RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 RBM19Q9Y4C8 960 aaKnown RBP11.35□□□□□ -0.59
LINC01953-201ENST00000426870 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
LINC01953-201ENST00000426870 BACH1O14867 736 aa11.34□□□□□ -0.59
LINC01953-201ENST00000426870 RIPOR1Q6ZS17 1223 aa11.34□□□□□ -0.59
LINC01953-201ENST00000426870 GAS2L1Q99501 681 aaPredicted RBP11.34□□□□□ -0.59
LINC01953-201ENST00000426870 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
LINC01953-201ENST00000426870 H7C1W4 665 aa11.33□□□□□ -0.6
LINC01953-201ENST00000426870 PCDHGA11Q9Y5H2 935 aa11.33□□□□□ -0.6
LINC01953-201ENST00000426870 HRH3Q9Y5N1 445 aa11.33□□□□□ -0.6
LINC01953-201ENST00000426870 STAU1O95793 577 aaKnown RBP11.32□□□□□ -0.6
LINC01953-201ENST00000426870 SCNN1DP51172 638 aa11.32□□□□□ -0.6
LINC01953-201ENST00000426870 VWA5B2Q8N398 1253 aa11.32□□□□□ -0.6
LINC01953-201ENST00000426870 RHBDD1Q8TEB9 315 aa11.32□□□□□ -0.6
LINC01953-201ENST00000426870 NANOS1Q8WY41 292 aaKnown RBP11.32□□□□□ -0.6
LINC01953-201ENST00000426870 GMCL1Q96IK5 515 aa11.32□□□□□ -0.6
LINC01953-201ENST00000426870 TFIP11Q9UBB9 837 aaKnown RBP11.32□□□□□ -0.6
LINC01953-201ENST00000426870 SERTAD1Q9UHV2 236 aa11.32□□□□□ -0.6
LINC01953-201ENST00000426870 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
LINC01953-201ENST00000426870 SMTNP53814 917 aa11.31□□□□□ -0.6
LINC01953-201ENST00000426870 FOXR1Q6PIV2 292 aa11.31□□□□□ -0.6
LINC01953-201ENST00000426870 FHDC1Q9C0D6 1143 aaPredicted RBP11.31□□□□□ -0.6
LINC01953-201ENST00000426870 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
LINC01953-201ENST00000426870 PHKA2P46019 1235 aa11.3□□□□□ -0.6
LINC01953-201ENST00000426870 PPARGC1BQ86YN6 1023 aaKnown RBP11.3□□□□□ -0.6
LINC01953-201ENST00000426870 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
LINC01953-201ENST00000426870 A0A1B0GTH6 734 aa11.29□□□□□ -0.6
LINC01953-201ENST00000426870 PALM3A6NDB9 673 aaPredicted RBP11.29□□□□□ -0.6
LINC01953-201ENST00000426870 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
LINC01953-201ENST00000426870 DNAAF2Q9NVR5 837 aaKnown RBP11.29□□□□□ -0.6
LINC01953-201ENST00000426870 TMEM229AB2RXF0 380 aa11.28□□□□□ -0.6
LINC01953-201ENST00000426870 F11P03951 625 aa11.28□□□□□ -0.6
LINC01953-201ENST00000426870 LCE2CQ5TA81 110 aa11.28□□□□□ -0.6
LINC01953-201ENST00000426870 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
LINC01953-201ENST00000426870 NIFKQ9BYG3 293 aaKnown RBP11.28□□□□□ -0.6
LINC01953-201ENST00000426870 A6NJY4 79 aa11.27□□□□□ -0.61
LINC01953-201ENST00000426870 CSB-PGBD3P0DP91 1061 aa11.27□□□□□ -0.61
LINC01953-201ENST00000426870 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
LINC01953-201ENST00000426870 TRIM22Q8IYM9 498 aa11.27□□□□□ -0.61
LINC01953-201ENST00000426870 PGBD3Q8N328 593 aa11.27□□□□□ -0.61
LINC01953-201ENST00000426870 OGFOD1Q8N543 542 aa11.27□□□□□ -0.61
LINC01953-201ENST00000426870 TPCN2Q8NHX9 752 aa11.27□□□□□ -0.61
LINC01953-201ENST00000426870 MAFBQ9Y5Q3 323 aaPredicted RBP11.27□□□□□ -0.61
LINC01953-201ENST00000426870 CCDC102BQ68D86 513 aa11.26□□□□□ -0.61
LINC01953-201ENST00000426870 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
LINC01953-201ENST00000426870 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC01953-201ENST00000426870 CDK2AP1O14519 115 aa11.25□□□□□ -0.61
LINC01953-201ENST00000426870 RASA1P20936 1047 aa11.25□□□□□ -0.61
LINC01953-201ENST00000426870 PLA2G4AP47712 749 aa11.25□□□□□ -0.61
LINC01953-201ENST00000426870 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
LINC01953-201ENST00000426870 ZNF358Q9NW07 568 aa11.25□□□□□ -0.61
LINC01953-201ENST00000426870 LMOD1P29536 600 aaPredicted RBP11.24□□□□□ -0.61
LINC01953-201ENST00000426870 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
LINC01953-201ENST00000426870 GPAMQ9HCL2 828 aa11.24□□□□□ -0.61
LINC01953-201ENST00000426870 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
LINC01953-201ENST00000426870 MTFR1Q15390 333 aa11.23□□□□□ -0.61
LINC01953-201ENST00000426870 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
LINC01953-201ENST00000426870 AIDAQ96BJ3 306 aa11.23□□□□□ -0.61
LINC01953-201ENST00000426870 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
LINC01953-201ENST00000426870 COL25A1Q9BXS0 654 aaPredicted RBP11.23□□□□□ -0.61
LINC01953-201ENST00000426870 NUCKS1Q9H1E3 243 aaKnown RBP11.23□□□□□ -0.61
LINC01953-201ENST00000426870 CABP1Q9NZU7 370 aa11.23□□□□□ -0.61
LINC01953-201ENST00000426870 CLDN10P78369 228 aa11.22□□□□□ -0.61
LINC01953-201ENST00000426870 NBPF1Q3BBV0 1214 aa11.22□□□□□ -0.61
LINC01953-201ENST00000426870 EFHC2Q5JST6 749 aa11.22□□□□□ -0.61
LINC01953-201ENST00000426870 ZNF837Q96EG3 531 aaPredicted RBP11.22□□□□□ -0.61
LINC01953-201ENST00000426870 CNTNAP3BQ96NU0 1288 aa11.22□□□□□ -0.61
LINC01953-201ENST00000426870 CNTNAP3Q9BZ76 1288 aa11.22□□□□□ -0.61
LINC01953-201ENST00000426870 VRTNQ9H8Y1 702 aa11.22□□□□□ -0.61
LINC01953-201ENST00000426870 CUEDC1Q9NWM3 386 aaPredicted RBP11.22□□□□□ -0.61
LINC01953-201ENST00000426870 ZBTB7BO15156 539 aaPredicted RBP11.21□□□□□ -0.61
LINC01953-201ENST00000426870 DBN1Q16643 649 aa11.21□□□□□ -0.61
LINC01953-201ENST00000426870 ZSCAN1Q8NBB4 408 aa11.21□□□□□ -0.61
LINC01953-201ENST00000426870 C1orf216Q8TAB5 229 aa11.21□□□□□ -0.61
LINC01953-201ENST00000426870 CHMP3Q9Y3E7 222 aa11.21□□□□□ -0.61
LINC01953-201ENST00000426870 TATP17735 454 aaPredicted RBP11.2□□□□□ -0.62
LINC01953-201ENST00000426870 MSX1P28360 303 aa11.2□□□□□ -0.62
LINC01953-201ENST00000426870 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
LINC01953-201ENST00000426870 KIAA1024Q9UPX6 916 aa11.2□□□□□ -0.62
LINC01953-201ENST00000426870 SIX5Q8N196 739 aa11.19□□□□□ -0.62
LINC01953-201ENST00000426870 GTPBP3Q969Y2 492 aaKnown RBP11.19□□□□□ -0.62
LINC01953-201ENST00000426870 SCHIP1Q9P0W5 487 aaPredicted RBP11.19□□□□□ -0.62
LINC01953-201ENST00000426870 STK17AQ9UEE5 414 aa11.19□□□□□ -0.62
LINC01953-201ENST00000426870 M0R2N6 131 aa11.18□□□□□ -0.62
LINC01953-201ENST00000426870 TNS4Q8IZW8 715 aa11.18□□□□□ -0.62
LINC01953-201ENST00000426870 PHF24Q9UPV7 400 aa11.18□□□□□ -0.62
LINC01953-201ENST00000426870 SEC13P55735 322 aa11.17□□□□□ -0.62
LINC01953-201ENST00000426870 C14orf37Q86TY3 774 aa11.17□□□□□ -0.62
LINC01953-201ENST00000426870 RUBCNLQ9H714 662 aa11.17□□□□□ -0.62
LINC01953-201ENST00000426870 IQSEC3Q9UPP2 1182 aaPredicted RBP11.17□□□□□ -0.62
LINC01953-201ENST00000426870 ARSJQ5FYB0 599 aaPredicted RBP11.16□□□□□ -0.62
LINC01953-201ENST00000426870 SLC9A9Q8IVB4 645 aa11.16□□□□□ -0.62
LINC01953-201ENST00000426870 CCDC97Q96F63 343 aaPredicted RBP11.16□□□□□ -0.62
LINC01953-201ENST00000426870 ZNF232Q9UNY5 417 aa11.16□□□□□ -0.62
LINC01953-201ENST00000426870 NSFL1CQ9UNZ2 370 aaKnown RBP11.16□□□□□ -0.62
LINC01953-201ENST00000426870 GPR25O00155 361 aa11.15□□□□□ -0.62
LINC01953-201ENST00000426870 KANK4Q5T7N3 995 aaPredicted RBP11.15□□□□□ -0.62
LINC01953-201ENST00000426870 ZDHHC3Q9NYG2 299 aa11.15□□□□□ -0.62
LINC01953-201ENST00000426870 GJA3Q9Y6H8 435 aa11.15□□□□□ -0.62
LINC01953-201ENST00000426870 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
LINC01953-201ENST00000426870 SFI1A8K8P3 1242 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms