RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 BCS1LQ9Y276 419 aa16.79■□□□□ 0.28
HLA-DQB3-203ENST00000425319 PLEKHG2Q9H7P9 1386 aa16.78■□□□□ 0.28
HLA-DQB3-203ENST00000425319 MTHFSP49914 203 aa16.78■□□□□ 0.28
HLA-DQB3-203ENST00000425319 ARHGAP27Q6ZUM4 889 aa16.78■□□□□ 0.28
HLA-DQB3-203ENST00000425319 EIF4G2P78344 907 aaKnown RBP eCLIP16.77■□□□□ 0.28
HLA-DQB3-203ENST00000425319 EIF4A2Q14240 407 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB3-203ENST00000425319 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB3-203ENST00000425319 COL24A1Q17RW2 1714 aa16.76■□□□□ 0.27
HLA-DQB3-203ENST00000425319 RPS6KA4O75676 772 aa16.76■□□□□ 0.27
HLA-DQB3-203ENST00000425319 FCHSD2O94868 740 aa16.76■□□□□ 0.27
HLA-DQB3-203ENST00000425319 ITPK1Q13572 414 aa16.76■□□□□ 0.27
HLA-DQB3-203ENST00000425319 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB3-203ENST00000425319 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
HLA-DQB3-203ENST00000425319 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB3-203ENST00000425319 CLSPNQ9HAW4 1339 aa16.75■□□□□ 0.27
HLA-DQB3-203ENST00000425319 RGPD2P0DJD1 1756 aa16.75■□□□□ 0.27
HLA-DQB3-203ENST00000425319 SMIM5Q71RC9 77 aa16.75■□□□□ 0.27
HLA-DQB3-203ENST00000425319 C4BP0C0L5 1744 aa16.74■□□□□ 0.27
HLA-DQB3-203ENST00000425319 A0A0G2JLW4 131 aa16.74■□□□□ 0.27
HLA-DQB3-203ENST00000425319 C5P01031 1676 aa16.74■□□□□ 0.27
HLA-DQB3-203ENST00000425319 TOMM70O94826 608 aa16.73■□□□□ 0.27
HLA-DQB3-203ENST00000425319 APLP1P51693 650 aa16.73■□□□□ 0.27
HLA-DQB3-203ENST00000425319 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
HLA-DQB3-203ENST00000425319 PIM2Q9P1W9 311 aa16.73■□□□□ 0.27
HLA-DQB3-203ENST00000425319 KNSTRNQ9Y448 316 aa16.73■□□□□ 0.27
HLA-DQB3-203ENST00000425319 CNTNAP4Q9C0A0 1308 aa16.72■□□□□ 0.27
HLA-DQB3-203ENST00000425319 AMIGO3Q86WK7 504 aa16.72■□□□□ 0.27
HLA-DQB3-203ENST00000425319 PANK3Q9H999 370 aa16.72■□□□□ 0.27
HLA-DQB3-203ENST00000425319 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
HLA-DQB3-203ENST00000425319 SHANK3Q9BYB0 1731 aa16.71■□□□□ 0.27
HLA-DQB3-203ENST00000425319 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB3-203ENST00000425319 ZPR1O75312 459 aa16.71■□□□□ 0.27
HLA-DQB3-203ENST00000425319 NFATC2IPQ8NCF5 419 aa16.7■□□□□ 0.26
HLA-DQB3-203ENST00000425319 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
HLA-DQB3-203ENST00000425319 ADCY9O60503 1353 aa16.69■□□□□ 0.26
HLA-DQB3-203ENST00000425319 KIF20BQ96Q89 1820 aa16.69■□□□□ 0.26
HLA-DQB3-203ENST00000425319 GYS1P13807 737 aa16.69■□□□□ 0.26
HLA-DQB3-203ENST00000425319 DPEP1P16444 411 aa16.69■□□□□ 0.26
HLA-DQB3-203ENST00000425319 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
HLA-DQB3-203ENST00000425319 KDM2BQ8NHM5 1336 aa16.69■□□□□ 0.26
HLA-DQB3-203ENST00000425319 KIF3CO14782 793 aa16.68■□□□□ 0.26
HLA-DQB3-203ENST00000425319 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
HLA-DQB3-203ENST00000425319 CRKLP46109 303 aaKnown RBP16.67■□□□□ 0.26
HLA-DQB3-203ENST00000425319 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
HLA-DQB3-203ENST00000425319 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
HLA-DQB3-203ENST00000425319 PKD1L3Q7Z443 1732 aa16.65■□□□□ 0.26
HLA-DQB3-203ENST00000425319 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
HLA-DQB3-203ENST00000425319 TAF1LQ8IZX4 1826 aa16.64■□□□□ 0.25
HLA-DQB3-203ENST00000425319 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB3-203ENST00000425319 SLC4A9Q96Q91 983 aa16.64■□□□□ 0.25
HLA-DQB3-203ENST00000425319 ITGB4P16144 1822 aa16.63■□□□□ 0.25
HLA-DQB3-203ENST00000425319 RBM46Q8TBY0 533 aaKnown RBP16.63■□□□□ 0.25
HLA-DQB3-203ENST00000425319 PXDNLA1KZ92 1463 aa16.62■□□□□ 0.25
HLA-DQB3-203ENST00000425319 FSTL1Q12841 308 aa16.62■□□□□ 0.25
HLA-DQB3-203ENST00000425319 KDRP35968 1356 aa16.62■□□□□ 0.25
HLA-DQB3-203ENST00000425319 RNF181Q9P0P0 153 aa16.61■□□□□ 0.25
HLA-DQB3-203ENST00000425319 USP42Q9H9J4 1324 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB3-203ENST00000425319 FKBP8Q14318 412 aa16.6■□□□□ 0.25
HLA-DQB3-203ENST00000425319 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
HLA-DQB3-203ENST00000425319 SLC52A2Q9HAB3 445 aa16.6■□□□□ 0.25
HLA-DQB3-203ENST00000425319 MAP2P11137 1827 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB3-203ENST00000425319 UBR3Q6ZT12 1888 aa16.6■□□□□ 0.25
HLA-DQB3-203ENST00000425319 C10orf71Q711Q0 1435 aa16.6■□□□□ 0.25
HLA-DQB3-203ENST00000425319 A0A087WZG4 1122 aa16.59■□□□□ 0.25
HLA-DQB3-203ENST00000425319 STARD3NLO95772 234 aa16.59■□□□□ 0.25
HLA-DQB3-203ENST00000425319 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
HLA-DQB3-203ENST00000425319 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
HLA-DQB3-203ENST00000425319 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB3-203ENST00000425319 NMRK2Q9NPI5 230 aa16.59■□□□□ 0.25
HLA-DQB3-203ENST00000425319 SRP68Q9UHB9 627 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB3-203ENST00000425319 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
HLA-DQB3-203ENST00000425319 KCNA3P22001 575 aa16.58■□□□□ 0.24
HLA-DQB3-203ENST00000425319 TM4SF1P30408 202 aa16.58■□□□□ 0.24
HLA-DQB3-203ENST00000425319 IL13P35225 146 aa16.58■□□□□ 0.24
HLA-DQB3-203ENST00000425319 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQB3-203ENST00000425319 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
HLA-DQB3-203ENST00000425319 CICQ96RK0 1608 aaPredicted RBP16.58■□□□□ 0.24
HLA-DQB3-203ENST00000425319 UTRNP46939 3433 aa16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 H0YIN7 160 aa16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 NPHP1O15259 732 aa16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 DPY19L2Q6NUT2 758 aa16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 INTS5Q6P9B9 1019 aaKnown RBP16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 DNAJC10Q8IXB1 793 aa16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 VSIG10Q8N0Z9 540 aa16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 RRAGCQ9HB90 399 aa16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 NARFQ9UHQ1 456 aa16.57■□□□□ 0.24
HLA-DQB3-203ENST00000425319 POLRMTO00411 1230 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB3-203ENST00000425319 RNMTO43148 476 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB3-203ENST00000425319 DIAPH1O60610 1272 aaKnown RBP16.56■□□□□ 0.24
HLA-DQB3-203ENST00000425319 TTLL6Q8N841 843 aa16.56■□□□□ 0.24
HLA-DQB3-203ENST00000425319 SMC1BQ8NDV3 1235 aa16.56■□□□□ 0.24
HLA-DQB3-203ENST00000425319 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
HLA-DQB3-203ENST00000425319 SERPINB2P05120 415 aa16.55■□□□□ 0.24
HLA-DQB3-203ENST00000425319 CHRNA5P30532 468 aa16.55■□□□□ 0.24
HLA-DQB3-203ENST00000425319 KDM6AO15550 1401 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB3-203ENST00000425319 CYP19A1P11511 503 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB3-203ENST00000425319 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB3-203ENST00000425319 LMNB1P20700 586 aa16.54■□□□□ 0.24
HLA-DQB3-203ENST00000425319 DDR1Q08345 913 aa16.54■□□□□ 0.24
HLA-DQB3-203ENST00000425319 TEFQ10587 303 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms