RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
LINC00400-201ENST00000425609 SLC4A9Q96Q91 983 aa8.11□□□□□ -1.11
LINC00400-201ENST00000425609 TUT1Q9H6E5 874 aaKnown RBP8.11□□□□□ -1.11
LINC00400-201ENST00000425609 BACH1O14867 736 aa8.1□□□□□ -1.11
LINC00400-201ENST00000425609 PTCD1O75127 700 aaKnown RBP8.1□□□□□ -1.11
LINC00400-201ENST00000425609 GNRH1P01148 92 aa8.1□□□□□ -1.11
LINC00400-201ENST00000425609 ERCC3P19447 782 aa8.1□□□□□ -1.11
LINC00400-201ENST00000425609 FOXK2Q01167 660 aa8.1□□□□□ -1.11
LINC00400-201ENST00000425609 ESF1Q9H501 851 aaKnown RBP8.1□□□□□ -1.11
LINC00400-201ENST00000425609 SLC19A1P41440 591 aa8.09□□□□□ -1.11
LINC00400-201ENST00000425609 MARSP56192 900 aaKnown RBP8.09□□□□□ -1.11
LINC00400-201ENST00000425609 TSPAN10Q9H1Z9 355 aaPredicted RBP8.09□□□□□ -1.11
LINC00400-201ENST00000425609 ANO2Q9NQ90 1003 aa8.09□□□□□ -1.11
LINC00400-201ENST00000425609 BIN2Q9UBW5 565 aaPredicted RBP8.09□□□□□ -1.11
LINC00400-201ENST00000425609 RBM47A0AV96 593 aaKnown RBP8.08□□□□□ -1.12
LINC00400-201ENST00000425609 MTFR1Q15390 333 aa8.08□□□□□ -1.12
LINC00400-201ENST00000425609 SPRYD7Q5W111 196 aa8.08□□□□□ -1.12
LINC00400-201ENST00000425609 GLYCTKQ8IVS8 523 aa8.08□□□□□ -1.12
LINC00400-201ENST00000425609 SCG3Q8WXD2 468 aaKnown RBP8.08□□□□□ -1.12
LINC00400-201ENST00000425609 SERTAD1Q9UHV2 236 aa8.08□□□□□ -1.12
LINC00400-201ENST00000425609 ATAD2Q6PL18 1390 aa8.08□□□□□ -1.12
LINC00400-201ENST00000425609 ARHGAP4P98171 946 aa8.07□□□□□ -1.12
LINC00400-201ENST00000425609 SF3B2Q13435 895 aaKnown RBP8.07□□□□□ -1.12
LINC00400-201ENST00000425609 MTMR3Q13615 1198 aa8.07□□□□□ -1.12
LINC00400-201ENST00000425609 KDF1Q8NAX2 398 aaPredicted RBP8.07□□□□□ -1.12
LINC00400-201ENST00000425609 HELQQ8TDG4 1101 aa8.07□□□□□ -1.12
LINC00400-201ENST00000425609 RAB6BQ9NRW1 208 aa8.07□□□□□ -1.12
LINC00400-201ENST00000425609 PGPEP1Q9NXJ5 209 aa8.07□□□□□ -1.12
LINC00400-201ENST00000425609 EMILIN1Q9Y6C2 1016 aa8.07□□□□□ -1.12
LINC00400-201ENST00000425609 A0A1W2PRU2 124 aa8.06□□□□□ -1.12
LINC00400-201ENST00000425609 IL2RAP01589 272 aa8.06□□□□□ -1.12
LINC00400-201ENST00000425609 FKBP4Q02790 459 aaKnown RBP eCLIP8.06□□□□□ -1.12
LINC00400-201ENST00000425609 ESCO1Q5FWF5 840 aa8.06□□□□□ -1.12
LINC00400-201ENST00000425609 ARHGEF10LQ9HCE6 1279 aa8.06□□□□□ -1.12
LINC00400-201ENST00000425609 SCHIP1Q9P0W5 487 aaPredicted RBP8.06□□□□□ -1.12
LINC00400-201ENST00000425609 HRH3Q9Y5N1 445 aa8.06□□□□□ -1.12
LINC00400-201ENST00000425609 UNCXA6NJT0 531 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 A6NJY4 79 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 ADH1AP07327 375 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 NPR3P17342 541 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 SMTNP53814 917 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 NAA30Q147X3 362 aaPredicted RBP8.05□□□□□ -1.12
LINC00400-201ENST00000425609 POTEAQ6S8J7 498 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 NPAS4Q8IUM7 802 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 SLC9A9Q8IVB4 645 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 STAG2Q8N3U4 1231 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 XAGE2Q96GT9 111 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 PKD2L1Q9P0L9 805 aa8.05□□□□□ -1.12
LINC00400-201ENST00000425609 E9PSI1 815 aa8.04□□□□□ -1.12
LINC00400-201ENST00000425609 NNTQ13423 1086 aa8.04□□□□□ -1.12
LINC00400-201ENST00000425609 C2orf49Q9BVC5 232 aaPredicted RBP8.04□□□□□ -1.12
LINC00400-201ENST00000425609 IQSEC3Q9UPP2 1182 aaPredicted RBP8.04□□□□□ -1.12
LINC00400-201ENST00000425609 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
LINC00400-201ENST00000425609 ANKRD33BA6NCL7 494 aa8.03□□□□□ -1.12
LINC00400-201ENST00000425609 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
LINC00400-201ENST00000425609 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
LINC00400-201ENST00000425609 ZNF697Q5TEC3 545 aa8.03□□□□□ -1.12
LINC00400-201ENST00000425609 ZNF598Q86UK7 904 aaKnown RBP8.03□□□□□ -1.12
LINC00400-201ENST00000425609 KLF16Q9BXK1 252 aaPredicted RBP8.03□□□□□ -1.12
LINC00400-201ENST00000425609 SAP130Q9H0E3 1048 aa8.03□□□□□ -1.12
LINC00400-201ENST00000425609 PPP1R12BO60237 982 aaPredicted RBP8.02□□□□□ -1.13
LINC00400-201ENST00000425609 CBLBQ13191 982 aa8.02□□□□□ -1.13
LINC00400-201ENST00000425609 Q6ZVU0 165 aa8.02□□□□□ -1.13
LINC00400-201ENST00000425609 ZNF295-AS1Q8N0V1 137 aa8.02□□□□□ -1.13
LINC00400-201ENST00000425609 CHMP7Q8WUX9 453 aaPredicted RBP8.02□□□□□ -1.13
LINC00400-201ENST00000425609 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
LINC00400-201ENST00000425609 ESYT1Q9BSJ8 1104 aa8.02□□□□□ -1.13
LINC00400-201ENST00000425609 DCTN4Q9UJW0 460 aa8.02□□□□□ -1.13
LINC00400-201ENST00000425609 MAPK1P28482 360 aa8.01□□□□□ -1.13
LINC00400-201ENST00000425609 PSMA6P60900 246 aaKnown RBP8.01□□□□□ -1.13
LINC00400-201ENST00000425609 CLN3Q13286 438 aa8.01□□□□□ -1.13
LINC00400-201ENST00000425609 TLR1Q15399 786 aa8.01□□□□□ -1.13
LINC00400-201ENST00000425609 C16orf46Q6P387 395 aa8.01□□□□□ -1.13
LINC00400-201ENST00000425609 ASB16Q96NS5 453 aa8.01□□□□□ -1.13
LINC00400-201ENST00000425609 FHDC1Q9C0D6 1143 aaPredicted RBP8.01□□□□□ -1.13
LINC00400-201ENST00000425609 CDK2AP1O14519 115 aa8□□□□□ -1.13
LINC00400-201ENST00000425609 TNFRSF10BO14763 440 aa8□□□□□ -1.13
LINC00400-201ENST00000425609 ZNF16P17020 682 aaPredicted RBP8□□□□□ -1.13
LINC00400-201ENST00000425609 SNIP1Q8TAD8 396 aaKnown RBP8□□□□□ -1.13
LINC00400-201ENST00000425609 VTI1AQ96AJ9 217 aa8□□□□□ -1.13
LINC00400-201ENST00000425609 ITPKCQ96DU7 683 aa8□□□□□ -1.13
LINC00400-201ENST00000425609 QTRT2Q9H974 415 aaKnown RBP8□□□□□ -1.13
LINC00400-201ENST00000425609 WASF2Q9Y6W5 498 aa8□□□□□ -1.13
LINC00400-201ENST00000425609 A0A0G2JS52 829 aa7.99□□□□□ -1.13
LINC00400-201ENST00000425609 FAM13AO94988 1023 aa7.99□□□□□ -1.13
LINC00400-201ENST00000425609 MPSTP25325 297 aa7.99□□□□□ -1.13
LINC00400-201ENST00000425609 FOXC1Q12948 553 aa7.99□□□□□ -1.13
LINC00400-201ENST00000425609 COX20Q5RI15 118 aa7.99□□□□□ -1.13
LINC00400-201ENST00000425609 FBXO33Q7Z6M2 555 aa7.99□□□□□ -1.13
LINC00400-201ENST00000425609 MYO19Q96H55 970 aa7.99□□□□□ -1.13
LINC00400-201ENST00000425609 BCL2L13Q9BXK5 485 aa7.99□□□□□ -1.13
LINC00400-201ENST00000425609 EML1O00423 815 aa7.98□□□□□ -1.13
LINC00400-201ENST00000425609 GDF9O60383 454 aa7.98□□□□□ -1.13
LINC00400-201ENST00000425609 ZIC2O95409 532 aaPredicted RBP7.98□□□□□ -1.13
LINC00400-201ENST00000425609 TIMP2P16035 220 aa7.98□□□□□ -1.13
LINC00400-201ENST00000425609 PTGIRP43119 386 aa7.98□□□□□ -1.13
LINC00400-201ENST00000425609 HIRAP54198 1017 aaPredicted RBP7.98□□□□□ -1.13
LINC00400-201ENST00000425609 ZDHHC1Q8WTX9 485 aa7.98□□□□□ -1.13
LINC00400-201ENST00000425609 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
LINC00400-201ENST00000425609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms