RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 LINC00116Q8NCU8 138 aa30.67■■■□□ 2.5
SEMA3C-204ENST00000427167 ITPK1Q13572 414 aa30.65■■■□□ 2.5
SEMA3C-204ENST00000427167 RBM42Q9BTD8 480 aaKnown RBP30.65■■■□□ 2.5
SEMA3C-204ENST00000427167 PHF14O94880 888 aa30.64■■■□□ 2.5
SEMA3C-204ENST00000427167 AKAP4Q5JQC9 854 aa30.64■■■□□ 2.5
SEMA3C-204ENST00000427167 KLHL34Q8N239 644 aa30.64■■■□□ 2.5
SEMA3C-204ENST00000427167 SYT17Q9BSW7 474 aa30.64■■■□□ 2.5
SEMA3C-204ENST00000427167 DCAF8L1A6NGE4 600 aa30.63■■■□□ 2.49
SEMA3C-204ENST00000427167 MSL1Q68DK7 614 aa30.63■■■□□ 2.49
SEMA3C-204ENST00000427167 SMIM5Q71RC9 77 aa30.63■■■□□ 2.49
SEMA3C-204ENST00000427167 AMIGO3Q86WK7 504 aa30.62■■■□□ 2.49
SEMA3C-204ENST00000427167 NFATC2IPQ8NCF5 419 aa30.62■■■□□ 2.49
SEMA3C-204ENST00000427167 FLAD1Q8NFF5 587 aa30.62■■■□□ 2.49
SEMA3C-204ENST00000427167 CFAP53Q96M91 514 aa30.62■■■□□ 2.49
SEMA3C-204ENST00000427167 COL24A1Q17RW2 1714 aa30.61■■■□□ 2.49
SEMA3C-204ENST00000427167 SCN11AQ9UI33 1791 aa30.61■■■□□ 2.49
SEMA3C-204ENST00000427167 MTHFSDQ2M296 383 aaKnown RBP30.6■■■□□ 2.49
SEMA3C-204ENST00000427167 UBR3Q6ZT12 1888 aa30.6■■■□□ 2.49
SEMA3C-204ENST00000427167 PPP2R1AP30153 589 aa30.59■■■□□ 2.49
SEMA3C-204ENST00000427167 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.58■■■□□ 2.49
SEMA3C-204ENST00000427167 GNPATO15228 680 aa30.58■■■□□ 2.49
SEMA3C-204ENST00000427167 SLC4A9Q96Q91 983 aa30.58■■■□□ 2.49
SEMA3C-204ENST00000427167 LGR6Q9HBX8 967 aa30.58■■■□□ 2.49
SEMA3C-204ENST00000427167 PTCD1O75127 700 aaKnown RBP30.57■■■□□ 2.48
SEMA3C-204ENST00000427167 RNMTO43148 476 aaKnown RBP30.54■■■□□ 2.48
SEMA3C-204ENST00000427167 SSFA2P28290 1259 aa30.54■■■□□ 2.48
SEMA3C-204ENST00000427167 SLC52A2Q9HAB3 445 aa30.54■■■□□ 2.48
SEMA3C-204ENST00000427167 MAP3K5Q99683 1374 aa30.54■■■□□ 2.48
SEMA3C-204ENST00000427167 VIRMAQ69YN4 1812 aaKnown RBP30.53■■■□□ 2.48
SEMA3C-204ENST00000427167 ZNF831Q5JPB2 1677 aa30.52■■■□□ 2.48
SEMA3C-204ENST00000427167 NUDCQ9Y266 331 aa30.52■■■□□ 2.48
SEMA3C-204ENST00000427167 COL5A3P25940 1745 aaPredicted RBP30.5■■■□□ 2.47
SEMA3C-204ENST00000427167 MRC1P22897 1456 aa30.5■■■□□ 2.47
SEMA3C-204ENST00000427167 PRKAR2BP31323 418 aa30.49■■■□□ 2.47
SEMA3C-204ENST00000427167 GAS2L2Q8NHY3 880 aa30.48■■■□□ 2.47
SEMA3C-204ENST00000427167 RTCBQ9Y3I0 505 aaKnown RBP30.48■■■□□ 2.47
SEMA3C-204ENST00000427167 U2AF1L5P0DN76 240 aaPredicted RBP30.47■■■□□ 2.47
SEMA3C-204ENST00000427167 U2AF1Q01081 240 aaKnown RBP eCLIP30.47■■■□□ 2.47
SEMA3C-204ENST00000427167 SLC39A6Q13433 755 aa30.46■■■□□ 2.47
SEMA3C-204ENST00000427167 RSPH6AQ9H0K4 717 aa30.46■■■□□ 2.47
SEMA3C-204ENST00000427167 CNTNAP4Q9C0A0 1308 aa30.46■■■□□ 2.47
SEMA3C-204ENST00000427167 ADAMTS7Q9UKP4 1686 aa30.46■■■□□ 2.47
SEMA3C-204ENST00000427167 NLGN2Q8NFZ4 835 aa30.45■■■□□ 2.47
SEMA3C-204ENST00000427167 GNAT3A8MTJ3 354 aa30.44■■■□□ 2.46
SEMA3C-204ENST00000427167 TRAPPC3LQ5T215 181 aa30.44■■■□□ 2.46
SEMA3C-204ENST00000427167 RC3H1Q5TC82 1133 aaKnown RBP30.44■■■□□ 2.46
SEMA3C-204ENST00000427167 PHACTR3Q96KR7 559 aa30.44■■■□□ 2.46
SEMA3C-204ENST00000427167 TJP1Q07157 1748 aa30.44■■■□□ 2.46
SEMA3C-204ENST00000427167 YY1P25490 414 aa30.43■■■□□ 2.46
SEMA3C-204ENST00000427167 CRKLP46109 303 aaKnown RBP30.42■■■□□ 2.46
SEMA3C-204ENST00000427167 PELP1Q8IZL8 1130 aaKnown RBP30.42■■■□□ 2.46
SEMA3C-204ENST00000427167 RPS6KA4O75676 772 aa30.41■■■□□ 2.46
SEMA3C-204ENST00000427167 MYH14Q7Z406 1995 aaKnown RBP30.41■■■□□ 2.46
SEMA3C-204ENST00000427167 GPR162Q16538 588 aa30.4■■■□□ 2.46
SEMA3C-204ENST00000427167 TEFQ10587 303 aa30.39■■■□□ 2.46
SEMA3C-204ENST00000427167 DDX10Q13206 875 aaKnown RBP30.39■■■□□ 2.46
SEMA3C-204ENST00000427167 DNAJC10Q8IXB1 793 aa30.39■■■□□ 2.46
SEMA3C-204ENST00000427167 IL17REQ8NFR9 667 aa30.39■■■□□ 2.46
SEMA3C-204ENST00000427167 ARHGEF1Q92888 912 aaKnown RBP30.39■■■□□ 2.46
SEMA3C-204ENST00000427167 KCPQ6ZWJ8 1503 aa30.38■■■□□ 2.45
SEMA3C-204ENST00000427167 CICQ96RK0 1608 aaPredicted RBP30.38■■■□□ 2.45
SEMA3C-204ENST00000427167 ADRA2BP18089 450 aa30.37■■■□□ 2.45
SEMA3C-204ENST00000427167 RFC4P35249 363 aa30.37■■■□□ 2.45
SEMA3C-204ENST00000427167 UTRNP46939 3433 aa30.37■■■□□ 2.45
SEMA3C-204ENST00000427167 FCHSD2O94868 740 aa30.36■■■□□ 2.45
SEMA3C-204ENST00000427167 TTC5Q8N0Z6 440 aa30.36■■■□□ 2.45
SEMA3C-204ENST00000427167 C4AP0C0L4 1744 aa30.34■■■□□ 2.45
SEMA3C-204ENST00000427167 CD2APQ9Y5K6 639 aa30.34■■■□□ 2.45
SEMA3C-204ENST00000427167 MMP10P09238 476 aa30.33■■■□□ 2.45
SEMA3C-204ENST00000427167 INTS5Q6P9B9 1019 aaKnown RBP30.33■■■□□ 2.45
SEMA3C-204ENST00000427167 CCDC87Q9NVE4 849 aa30.32■■■□□ 2.44
SEMA3C-204ENST00000427167 UBR2Q8IWV8 1755 aa30.31■■■□□ 2.44
SEMA3C-204ENST00000427167 SIPA1L3O60292 1781 aaPredicted RBP30.31■■■□□ 2.44
SEMA3C-204ENST00000427167 CEMIPQ8WUJ3 1361 aa30.3■■■□□ 2.44
SEMA3C-204ENST00000427167 CYP19A1P11511 503 aaPredicted RBP30.3■■■□□ 2.44
SEMA3C-204ENST00000427167 GYS1P13807 737 aa30.3■■■□□ 2.44
SEMA3C-204ENST00000427167 NLGN1Q8N2Q7 840 aa30.3■■■□□ 2.44
SEMA3C-204ENST00000427167 RTF1Q92541 710 aaKnown RBP30.3■■■□□ 2.44
SEMA3C-204ENST00000427167 SRP68Q9UHB9 627 aaKnown RBP30.29■■■□□ 2.44
SEMA3C-204ENST00000427167 GOLGB1Q14789 3259 aaKnown RBP30.28■■■□□ 2.44
SEMA3C-204ENST00000427167 ZNF790Q6PG37 636 aa30.28■■■□□ 2.44
SEMA3C-204ENST00000427167 VSIG10Q8N0Z9 540 aa30.28■■■□□ 2.44
SEMA3C-204ENST00000427167 RALBP1Q15311 655 aa30.27■■■□□ 2.44
SEMA3C-204ENST00000427167 MCM10Q7L590 875 aa30.27■■■□□ 2.44
SEMA3C-204ENST00000427167 NEFMP07197 916 aa30.26■■■□□ 2.43
SEMA3C-204ENST00000427167 ZNF496Q96IT1 587 aaPredicted RBP30.26■■■□□ 2.43
SEMA3C-204ENST00000427167 USP42Q9H9J4 1324 aaKnown RBP30.25■■■□□ 2.43
SEMA3C-204ENST00000427167 BTBD11A6QL63 1104 aa30.25■■■□□ 2.43
SEMA3C-204ENST00000427167 YBX3P16989 372 aaKnown RBP eCLIP30.25■■■□□ 2.43
SEMA3C-204ENST00000427167 ZBTB1Q9Y2K1 713 aa30.25■■■□□ 2.43
SEMA3C-204ENST00000427167 SOS1Q07889 1333 aaPredicted RBP30.24■■■□□ 2.43
SEMA3C-204ENST00000427167 DCTN1Q14203 1278 aa30.24■■■□□ 2.43
SEMA3C-204ENST00000427167 WWC3Q9ULE0 1092 aa30.24■■■□□ 2.43
SEMA3C-204ENST00000427167 HEG1Q9ULI3 1381 aa30.23■■■□□ 2.43
SEMA3C-204ENST00000427167 CHD4Q14839 1912 aa30.22■■■□□ 2.43
SEMA3C-204ENST00000427167 PARP3Q9Y6F1 533 aa30.22■■■□□ 2.43
SEMA3C-204ENST00000427167 COL15A1P39059 1388 aa30.21■■■□□ 2.43
SEMA3C-204ENST00000427167 KCNQ3O43525 872 aa30.21■■■□□ 2.43
SEMA3C-204ENST00000427167 STARD3NLO95772 234 aa30.21■■■□□ 2.43
SEMA3C-204ENST00000427167 CANXP27824 592 aaKnown RBP30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms