RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
COPS6-204ENST00000426712 VIRMAQ69YN4 1812 aaKnown RBP12.23□□□□□ -0.45
COPS6-204ENST00000426712 N4BP2Q86UW6 1770 aaPredicted RBP12.23□□□□□ -0.45
COPS6-204ENST00000426712 ADCY9O60503 1353 aa12.23□□□□□ -0.45
COPS6-204ENST00000426712 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
COPS6-204ENST00000426712 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
COPS6-204ENST00000426712 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
COPS6-204ENST00000426712 PHF14O94880 888 aa12.22□□□□□ -0.45
COPS6-204ENST00000426712 SLC4A9Q96Q91 983 aa12.22□□□□□ -0.45
COPS6-204ENST00000426712 ATP10DQ9P241 1426 aa12.21□□□□□ -0.45
COPS6-204ENST00000426712 SCN11AQ9UI33 1791 aa12.21□□□□□ -0.45
COPS6-204ENST00000426712 GNPATO15228 680 aa12.21□□□□□ -0.45
COPS6-204ENST00000426712 DCAF5Q96JK2 942 aa12.21□□□□□ -0.45
COPS6-204ENST00000426712 KDRP35968 1356 aa12.2□□□□□ -0.46
COPS6-204ENST00000426712 HSP90AB1P08238 724 aaKnown RBP12.2□□□□□ -0.46
COPS6-204ENST00000426712 TRAPPC3LQ5T215 181 aa12.2□□□□□ -0.46
COPS6-204ENST00000426712 PANK3Q9H999 370 aa12.2□□□□□ -0.46
COPS6-204ENST00000426712 ARFGEF1Q9Y6D6 1849 aa12.2□□□□□ -0.46
COPS6-204ENST00000426712 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
COPS6-204ENST00000426712 ADRA2BP18089 450 aa12.19□□□□□ -0.46
COPS6-204ENST00000426712 TNNT2P45379 298 aaPredicted RBP12.19□□□□□ -0.46
COPS6-204ENST00000426712 TGFB2P61812 414 aa12.19□□□□□ -0.46
COPS6-204ENST00000426712 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
COPS6-204ENST00000426712 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
COPS6-204ENST00000426712 NLGN1Q8N2Q7 840 aa12.19□□□□□ -0.46
COPS6-204ENST00000426712 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
COPS6-204ENST00000426712 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
COPS6-204ENST00000426712 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
COPS6-204ENST00000426712 RPS6KA4O75676 772 aa12.18□□□□□ -0.46
COPS6-204ENST00000426712 MMP10P09238 476 aa12.18□□□□□ -0.46
COPS6-204ENST00000426712 EIF4G2P78344 907 aaKnown RBP eCLIP12.18□□□□□ -0.46
COPS6-204ENST00000426712 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
COPS6-204ENST00000426712 SBF1O95248 1867 aa12.18□□□□□ -0.46
COPS6-204ENST00000426712 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
COPS6-204ENST00000426712 HSPA5P11021 654 aaKnown RBP12.17□□□□□ -0.46
COPS6-204ENST00000426712 KDM6AO15550 1401 aaPredicted RBP12.17□□□□□ -0.46
COPS6-204ENST00000426712 GYS1P13807 737 aa12.16□□□□□ -0.46
COPS6-204ENST00000426712 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
COPS6-204ENST00000426712 ADAMTS7Q9UKP4 1686 aa12.16□□□□□ -0.46
COPS6-204ENST00000426712 PXDNLA1KZ92 1463 aa12.15□□□□□ -0.46
COPS6-204ENST00000426712 KCNA3P22001 575 aa12.15□□□□□ -0.46
COPS6-204ENST00000426712 MTHFSP49914 203 aa12.15□□□□□ -0.46
COPS6-204ENST00000426712 CABP4P57796 275 aa12.15□□□□□ -0.46
COPS6-204ENST00000426712 ZNF530Q6P9A1 599 aaPredicted RBP12.15□□□□□ -0.46
COPS6-204ENST00000426712 NFATC2IPQ8NCF5 419 aa12.15□□□□□ -0.46
COPS6-204ENST00000426712 POLR3GLQ9BT43 218 aa12.15□□□□□ -0.46
COPS6-204ENST00000426712 TJP1Q07157 1748 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 C10orf71Q711Q0 1435 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 KIF3CO14782 793 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 HSPA6P17066 643 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 IL13P35225 146 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 RFC4P35249 363 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 MORC1Q86VD1 984 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 PCGF6Q9BYE7 350 aa12.14□□□□□ -0.47
COPS6-204ENST00000426712 AEBP1Q8IUX7 1158 aa12.13□□□□□ -0.47
COPS6-204ENST00000426712 WWC3Q9ULE0 1092 aa12.13□□□□□ -0.47
COPS6-204ENST00000426712 AFDNP55196 1824 aaKnown RBP12.13□□□□□ -0.47
COPS6-204ENST00000426712 CCDC88AQ3V6T2 1871 aa12.12□□□□□ -0.47
COPS6-204ENST00000426712 DPEP1P16444 411 aa12.12□□□□□ -0.47
COPS6-204ENST00000426712 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
COPS6-204ENST00000426712 C1orf141Q5JVX7 400 aa12.12□□□□□ -0.47
COPS6-204ENST00000426712 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
COPS6-204ENST00000426712 ZNF526Q8TF50 670 aaPredicted RBP12.12□□□□□ -0.47
COPS6-204ENST00000426712 CCDC87Q9NVE4 849 aa12.12□□□□□ -0.47
COPS6-204ENST00000426712 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
COPS6-204ENST00000426712 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
COPS6-204ENST00000426712 TM4SF1P30408 202 aa12.11□□□□□ -0.47
COPS6-204ENST00000426712 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
COPS6-204ENST00000426712 INTS5Q6P9B9 1019 aaKnown RBP12.11□□□□□ -0.47
COPS6-204ENST00000426712 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
COPS6-204ENST00000426712 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
COPS6-204ENST00000426712 BCS1LQ9Y276 419 aa12.1□□□□□ -0.47
COPS6-204ENST00000426712 KNSTRNQ9Y448 316 aa12.1□□□□□ -0.47
COPS6-204ENST00000426712 NRXN2Q9P2S2 1712 aa12.09□□□□□ -0.47
COPS6-204ENST00000426712 FKBP8Q14318 412 aa12.09□□□□□ -0.47
COPS6-204ENST00000426712 ARHGAP27Q6ZUM4 889 aa12.09□□□□□ -0.47
COPS6-204ENST00000426712 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
COPS6-204ENST00000426712 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
COPS6-204ENST00000426712 UBR2Q8IWV8 1755 aa12.08□□□□□ -0.48
COPS6-204ENST00000426712 PER1O15534 1290 aaPredicted RBP12.08□□□□□ -0.48
COPS6-204ENST00000426712 FCHSD2O94868 740 aa12.08□□□□□ -0.48
COPS6-204ENST00000426712 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
COPS6-204ENST00000426712 PIM2Q9P1W9 311 aa12.08□□□□□ -0.48
COPS6-204ENST00000426712 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
COPS6-204ENST00000426712 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
COPS6-204ENST00000426712 TOMM70O94826 608 aa12.07□□□□□ -0.48
COPS6-204ENST00000426712 CYP19A1P11511 503 aaPredicted RBP12.07□□□□□ -0.48
COPS6-204ENST00000426712 DDR1Q08345 913 aa12.07□□□□□ -0.48
COPS6-204ENST00000426712 DNAJC5GQ8N7S2 189 aa12.07□□□□□ -0.48
COPS6-204ENST00000426712 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
COPS6-204ENST00000426712 MRC1P22897 1456 aa12.07□□□□□ -0.48
COPS6-204ENST00000426712 POLRMTO00411 1230 aaKnown RBP12.06□□□□□ -0.48
COPS6-204ENST00000426712 DNAJC10Q8IXB1 793 aa12.06□□□□□ -0.48
COPS6-204ENST00000426712 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
COPS6-204ENST00000426712 SIPA1L3O60292 1781 aaPredicted RBP12.05□□□□□ -0.48
COPS6-204ENST00000426712 APLP1P51693 650 aa12.05□□□□□ -0.48
COPS6-204ENST00000426712 C9orf131Q5VYM1 1079 aa12.05□□□□□ -0.48
COPS6-204ENST00000426712 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
COPS6-204ENST00000426712 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms