RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.49
CCDC12-202ENST00000425441 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
CCDC12-202ENST00000425441 GRIN3BO60391 1043 aa18.12■□□□□ 0.49
CCDC12-202ENST00000425441 NKX1-1Q15270 411 aaPredicted RBP18.12■□□□□ 0.49
CCDC12-202ENST00000425441 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
CCDC12-202ENST00000425441 AK7Q96M32 723 aa18.12■□□□□ 0.49
CCDC12-202ENST00000425441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC12-202ENST00000425441 HAX1O00165 279 aa18.11■□□□□ 0.49
CCDC12-202ENST00000425441 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
CCDC12-202ENST00000425441 PLEKHG2Q9H7P9 1386 aa18.1■□□□□ 0.49
CCDC12-202ENST00000425441 MSL1Q68DK7 614 aa18.1■□□□□ 0.49
CCDC12-202ENST00000425441 IFNL2Q8IZJ0 200 aa18.09■□□□□ 0.49
CCDC12-202ENST00000425441 EYA1Q99502 592 aa18.09■□□□□ 0.49
CCDC12-202ENST00000425441 CD2APQ9Y5K6 639 aa18.09■□□□□ 0.49
CCDC12-202ENST00000425441 PIGBQ92521 554 aa18.08■□□□□ 0.48
CCDC12-202ENST00000425441 POLR3GLQ9BT43 218 aa18.08■□□□□ 0.48
CCDC12-202ENST00000425441 TMOD3Q9NYL9 352 aa18.08■□□□□ 0.48
CCDC12-202ENST00000425441 POLKQ9UBT6 870 aa18.08■□□□□ 0.48
CCDC12-202ENST00000425441 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
CCDC12-202ENST00000425441 C1QTNF8P60827 252 aa18.07■□□□□ 0.48
CCDC12-202ENST00000425441 LOC102724428A0A0B4J2F2 783 aa18.05■□□□□ 0.48
CCDC12-202ENST00000425441 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
CCDC12-202ENST00000425441 PHKG2P15735 406 aa18.05■□□□□ 0.48
CCDC12-202ENST00000425441 SSFA2P28290 1259 aa18.05■□□□□ 0.48
CCDC12-202ENST00000425441 SIK1P57059 783 aa18.05■□□□□ 0.48
CCDC12-202ENST00000425441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
CCDC12-202ENST00000425441 PHF14O94880 888 aa18.04■□□□□ 0.48
CCDC12-202ENST00000425441 YBX3P16989 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCDC12-202ENST00000425441 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.481e-7■□□□□ 8.4
CCDC12-202ENST00000425441 SENP3-EIF4A1A0A087X0R7 540 aa18.03■□□□□ 0.48
CCDC12-202ENST00000425441 EIF4A2Q14240 407 aaKnown RBP18.03■□□□□ 0.48
CCDC12-202ENST00000425441 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.48
CCDC12-202ENST00000425441 ATP6V1AP38606 617 aa18.02■□□□□ 0.48
CCDC12-202ENST00000425441 TNNT2P45379 298 aaPredicted RBP18.01■□□□□ 0.47
CCDC12-202ENST00000425441 LINC00116Q8NCU8 138 aa18.01■□□□□ 0.47
CCDC12-202ENST00000425441 IGSF1Q8N6C5 1336 aa18■□□□□ 0.47
CCDC12-202ENST00000425441 HSPA5P11021 654 aaKnown RBP18■□□□□ 0.47
CCDC12-202ENST00000425441 ASAP1Q9ULH1 1129 aa18■□□□□ 0.47
CCDC12-202ENST00000425441 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
CCDC12-202ENST00000425441 ERVV-2B6SEH9 535 aa17.99■□□□□ 0.47
CCDC12-202ENST00000425441 GNPATO15228 680 aa17.99■□□□□ 0.47
CCDC12-202ENST00000425441 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
CCDC12-202ENST00000425441 ITPK1Q13572 414 aa17.98■□□□□ 0.47
CCDC12-202ENST00000425441 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
CCDC12-202ENST00000425441 PANK3Q9H999 370 aa17.98■□□□□ 0.47
CCDC12-202ENST00000425441 ATG3Q9NT62 314 aa17.98■□□□□ 0.47
CCDC12-202ENST00000425441 AMOTQ4VCS5 1084 aa17.97■□□□□ 0.47
CCDC12-202ENST00000425441 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
CCDC12-202ENST00000425441 KDRP35968 1356 aa17.96■□□□□ 0.47
CCDC12-202ENST00000425441 MKRN4PQ13434 485 aaPredicted RBP17.96■□□□□ 0.47
CCDC12-202ENST00000425441 ATP10DQ9P241 1426 aa17.96■□□□□ 0.47
CCDC12-202ENST00000425441 RTCBQ9Y3I0 505 aaKnown RBP17.95■□□□□ 0.46
CCDC12-202ENST00000425441 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
CCDC12-202ENST00000425441 ZNF530Q6P9A1 599 aaPredicted RBP17.94■□□□□ 0.46
CCDC12-202ENST00000425441 SMIM5Q71RC9 77 aa17.94■□□□□ 0.46
CCDC12-202ENST00000425441 MORC1Q86VD1 984 aa17.94■□□□□ 0.46
CCDC12-202ENST00000425441 COL5A3P25940 1745 aaPredicted RBP17.93■□□□□ 0.46
CCDC12-202ENST00000425441 CABP4P57796 275 aa17.93■□□□□ 0.46
CCDC12-202ENST00000425441 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
CCDC12-202ENST00000425441 RC3H1Q5TC82 1133 aaKnown RBP17.93■□□□□ 0.46
CCDC12-202ENST00000425441 SPDYE1Q8NFV5 336 aaPredicted RBP17.93■□□□□ 0.46
CCDC12-202ENST00000425441 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
CCDC12-202ENST00000425441 GPBP1L1Q9HC44 474 aaPredicted RBP17.92■□□□□ 0.46
CCDC12-202ENST00000425441 CNTNAP4Q9C0A0 1308 aa17.92■□□□□ 0.46
CCDC12-202ENST00000425441 KIF13BQ9NQT8 1826 aa17.91■□□□□ 0.46
CCDC12-202ENST00000425441 KDM6AO15550 1401 aaPredicted RBP17.91■□□□□ 0.46
CCDC12-202ENST00000425441 MMP10P09238 476 aa17.91■□□□□ 0.46
CCDC12-202ENST00000425441 MTHFSP49914 203 aa17.91■□□□□ 0.46
CCDC12-202ENST00000425441 KNSTRNQ9Y448 316 aa17.91■□□□□ 0.46
CCDC12-202ENST00000425441 ADCY9O60503 1353 aa17.91■□□□□ 0.46
CCDC12-202ENST00000425441 RPS6KA4O75676 772 aa17.89■□□□□ 0.45
CCDC12-202ENST00000425441 RFC4P35249 363 aa17.89■□□□□ 0.45
CCDC12-202ENST00000425441 TGFB2P61812 414 aa17.89■□□□□ 0.45
CCDC12-202ENST00000425441 SLC4A9Q96Q91 983 aa17.89■□□□□ 0.45
CCDC12-202ENST00000425441 CCDC87Q9NVE4 849 aa17.89■□□□□ 0.45
CCDC12-202ENST00000425441 CICQ96RK0 1608 aaPredicted RBP17.89■□□□□ 0.45
CCDC12-202ENST00000425441 ARHGEF1Q92888 912 aaKnown RBP17.88■□□□□ 0.45
CCDC12-202ENST00000425441 SSUH2Q9Y2M2 353 aa17.88■□□□□ 0.45
CCDC12-202ENST00000425441 UTRNP46939 3433 aa17.88■□□□□ 0.45
CCDC12-202ENST00000425441 C4AP0C0L4 1744 aa17.87■□□□□ 0.45
CCDC12-202ENST00000425441 SULT6B1Q6IMI4 303 aa17.87■□□□□ 0.45
CCDC12-202ENST00000425441 AEBP1Q8IUX7 1158 aa17.87■□□□□ 0.45
CCDC12-202ENST00000425441 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
CCDC12-202ENST00000425441 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
CCDC12-202ENST00000425441 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
CCDC12-202ENST00000425441 PARP3Q9Y6F1 533 aa17.86■□□□□ 0.45
CCDC12-202ENST00000425441 C10orf71Q711Q0 1435 aa17.86■□□□□ 0.45
CCDC12-202ENST00000425441 KIAA1551Q9HCM1 1747 aa17.86■□□□□ 0.45
CCDC12-202ENST00000425441 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
CCDC12-202ENST00000425441 GYS1P13807 737 aa17.85■□□□□ 0.45
CCDC12-202ENST00000425441 N4BP2Q86UW6 1770 aaPredicted RBP17.84■□□□□ 0.45
CCDC12-202ENST00000425441 PTCD1O75127 700 aaKnown RBP17.84■□□□□ 0.45
CCDC12-202ENST00000425441 PRKAR2AP13861 404 aaKnown RBP17.84■□□□□ 0.45
CCDC12-202ENST00000425441 IL13P35225 146 aa17.84■□□□□ 0.45
CCDC12-202ENST00000425441 NFATC2IPQ8NCF5 419 aa17.84■□□□□ 0.45
CCDC12-202ENST00000425441 ZNF526Q8TF50 670 aaPredicted RBP17.84■□□□□ 0.45
CCDC12-202ENST00000425441 TJP1Q07157 1748 aa17.84■□□□□ 0.45
CCDC12-202ENST00000425441 EVX2Q03828 476 aa17.83■□□□□ 0.44
CCDC12-202ENST00000425441 AKAP4Q5JQC9 854 aa17.83■□□□□ 0.44
CCDC12-202ENST00000425441 MYH14Q7Z406 1995 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms