RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 MYBBP1AQ9BQG0 1328 aaKnown RBP9.54□□□□□ -0.88
CHCHD3P1-201ENST00000425516 IL13P35225 146 aa9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 EVA1CP58658 441 aa9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 EIF4A2Q14240 407 aaKnown RBP9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 GPR153Q6NV75 609 aa9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 TRPC5Q9UL62 973 aaPredicted RBP9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 SPATA31A5Q5VU36 1347 aa9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 SPATA31A7Q8IWB4 1347 aa9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
CHCHD3P1-201ENST00000425516 ANP32CO43423 234 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 DSG2Q14126 1118 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 NCAPD2Q15021 1401 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 DIEXFQ68CQ4 756 aaKnown RBP9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 TMC2Q8TDI7 906 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 SPATA31A1Q5TZJ5 1347 aa9.52□□□□□ -0.89
CHCHD3P1-201ENST00000425516 CRB1P82279 1406 aa9.51□□□□□ -0.89
CHCHD3P1-201ENST00000425516 ONECUT3O60422 494 aaPredicted RBP9.51□□□□□ -0.89
CHCHD3P1-201ENST00000425516 HOXB1P14653 301 aaPredicted RBP9.51□□□□□ -0.89
CHCHD3P1-201ENST00000425516 EMP3P54852 163 aa9.51□□□□□ -0.89
CHCHD3P1-201ENST00000425516 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
CHCHD3P1-201ENST00000425516 LTV1Q96GA3 475 aaPredicted RBP9.51□□□□□ -0.89
CHCHD3P1-201ENST00000425516 EYA1Q99502 592 aa9.51□□□□□ -0.89
CHCHD3P1-201ENST00000425516 GLI3P10071 1580 aa9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 FAM205CA6NFA0 338 aa9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 DIAPH1O60610 1272 aaKnown RBP9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 CCDC184Q52MB2 194 aa9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 TOM1L2Q6ZVM7 507 aa9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 BBXQ8WY36 941 aaPredicted RBP9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 CRISPLD2Q9H0B8 497 aa9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 THRAP3Q9Y2W1 955 aaKnown RBP9.5□□□□□ -0.89
CHCHD3P1-201ENST00000425516 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
CHCHD3P1-201ENST00000425516 RBM6P78332 1123 aaKnown RBP9.49□□□□□ -0.89
CHCHD3P1-201ENST00000425516 BARGINQ6ZT62 677 aa9.49□□□□□ -0.89
CHCHD3P1-201ENST00000425516 CDAN1Q8IWY9 1227 aa9.49□□□□□ -0.89
CHCHD3P1-201ENST00000425516 TCP11L2Q8N4U5 519 aa9.49□□□□□ -0.89
CHCHD3P1-201ENST00000425516 GPHNQ9NQX3 736 aaPredicted RBP9.49□□□□□ -0.89
CHCHD3P1-201ENST00000425516 NLRP2Q9NX02 1062 aa9.49□□□□□ -0.89
CHCHD3P1-201ENST00000425516 IGSF1Q8N6C5 1336 aa9.49□□□□□ -0.89
CHCHD3P1-201ENST00000425516 FAM208AQ9UK61 1670 aaKnown RBP9.48□□□□□ -0.89
CHCHD3P1-201ENST00000425516 DISP2A7MBM2 1401 aa9.48□□□□□ -0.89
CHCHD3P1-201ENST00000425516 RGPD1P0DJD0 1748 aa9.48□□□□□ -0.89
CHCHD3P1-201ENST00000425516 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
CHCHD3P1-201ENST00000425516 CFAP53Q96M91 514 aa9.48□□□□□ -0.89
CHCHD3P1-201ENST00000425516 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
CHCHD3P1-201ENST00000425516 KDRP35968 1356 aa9.48□□□□□ -0.89
CHCHD3P1-201ENST00000425516 RGPD2P0DJD1 1756 aa9.47□□□□□ -0.89
CHCHD3P1-201ENST00000425516 RXRBP28702 533 aa9.47□□□□□ -0.89
CHCHD3P1-201ENST00000425516 FOXK1P85037 733 aa9.47□□□□□ -0.89
CHCHD3P1-201ENST00000425516 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
CHCHD3P1-201ENST00000425516 PLPP6Q8IY26 295 aa9.47□□□□□ -0.89
CHCHD3P1-201ENST00000425516 USP35Q9P2H5 1018 aa9.47□□□□□ -0.89
CHCHD3P1-201ENST00000425516 CCDC9Q9Y3X0 531 aaKnown RBP9.47□□□□□ -0.89
CHCHD3P1-201ENST00000425516 AEBP1Q8IUX7 1158 aa9.46□□□□□ -0.9
CHCHD3P1-201ENST00000425516 RYDENQ9NUL5 291 aaKnown RBP9.46□□□□□ -0.9
CHCHD3P1-201ENST00000425516 IL2RBP14784 551 aa9.45□□□□□ -0.9
CHCHD3P1-201ENST00000425516 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
CHCHD3P1-201ENST00000425516 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
CHCHD3P1-201ENST00000425516 MEGF6O75095 1541 aa9.45□□□□□ -0.9
CHCHD3P1-201ENST00000425516 THSD7AQ9UPZ6 1657 aa9.45□□□□□ -0.9
CHCHD3P1-201ENST00000425516 CCER2I3L3R5 266 aa9.44□□□□□ -0.9
CHCHD3P1-201ENST00000425516 U2SURPO15042 1029 aaKnown RBP9.44□□□□□ -0.9
CHCHD3P1-201ENST00000425516 HMOX1P09601 288 aa9.44□□□□□ -0.9
CHCHD3P1-201ENST00000425516 SEPT12Q8IYM1 358 aa9.44□□□□□ -0.9
CHCHD3P1-201ENST00000425516 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
CHCHD3P1-201ENST00000425516 NUDCQ9Y266 331 aa9.44□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PLEKHG2Q9H7P9 1386 aa9.44□□□□□ -0.9
CHCHD3P1-201ENST00000425516 OVOS2A0A0G2JMS6 1433 aa9.43□□□□□ -0.9
CHCHD3P1-201ENST00000425516 RGS12O14924 1447 aa9.43□□□□□ -0.9
CHCHD3P1-201ENST00000425516 FCHSD2O94868 740 aa9.43□□□□□ -0.9
CHCHD3P1-201ENST00000425516 NUDT7P0C024 238 aa9.43□□□□□ -0.9
CHCHD3P1-201ENST00000425516 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
CHCHD3P1-201ENST00000425516 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PLEKHF1Q96S99 279 aa9.43□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 EXOC5O00471 708 aa9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 RIMBP2O15034 1052 aa9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 U2AF1L5P0DN76 240 aaPredicted RBP9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 U2AF1Q01081 240 aaKnown RBP eCLIP9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 MRS2Q9HD23 443 aa9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 ADAMTS8Q9UP79 889 aa9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 WNK3Q9BYP7 1800 aa9.42□□□□□ -0.9
CHCHD3P1-201ENST00000425516 DDB1Q16531 1140 aa9.41□□□□□ -0.9
CHCHD3P1-201ENST00000425516 VARS2Q5ST30 1063 aaKnown RBP9.41□□□□□ -0.9
CHCHD3P1-201ENST00000425516 MARCH10Q8NA82 808 aaPredicted RBP9.41□□□□□ -0.9
CHCHD3P1-201ENST00000425516 ZCRB1Q8TBF4 217 aaKnown RBP9.41□□□□□ -0.9
CHCHD3P1-201ENST00000425516 PHACTR3Q96KR7 559 aa9.41□□□□□ -0.9
CHCHD3P1-201ENST00000425516 CFAP44Q96MT7 982 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms