RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 TCP11L2Q8N4U5 519 aa12.14□□□□□ -0.47
TPM3P4-201ENST00000425942 ANKRD24Q8TF21 1146 aa12.14□□□□□ -0.47
TPM3P4-201ENST00000425942 AXIN2Q9Y2T1 843 aa12.14□□□□□ -0.47
TPM3P4-201ENST00000425942 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
TPM3P4-201ENST00000425942 LARP1Q6PKG0 1096 aaKnown RBP12.13□□□□□ -0.47
TPM3P4-201ENST00000425942 TOM1L2Q6ZVM7 507 aa12.13□□□□□ -0.47
TPM3P4-201ENST00000425942 POLKQ9UBT6 870 aa12.13□□□□□ -0.47
TPM3P4-201ENST00000425942 EMILIN1Q9Y6C2 1016 aa12.13□□□□□ -0.47
TPM3P4-201ENST00000425942 VIRMAQ69YN4 1812 aaKnown RBP12.13□□□□□ -0.47
TPM3P4-201ENST00000425942 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
TPM3P4-201ENST00000425942 POTEMA6NI47 508 aa12.12□□□□□ -0.47
TPM3P4-201ENST00000425942 G3V3G9 751 aa12.12□□□□□ -0.47
TPM3P4-201ENST00000425942 OVOS2A0A0G2JMS6 1433 aa12.11□□□□□ -0.47
TPM3P4-201ENST00000425942 DOT1LQ8TEK3 1739 aa12.11□□□□□ -0.47
TPM3P4-201ENST00000425942 CC2D1BQ5T0F9 858 aaKnown RBP12.11□□□□□ -0.47
TPM3P4-201ENST00000425942 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
TPM3P4-201ENST00000425942 BCL9O00512 1426 aa12.11□□□□□ -0.47
TPM3P4-201ENST00000425942 RALBP1Q15311 655 aa12.1□□□□□ -0.47
TPM3P4-201ENST00000425942 TMEM121BQ9BXQ6 578 aaPredicted RBP12.1□□□□□ -0.47
TPM3P4-201ENST00000425942 MEGF6O75095 1541 aa12.1□□□□□ -0.47
TPM3P4-201ENST00000425942 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
TPM3P4-201ENST00000425942 KDRP35968 1356 aa12.09□□□□□ -0.47
TPM3P4-201ENST00000425942 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
TPM3P4-201ENST00000425942 FBXO22Q8NEZ5 403 aa12.09□□□□□ -0.47
TPM3P4-201ENST00000425942 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
TPM3P4-201ENST00000425942 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.48
TPM3P4-201ENST00000425942 DDX10Q13206 875 aaKnown RBP12.08□□□□□ -0.48
TPM3P4-201ENST00000425942 HSP90AB2PQ58FF8 381 aa12.08□□□□□ -0.48
TPM3P4-201ENST00000425942 SEPT12Q8IYM1 358 aa12.08□□□□□ -0.48
TPM3P4-201ENST00000425942 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
TPM3P4-201ENST00000425942 A0A0G2JS52 829 aa12.07□□□□□ -0.48
TPM3P4-201ENST00000425942 PPM1GO15355 546 aaPredicted RBP12.07□□□□□ -0.48
TPM3P4-201ENST00000425942 IL2RBP14784 551 aa12.07□□□□□ -0.48
TPM3P4-201ENST00000425942 MYT1Q01538 1121 aa12.07□□□□□ -0.48
TPM3P4-201ENST00000425942 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
TPM3P4-201ENST00000425942 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
TPM3P4-201ENST00000425942 FBLN1P23142 703 aa12.06□□□□□ -0.48
TPM3P4-201ENST00000425942 EIF4A2Q14240 407 aaKnown RBP12.06□□□□□ -0.48
TPM3P4-201ENST00000425942 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
TPM3P4-201ENST00000425942 MYBBP1AQ9BQG0 1328 aaKnown RBP12.06□□□□□ -0.48
TPM3P4-201ENST00000425942 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
TPM3P4-201ENST00000425942 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 ITGB4P16144 1822 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 ST18O60284 1047 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 MTHFSP49914 203 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 DDB1Q16531 1140 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 ILDR2Q71H61 639 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 KRT27Q7Z3Y8 459 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 RREB1Q92766 1687 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 ADAMTS7Q9UKP4 1686 aa12.05□□□□□ -0.48
TPM3P4-201ENST00000425942 BTAF1O14981 1849 aa12.04□□□□□ -0.48
TPM3P4-201ENST00000425942 PPP2R1AP30153 589 aa12.04□□□□□ -0.48
TPM3P4-201ENST00000425942 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
TPM3P4-201ENST00000425942 LTV1Q96GA3 475 aaPredicted RBP12.04□□□□□ -0.48
TPM3P4-201ENST00000425942 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
TPM3P4-201ENST00000425942 PDE3BQ13370 1112 aa12.03□□□□□ -0.48
TPM3P4-201ENST00000425942 NBPF6Q5VWK0 638 aa12.03□□□□□ -0.48
TPM3P4-201ENST00000425942 NBPF4Q96M43 638 aa12.03□□□□□ -0.48
TPM3P4-201ENST00000425942 PCDH11XQ9BZA7 1347 aa12.03□□□□□ -0.48
TPM3P4-201ENST00000425942 PCDH11YQ9BZA8 1340 aa12.03□□□□□ -0.48
TPM3P4-201ENST00000425942 TATP17735 454 aaPredicted RBP12.02□□□□□ -0.49
TPM3P4-201ENST00000425942 IL13P35225 146 aa12.02□□□□□ -0.49
TPM3P4-201ENST00000425942 PRKRIP1Q9H875 184 aaPredicted RBP12.02□□□□□ -0.49
TPM3P4-201ENST00000425942 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
TPM3P4-201ENST00000425942 LY75O60449 1722 aa12.01□□□□□ -0.49
TPM3P4-201ENST00000425942 SOCS7O14512 581 aa12.01□□□□□ -0.49
TPM3P4-201ENST00000425942 SNPHO15079 494 aa12.01□□□□□ -0.49
TPM3P4-201ENST00000425942 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
TPM3P4-201ENST00000425942 EYA1Q99502 592 aa12.01□□□□□ -0.49
TPM3P4-201ENST00000425942 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
TPM3P4-201ENST00000425942 CICQ96RK0 1608 aaPredicted RBP12□□□□□ -0.49
TPM3P4-201ENST00000425942 EXOC5O00471 708 aa12□□□□□ -0.49
TPM3P4-201ENST00000425942 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
TPM3P4-201ENST00000425942 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
TPM3P4-201ENST00000425942 CCDC125Q86Z20 511 aa12□□□□□ -0.49
TPM3P4-201ENST00000425942 MRC1P22897 1456 aa12□□□□□ -0.49
TPM3P4-201ENST00000425942 PAPPAQ13219 1627 aa12□□□□□ -0.49
TPM3P4-201ENST00000425942 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
TPM3P4-201ENST00000425942 SIPA1L3O60292 1781 aaPredicted RBP12□□□□□ -0.49
TPM3P4-201ENST00000425942 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
TPM3P4-201ENST00000425942 KAT6BQ8WYB5 2073 aa11.98□□□□□ -0.49
TPM3P4-201ENST00000425942 USHBP1Q8N6Y0 703 aa11.98□□□□□ -0.49
TPM3P4-201ENST00000425942 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
TPM3P4-201ENST00000425942 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
TPM3P4-201ENST00000425942 ANP32CO43423 234 aa11.97□□□□□ -0.49
TPM3P4-201ENST00000425942 AMOTQ4VCS5 1084 aa11.97□□□□□ -0.49
TPM3P4-201ENST00000425942 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
TPM3P4-201ENST00000425942 SULT6B1Q6IMI4 303 aa11.96□□□□□ -0.49
TPM3P4-201ENST00000425942 QSER1Q2KHR3 1735 aa11.96□□□□□ -0.49
TPM3P4-201ENST00000425942 HSP90AB1P08238 724 aaKnown RBP11.95□□□□□ -0.5
TPM3P4-201ENST00000425942 TAF1LQ8IZX4 1826 aa11.95□□□□□ -0.5
TPM3P4-201ENST00000425942 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
TPM3P4-201ENST00000425942 C5P01031 1676 aa11.94□□□□□ -0.5
TPM3P4-201ENST00000425942 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
TPM3P4-201ENST00000425942 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
TPM3P4-201ENST00000425942 MARCH10Q8NA82 808 aaPredicted RBP11.94□□□□□ -0.5
TPM3P4-201ENST00000425942 UPF1Q92900 1129 aaKnown RBP eCLIP11.94□□□□□ -0.5
TPM3P4-201ENST00000425942 PNNQ9H307 717 aaKnown RBP11.94□□□□□ -0.5
TPM3P4-201ENST00000425942 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
TPM3P4-201ENST00000425942 FCHSD2O94868 740 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms