RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 ITPK1Q13572 414 aa20.95■□□□□ 0.94
HDAC11-210ENST00000425430 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
HDAC11-210ENST00000425430 IFFO2Q5TF58 517 aa20.94■□□□□ 0.94
HDAC11-210ENST00000425430 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
HDAC11-210ENST00000425430 PHKG2P15735 406 aa20.93■□□□□ 0.94
HDAC11-210ENST00000425430 IFNL2Q8IZJ0 200 aa20.93■□□□□ 0.94
HDAC11-210ENST00000425430 MMP10P09238 476 aa20.92■□□□□ 0.94
HDAC11-210ENST00000425430 HSPA6P17066 643 aa20.92■□□□□ 0.94
HDAC11-210ENST00000425430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.92■□□□□ 0.94
HDAC11-210ENST00000425430 CICQ96RK0 1608 aaPredicted RBP20.92■□□□□ 0.94
HDAC11-210ENST00000425430 N4BP2Q86UW6 1770 aaPredicted RBP20.9■□□□□ 0.94
HDAC11-210ENST00000425430 PXDNLA1KZ92 1463 aa20.9■□□□□ 0.94
HDAC11-210ENST00000425430 ATG3Q9NT62 314 aa20.9■□□□□ 0.94
HDAC11-210ENST00000425430 KIF13BQ9NQT8 1826 aa20.9■□□□□ 0.94
HDAC11-210ENST00000425430 TNNT2P45379 298 aaPredicted RBP20.89■□□□□ 0.93
HDAC11-210ENST00000425430 POLKQ9UBT6 870 aa20.89■□□□□ 0.93
HDAC11-210ENST00000425430 KIAA1551Q9HCM1 1747 aa20.89■□□□□ 0.93
HDAC11-210ENST00000425430 KDRP35968 1356 aa20.88■□□□□ 0.93
HDAC11-210ENST00000425430 EIF4A2Q14240 407 aaKnown RBP20.88■□□□□ 0.93
HDAC11-210ENST00000425430 RBM42Q9BTD8 480 aaKnown RBP20.87■□□□□ 0.93
HDAC11-210ENST00000425430 RTCBQ9Y3I0 505 aaKnown RBP20.87■□□□□ 0.93
HDAC11-210ENST00000425430 COL5A3P25940 1745 aaPredicted RBP20.87■□□□□ 0.93
HDAC11-210ENST00000425430 C10orf71Q711Q0 1435 aa20.86■□□□□ 0.93
HDAC11-210ENST00000425430 KIF3CO14782 793 aa20.85■□□□□ 0.93
HDAC11-210ENST00000425430 TRAPPC3LQ5T215 181 aa20.85■□□□□ 0.93
HDAC11-210ENST00000425430 BCS1LQ9Y276 419 aa20.85■□□□□ 0.93
HDAC11-210ENST00000425430 ZNF831Q5JPB2 1677 aa20.85■□□□□ 0.93
HDAC11-210ENST00000425430 C4AP0C0L4 1744 aa20.84■□□□□ 0.93
HDAC11-210ENST00000425430 PLEKHG2Q9H7P9 1386 aa20.83■□□□□ 0.92
HDAC11-210ENST00000425430 A0A0G2JLW4 131 aa20.82■□□□□ 0.92
HDAC11-210ENST00000425430 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
HDAC11-210ENST00000425430 TGFB2P61812 414 aa20.82■□□□□ 0.92
HDAC11-210ENST00000425430 AMER1Q5JTC6 1135 aaPredicted RBP20.82■□□□□ 0.92
HDAC11-210ENST00000425430 NLGN1Q8N2Q7 840 aa20.82■□□□□ 0.92
HDAC11-210ENST00000425430 SLC4A9Q96Q91 983 aa20.82■□□□□ 0.92
HDAC11-210ENST00000425430 HSP90AB1P08238 724 aaKnown RBP20.81■□□□□ 0.92
HDAC11-210ENST00000425430 ARHGEF1Q92888 912 aaKnown RBP20.81■□□□□ 0.92
HDAC11-210ENST00000425430 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
HDAC11-210ENST00000425430 CNTNAP4Q9C0A0 1308 aa20.8■□□□□ 0.92
HDAC11-210ENST00000425430 KDM6AO15550 1401 aaPredicted RBP20.8■□□□□ 0.92
HDAC11-210ENST00000425430 ERVV-2B6SEH9 535 aa20.8■□□□□ 0.92
HDAC11-210ENST00000425430 ADRA2BP18089 450 aa20.8■□□□□ 0.92
HDAC11-210ENST00000425430 RFC4P35249 363 aa20.8■□□□□ 0.92
HDAC11-210ENST00000425430 ZNF530Q6P9A1 599 aaPredicted RBP20.8■□□□□ 0.92
HDAC11-210ENST00000425430 DCAF5Q96JK2 942 aa20.8■□□□□ 0.92
HDAC11-210ENST00000425430 KNSTRNQ9Y448 316 aa20.8■□□□□ 0.92
HDAC11-210ENST00000425430 BRCA1P38398 1863 aaKnown RBP20.79■□□□□ 0.92
HDAC11-210ENST00000425430 FCHSD2O94868 740 aa20.79■□□□□ 0.92
HDAC11-210ENST00000425430 GYS1P13807 737 aa20.79■□□□□ 0.92
HDAC11-210ENST00000425430 ARHGAP27Q6ZUM4 889 aa20.79■□□□□ 0.92
HDAC11-210ENST00000425430 PARP3Q9Y6F1 533 aa20.79■□□□□ 0.92
HDAC11-210ENST00000425430 DPEP1P16444 411 aa20.78■□□□□ 0.92
HDAC11-210ENST00000425430 CABP4P57796 275 aa20.78■□□□□ 0.92
HDAC11-210ENST00000425430 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
HDAC11-210ENST00000425430 RC3H1Q5TC82 1133 aaKnown RBP20.78■□□□□ 0.92
HDAC11-210ENST00000425430 MYH14Q7Z406 1995 aaKnown RBP20.77■□□□□ 0.92
HDAC11-210ENST00000425430 MORC1Q86VD1 984 aa20.77■□□□□ 0.92
HDAC11-210ENST00000425430 RPS6KA4O75676 772 aa20.76■□□□□ 0.91
HDAC11-210ENST00000425430 PTCD1O75127 700 aaKnown RBP20.75■□□□□ 0.91
HDAC11-210ENST00000425430 APLP1P51693 650 aa20.75■□□□□ 0.91
HDAC11-210ENST00000425430 ARFGEF1Q9Y6D6 1849 aa20.75■□□□□ 0.91
HDAC11-210ENST00000425430 MTHFSP49914 203 aa20.74■□□□□ 0.91
HDAC11-210ENST00000425430 TJP1Q07157 1748 aa20.74■□□□□ 0.91
HDAC11-210ENST00000425430 AMOTQ4VCS5 1084 aa20.74■□□□□ 0.91
HDAC11-210ENST00000425430 C1orf141Q5JVX7 400 aa20.74■□□□□ 0.91
HDAC11-210ENST00000425430 NMRK2Q9NPI5 230 aa20.74■□□□□ 0.91
HDAC11-210ENST00000425430 TOMM70O94826 608 aa20.73■□□□□ 0.91
HDAC11-210ENST00000425430 CC2D1BQ5T0F9 858 aaKnown RBP20.73■□□□□ 0.91
HDAC11-210ENST00000425430 AEBP1Q8IUX7 1158 aa20.73■□□□□ 0.91
HDAC11-210ENST00000425430 SRP68Q9UHB9 627 aaKnown RBP20.73■□□□□ 0.91
HDAC11-210ENST00000425430 CRKLP46109 303 aaKnown RBP20.72■□□□□ 0.91
HDAC11-210ENST00000425430 C9orf131Q5VYM1 1079 aa20.71■□□□□ 0.91
HDAC11-210ENST00000425430 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
HDAC11-210ENST00000425430 PIM2Q9P1W9 311 aa20.7■□□□□ 0.9
HDAC11-210ENST00000425430 USP42Q9H9J4 1324 aaKnown RBP20.7■□□□□ 0.9
HDAC11-210ENST00000425430 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
HDAC11-210ENST00000425430 FKBP8Q14318 412 aa20.69■□□□□ 0.9
HDAC11-210ENST00000425430 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
HDAC11-210ENST00000425430 NFATC2IPQ8NCF5 419 aa20.69■□□□□ 0.9
HDAC11-210ENST00000425430 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
HDAC11-210ENST00000425430 KCNA3P22001 575 aa20.68■□□□□ 0.9
HDAC11-210ENST00000425430 DDR1Q08345 913 aa20.68■□□□□ 0.9
HDAC11-210ENST00000425430 DALRD3Q5D0E6 543 aaKnown RBP20.68■□□□□ 0.9
HDAC11-210ENST00000425430 SULT6B1Q6IMI4 303 aa20.68■□□□□ 0.9
HDAC11-210ENST00000425430 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
HDAC11-210ENST00000425430 RNF181Q9P0P0 153 aa20.66■□□□□ 0.9
HDAC11-210ENST00000425430 ADAMTS7Q9UKP4 1686 aa20.65■□□□□ 0.9
HDAC11-210ENST00000425430 NPC1L1Q9UHC9 1359 aa20.65■□□□□ 0.9
HDAC11-210ENST00000425430 CHRNA5P30532 468 aa20.65■□□□□ 0.9
HDAC11-210ENST00000425430 RBM46Q8TBY0 533 aaKnown RBP20.65■□□□□ 0.9
HDAC11-210ENST00000425430 KDM2BQ8NHM5 1336 aa20.64■□□□□ 0.89
HDAC11-210ENST00000425430 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.89
HDAC11-210ENST00000425430 IL13P35225 146 aa20.63■□□□□ 0.89
HDAC11-210ENST00000425430 INTS5Q6P9B9 1019 aaKnown RBP20.63■□□□□ 0.89
HDAC11-210ENST00000425430 DNAJC5GQ8N7S2 189 aa20.63■□□□□ 0.89
HDAC11-210ENST00000425430 POLRMTO00411 1230 aaKnown RBP20.62■□□□□ 0.89
HDAC11-210ENST00000425430 ZPR1O75312 459 aa20.62■□□□□ 0.89
HDAC11-210ENST00000425430 HTRA3P83110 453 aa20.62■□□□□ 0.89
HDAC11-210ENST00000425430 USPL1Q5W0Q7 1092 aa20.62■□□□□ 0.89
HDAC11-210ENST00000425430 DNAJC10Q8IXB1 793 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms