1Q53GL0 409 aaPredicted RBP11.96□□□□□ -0.49
VNN3-208ENST00000427187 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.49
VNN3-208ENST00000427187 KDM2BQ8NHM5 1336 aa11.95□□□□□ -0.5
VNN3-208ENST00000427187 TNRC6CQ9HCJ0 1690 aaKnown RBP11.95□□□□□ -0.5
VNN3-208ENST00000427187 ADAMTS7Q9UKP4 1686 aa11.95□□□□□ -0.5
VNN3-208ENST00000427187 POLRMTO00411 1230 aaKnown RBP11.94□□□□□ -0.5
VNN3-208ENST00000427187 FSTL1Q12841 308 aa11.94□□□□□ -0.5
VNN3-208ENST00000427187 C1orf141Q5JVX7 400 aa11.94□□□□□ -0.5
VNN3-208ENST00000427187 USPL1Q5W0Q7 1092 aa11.94□□□□□ -0.5
VNN3-208ENST00000427187 INTS5Q6P9B9 1019 aaKnown RBP11.94□□□□□ -0.5
VNN3-208ENST00000427187 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
VNN3-208ENST00000427187 PRELPP51888 382 aa11.93□□□□□ -0.5
VNN3-208ENST00000427187 JMYQ8N9B5 988 aa11.93□□□□□ -0.5
VNN3-208ENST00000427187 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
VNN3-208ENST00000427187 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
VNN3-208ENST00000427187 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
VNN3-208ENST00000427187 DNAJC10Q8IXB1 793 aa11.92□□□□□ -0.5
VNN3-208ENST00000427187 CCDC88AQ3V6T2 1871 aa11.91□□□□□ -0.5
VNN3-208ENST00000427187 TM4SF1P30408 202 aa11.91□□□□□ -0.5
VNN3-208ENST00000427187 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
VNN3-208ENST00000427187 SMC1BQ8NDV3 1235 aa11.91□□□□□ -0.5
VNN3-208ENST00000427187 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
VNN3-208ENST00000427187 ZPR1O75312 459 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms