RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 NWD2Q9ULI1 1742 aa10.08□□□□□ -0.8
LINC01049-201ENST00000426840 ANKRD26Q9UPS8 1709 aa10.08□□□□□ -0.8
LINC01049-201ENST00000426840 MAP2P11137 1827 aaKnown RBP10.08□□□□□ -0.8
LINC01049-201ENST00000426840 AMPHP49418 695 aa10.08□□□□□ -0.8
LINC01049-201ENST00000426840 CNGB1Q14028 1251 aaPredicted RBP10.08□□□□□ -0.8
LINC01049-201ENST00000426840 LARP1Q6PKG0 1096 aaKnown RBP10.08□□□□□ -0.8
LINC01049-201ENST00000426840 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
LINC01049-201ENST00000426840 RGPD5Q99666 1765 aa10.08□□□□□ -0.8
LINC01049-201ENST00000426840 SPATA31A5Q5VU36 1347 aa10.07□□□□□ -0.8
LINC01049-201ENST00000426840 SPATA31A7Q8IWB4 1347 aa10.07□□□□□ -0.8
LINC01049-201ENST00000426840 NUDT7P0C024 238 aa10.07□□□□□ -0.8
LINC01049-201ENST00000426840 RXRBP28702 533 aa10.07□□□□□ -0.8
LINC01049-201ENST00000426840 RBM6P78332 1123 aaKnown RBP10.07□□□□□ -0.8
LINC01049-201ENST00000426840 HSP90AB2PQ58FF8 381 aa10.07□□□□□ -0.8
LINC01049-201ENST00000426840 NRAPQ86VF7 1730 aa10.07□□□□□ -0.8
LINC01049-201ENST00000426840 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.07□□□□□ -0.8
LINC01049-201ENST00000426840 LTN1O94822 1766 aa10.06□□□□□ -0.8
LINC01049-201ENST00000426840 COL5A2P05997 1499 aaPredicted RBP10.06□□□□□ -0.8
LINC01049-201ENST00000426840 KIF24Q5T7B8 1368 aa10.06□□□□□ -0.8
LINC01049-201ENST00000426840 FAM205CA6NFA0 338 aa10.06□□□□□ -0.8
LINC01049-201ENST00000426840 ONECUT3O60422 494 aaPredicted RBP10.06□□□□□ -0.8
LINC01049-201ENST00000426840 SLC34A2O95436 690 aa10.06□□□□□ -0.8
LINC01049-201ENST00000426840 ANKRD24Q8TF21 1146 aa10.06□□□□□ -0.8
LINC01049-201ENST00000426840 WDR70Q9NW82 654 aa10.06□□□□□ -0.8
LINC01049-201ENST00000426840 SPATA31A1Q5TZJ5 1347 aa10.06□□□□□ -0.8
LINC01049-201ENST00000426840 WDR17Q8IZU2 1322 aa10.06□□□□□ -0.8
LINC01049-201ENST00000426840 PEAK1Q9H792 1746 aa10.05□□□□□ -0.8
LINC01049-201ENST00000426840 INSRP06213 1382 aa10.05□□□□□ -0.8
LINC01049-201ENST00000426840 PPM1GO15355 546 aaPredicted RBP10.05□□□□□ -0.8
LINC01049-201ENST00000426840 MTHFSP49914 203 aa10.05□□□□□ -0.8
LINC01049-201ENST00000426840 ILDR2Q71H61 639 aa10.05□□□□□ -0.8
LINC01049-201ENST00000426840 CARD10Q9BWT7 1032 aa10.05□□□□□ -0.8
LINC01049-201ENST00000426840 CCDC9Q9Y3X0 531 aaKnown RBP10.05□□□□□ -0.8
LINC01049-201ENST00000426840 ABCC6O95255 1503 aa10.05□□□□□ -0.8
LINC01049-201ENST00000426840 BLMP54132 1417 aaPredicted RBP10.05□□□□□ -0.8
LINC01049-201ENST00000426840 ERBB3P21860 1342 aa10.05□□□□□ -0.8
LINC01049-201ENST00000426840 RTL1A6NKG5 1358 aa10.04□□□□□ -0.8
LINC01049-201ENST00000426840 FLT4P35916 1363 aa10.04□□□□□ -0.8
LINC01049-201ENST00000426840 CSB-PGBD3P0DP91 1061 aa10.04□□□□□ -0.8
LINC01049-201ENST00000426840 PPP2R1AP30153 589 aa10.04□□□□□ -0.8
LINC01049-201ENST00000426840 TOM1L2Q6ZVM7 507 aa10.04□□□□□ -0.8
LINC01049-201ENST00000426840 PTCD2Q8WV60 388 aaKnown RBP10.04□□□□□ -0.8
LINC01049-201ENST00000426840 LTV1Q96GA3 475 aaPredicted RBP10.04□□□□□ -0.8
LINC01049-201ENST00000426840 GLI3P10071 1580 aa10.04□□□□□ -0.8
LINC01049-201ENST00000426840 CRB1P82279 1406 aa10.03□□□□□ -0.8
LINC01049-201ENST00000426840 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
LINC01049-201ENST00000426840 BARGINQ6ZT62 677 aa10.03□□□□□ -0.8
LINC01049-201ENST00000426840 SMG6Q86US8 1419 aaKnown RBP10.03□□□□□ -0.8
LINC01049-201ENST00000426840 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
LINC01049-201ENST00000426840 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
LINC01049-201ENST00000426840 THRAP3Q9Y2W1 955 aaKnown RBP10.03□□□□□ -0.8
LINC01049-201ENST00000426840 PARD3Q8TEW0 1356 aa10.02□□□□□ -0.8
LINC01049-201ENST00000426840 TBC1D12O60347 775 aa10.02□□□□□ -0.81
LINC01049-201ENST00000426840 EIF4A2Q14240 407 aaKnown RBP10.02□□□□□ -0.81
LINC01049-201ENST00000426840 FAM98CQ17RN3 349 aaKnown RBP10.02□□□□□ -0.81
LINC01049-201ENST00000426840 TCP11L2Q8N4U5 519 aa10.02□□□□□ -0.81
LINC01049-201ENST00000426840 OXER1Q8TDS5 423 aa10.02□□□□□ -0.81
LINC01049-201ENST00000426840 NLRP2Q9NX02 1062 aa10.02□□□□□ -0.81
LINC01049-201ENST00000426840 USP35Q9P2H5 1018 aa10.02□□□□□ -0.81
LINC01049-201ENST00000426840 IL13P35225 146 aa10.01□□□□□ -0.81
LINC01049-201ENST00000426840 RALBP1Q15311 655 aa10.01□□□□□ -0.81
LINC01049-201ENST00000426840 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
LINC01049-201ENST00000426840 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
LINC01049-201ENST00000426840 EYA1Q99502 592 aa10.01□□□□□ -0.81
LINC01049-201ENST00000426840 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
LINC01049-201ENST00000426840 POTEB3A0JP26 581 aa10□□□□□ -0.81
LINC01049-201ENST00000426840 VARS2Q5ST30 1063 aaKnown RBP10□□□□□ -0.81
LINC01049-201ENST00000426840 POTEBQ6S5H4 581 aa10□□□□□ -0.81
LINC01049-201ENST00000426840 PRKRIP1Q9H875 184 aaPredicted RBP10□□□□□ -0.81
LINC01049-201ENST00000426840 RGPD2P0DJD1 1756 aa9.99□□□□□ -0.81
LINC01049-201ENST00000426840 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
LINC01049-201ENST00000426840 USHBP1Q8N6Y0 703 aa9.99□□□□□ -0.81
LINC01049-201ENST00000426840 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
LINC01049-201ENST00000426840 RGS12O14924 1447 aa9.99□□□□□ -0.81
LINC01049-201ENST00000426840 CDCA7Q9BWT1 371 aaPredicted RBP9.98□□□□□ -0.81
LINC01049-201ENST00000426840 DISP2A7MBM2 1401 aa9.98□□□□□ -0.81
LINC01049-201ENST00000426840 DPYSL4O14531 572 aa9.97□□□□□ -0.81
LINC01049-201ENST00000426840 DIAPH1O60610 1272 aaKnown RBP9.97□□□□□ -0.81
LINC01049-201ENST00000426840 IL2RBP14784 551 aa9.97□□□□□ -0.81
LINC01049-201ENST00000426840 CAMK2BQ13554 666 aa9.97□□□□□ -0.81
LINC01049-201ENST00000426840 E2F4Q16254 413 aa9.97□□□□□ -0.81
LINC01049-201ENST00000426840 IGSF1Q8N6C5 1336 aa9.97□□□□□ -0.81
LINC01049-201ENST00000426840 MYBBP1AQ9BQG0 1328 aaKnown RBP9.97□□□□□ -0.81
LINC01049-201ENST00000426840 NCAPD2Q15021 1401 aa9.97□□□□□ -0.81
LINC01049-201ENST00000426840 EXOC5O00471 708 aa9.96□□□□□ -0.82
LINC01049-201ENST00000426840 KRT27Q7Z3Y8 459 aa9.96□□□□□ -0.82
LINC01049-201ENST00000426840 CDAN1Q8IWY9 1227 aa9.96□□□□□ -0.82
LINC01049-201ENST00000426840 CFAP53Q96M91 514 aa9.96□□□□□ -0.82
LINC01049-201ENST00000426840 COL3A1P02461 1466 aaPredicted RBP9.96□□□□□ -0.82
LINC01049-201ENST00000426840 FAM208AQ9UK61 1670 aaKnown RBP9.96□□□□□ -0.82
LINC01049-201ENST00000426840 THSD7AQ9UPZ6 1657 aa9.96□□□□□ -0.82
LINC01049-201ENST00000426840 A0A0G2JS52 829 aa9.95□□□□□ -0.82
LINC01049-201ENST00000426840 EVI5O60447 810 aa9.95□□□□□ -0.82
LINC01049-201ENST00000426840 MYT1Q01538 1121 aa9.95□□□□□ -0.82
LINC01049-201ENST00000426840 DDB1Q16531 1140 aa9.95□□□□□ -0.82
LINC01049-201ENST00000426840 BRWD3Q6RI45 1802 aa9.95□□□□□ -0.82
LINC01049-201ENST00000426840 TATP17735 454 aaPredicted RBP9.94□□□□□ -0.82
LINC01049-201ENST00000426840 FAM182BQ5T319 152 aa9.94□□□□□ -0.82
LINC01049-201ENST00000426840 SULT6B1Q6IMI4 303 aa9.94□□□□□ -0.82
LINC01049-201ENST00000426840 AEBP1Q8IUX7 1158 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms