RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SUPT16HQ9Y5B9 1047 aaKnown RBP13.33□□□□□ -0.28
MDC1-205ENST00000425072 FANCIQ9NVI1 1328 aa13.33□□□□□ -0.28
MDC1-205ENST00000425072 LRP6O75581 1613 aa13.32□□□□□ -0.28
MDC1-205ENST00000425072 ONECUT3O60422 494 aaPredicted RBP13.32□□□□□ -0.28
MDC1-205ENST00000425072 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.32□□□□□ -0.28
MDC1-205ENST00000425072 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
MDC1-205ENST00000425072 NRAPQ86VF7 1730 aa13.31□□□□□ -0.28
MDC1-205ENST00000425072 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
MDC1-205ENST00000425072 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
MDC1-205ENST00000425072 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
MDC1-205ENST00000425072 KAT6BQ8WYB5 2073 aa13.3□□□□□ -0.28
MDC1-205ENST00000425072 NEFLP07196 543 aa13.3□□□□□ -0.28
MDC1-205ENST00000425072 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
MDC1-205ENST00000425072 PKD1L3Q7Z443 1732 aa13.3□□□□□ -0.28
MDC1-205ENST00000425072 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
MDC1-205ENST00000425072 VAMP4O75379 141 aa13.29□□□□□ -0.28
MDC1-205ENST00000425072 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
MDC1-205ENST00000425072 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
MDC1-205ENST00000425072 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.29□□□□□ -0.28
MDC1-205ENST00000425072 A0A0G2JS52 829 aa13.28□□□□□ -0.28
MDC1-205ENST00000425072 MYT1Q01538 1121 aa13.28□□□□□ -0.28
MDC1-205ENST00000425072 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.28
MDC1-205ENST00000425072 MS4A1P11836 297 aa13.27□□□□□ -0.29
MDC1-205ENST00000425072 RARSP54136 660 aaKnown RBP13.27□□□□□ -0.29
MDC1-205ENST00000425072 RBM6P78332 1123 aaKnown RBP13.27□□□□□ -0.29
MDC1-205ENST00000425072 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
MDC1-205ENST00000425072 C8orf58Q8NAV2 365 aa13.27□□□□□ -0.29
MDC1-205ENST00000425072 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
MDC1-205ENST00000425072 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
MDC1-205ENST00000425072 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
MDC1-205ENST00000425072 ATRNO75882 1429 aa13.26□□□□□ -0.29
MDC1-205ENST00000425072 HOXB7P09629 217 aa13.26□□□□□ -0.29
MDC1-205ENST00000425072 EIF4A1P60842 406 aaKnown RBP13.26□□□□□ -0.29
MDC1-205ENST00000425072 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
MDC1-205ENST00000425072 ZNF790Q6PG37 636 aa13.26□□□□□ -0.29
MDC1-205ENST00000425072 TMOD3Q9NYL9 352 aa13.26□□□□□ -0.29
MDC1-205ENST00000425072 RNF123Q5XPI4 1314 aa13.25□□□□□ -0.29
MDC1-205ENST00000425072 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
MDC1-205ENST00000425072 BRPF1P55201 1214 aaPredicted RBP13.24□□□□□ -0.29
MDC1-205ENST00000425072 CCDC30Q5VVM6 783 aa13.24□□□□□ -0.29
MDC1-205ENST00000425072 ERICH6BQ5W0A0 696 aa13.24□□□□□ -0.29
MDC1-205ENST00000425072 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
MDC1-205ENST00000425072 TSPYL6Q8N831 410 aa13.24□□□□□ -0.29
MDC1-205ENST00000425072 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
MDC1-205ENST00000425072 ADAMTS7Q9UKP4 1686 aa13.24□□□□□ -0.29
MDC1-205ENST00000425072 KDM6AO15550 1401 aaPredicted RBP13.23□□□□□ -0.29
MDC1-205ENST00000425072 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
MDC1-205ENST00000425072 RXRBP28702 533 aa13.23□□□□□ -0.29
MDC1-205ENST00000425072 IFFO2Q5TF58 517 aa13.23□□□□□ -0.29
MDC1-205ENST00000425072 STK31Q9BXU1 1019 aa13.23□□□□□ -0.29
MDC1-205ENST00000425072 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
MDC1-205ENST00000425072 GIGYF1O75420 1035 aaPredicted RBP13.22□□□□□ -0.29
MDC1-205ENST00000425072 BCAR3O75815 825 aa13.22□□□□□ -0.29
MDC1-205ENST00000425072 SNRPA1P09661 255 aaKnown RBP13.22□□□□□ -0.29
MDC1-205ENST00000425072 CANXP27824 592 aaKnown RBP13.22□□□□□ -0.29
MDC1-205ENST00000425072 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
MDC1-205ENST00000425072 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
MDC1-205ENST00000425072 SSH1Q8WYL5 1049 aa13.22□□□□□ -0.29
MDC1-205ENST00000425072 ARHGAP45Q92619 1136 aa13.22□□□□□ -0.29
MDC1-205ENST00000425072 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
MDC1-205ENST00000425072 WNK3Q9BYP7 1800 aa13.21□□□□□ -0.29
MDC1-205ENST00000425072 KCNQ3O43525 872 aa13.21□□□□□ -0.29
MDC1-205ENST00000425072 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
MDC1-205ENST00000425072 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
MDC1-205ENST00000425072 PIGBQ92521 554 aa13.21□□□□□ -0.29
MDC1-205ENST00000425072 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
MDC1-205ENST00000425072 CACNA1FO60840 1977 aa13.21□□□□□ -0.29
MDC1-205ENST00000425072 LRRC37A3O60309 1634 aa13.21□□□□□ -0.3
MDC1-205ENST00000425072 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
MDC1-205ENST00000425072 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
MDC1-205ENST00000425072 MRPL50Q8N5N7 158 aaKnown RBP13.2□□□□□ -0.3
MDC1-205ENST00000425072 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
MDC1-205ENST00000425072 SMARCC1Q92922 1105 aaPredicted RBP13.2□□□□□ -0.3
MDC1-205ENST00000425072 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
MDC1-205ENST00000425072 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
MDC1-205ENST00000425072 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
MDC1-205ENST00000425072 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
MDC1-205ENST00000425072 KRT24Q2M2I5 525 aa13.19□□□□□ -0.3
MDC1-205ENST00000425072 HDGFL1Q5TGJ6 251 aa13.19□□□□□ -0.3
MDC1-205ENST00000425072 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
MDC1-205ENST00000425072 KRT27Q7Z3Y8 459 aa13.19□□□□□ -0.3
MDC1-205ENST00000425072 ZNF496Q96IT1 587 aaPredicted RBP13.19□□□□□ -0.3
MDC1-205ENST00000425072 SIPA1L3O60292 1781 aaPredicted RBP13.19□□□□□ -0.3
MDC1-205ENST00000425072 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
MDC1-205ENST00000425072 MRC1P22897 1456 aa13.18□□□□□ -0.3
MDC1-205ENST00000425072 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
MDC1-205ENST00000425072 FKBP8Q14318 412 aa13.18□□□□□ -0.3
MDC1-205ENST00000425072 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
MDC1-205ENST00000425072 DBF4Q9UBU7 674 aaPredicted RBP13.18□□□□□ -0.3
MDC1-205ENST00000425072 NOB1Q9ULX3 412 aaKnown RBP13.18□□□□□ -0.3
MDC1-205ENST00000425072 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
MDC1-205ENST00000425072 GLI3P10071 1580 aa13.17□□□□□ -0.3
MDC1-205ENST00000425072 BCL9O00512 1426 aa13.17□□□□□ -0.3
MDC1-205ENST00000425072 PLIN1O60240 522 aa13.17□□□□□ -0.3
MDC1-205ENST00000425072 ACSBG1Q96GR2 724 aa13.17□□□□□ -0.3
MDC1-205ENST00000425072 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
MDC1-205ENST00000425072 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
MDC1-205ENST00000425072 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
MDC1-205ENST00000425072 PTPRCP08575 1304 aa13.16□□□□□ -0.3
MDC1-205ENST00000425072 ITGB4P16144 1822 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms