RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 AEBP1Q8IUX7 1158 aa17.8■□□□□ 0.44
VRK3-203ENST00000424804 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
VRK3-203ENST00000424804 PHF14O94880 888 aa17.79■□□□□ 0.44
VRK3-203ENST00000424804 ATP6V1AP38606 617 aa17.79■□□□□ 0.44
VRK3-203ENST00000424804 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
VRK3-203ENST00000424804 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
VRK3-203ENST00000424804 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
VRK3-203ENST00000424804 IL13P35225 146 aa17.78■□□□□ 0.44
VRK3-203ENST00000424804 MORC1Q86VD1 984 aa17.77■□□□□ 0.44
VRK3-203ENST00000424804 DCAF5Q96JK2 942 aa17.77■□□□□ 0.44
VRK3-203ENST00000424804 COL5A3P25940 1745 aaPredicted RBP17.77■□□□□ 0.44
VRK3-203ENST00000424804 GRIN3BO60391 1043 aa17.76■□□□□ 0.43
VRK3-203ENST00000424804 PLEKHO1Q53GL0 409 aaPredicted RBP17.76■□□□□ 0.43
VRK3-203ENST00000424804 GNPATO15228 680 aa17.75■□□□□ 0.43
VRK3-203ENST00000424804 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
VRK3-203ENST00000424804 C1QTNF8P60827 252 aa17.75■□□□□ 0.43
VRK3-203ENST00000424804 KIAA1551Q9HCM1 1747 aa17.75■□□□□ 0.43
VRK3-203ENST00000424804 KIF7Q2M1P5 1343 aa17.74■□□□□ 0.43
VRK3-203ENST00000424804 AMOTQ4VCS5 1084 aa17.74■□□□□ 0.43
VRK3-203ENST00000424804 RC3H1Q5TC82 1133 aaKnown RBP17.74■□□□□ 0.43
VRK3-203ENST00000424804 ZNF530Q6P9A1 599 aaPredicted RBP17.74■□□□□ 0.43
VRK3-203ENST00000424804 KIF13BQ9NQT8 1826 aa17.74■□□□□ 0.43
VRK3-203ENST00000424804 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
VRK3-203ENST00000424804 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
VRK3-203ENST00000424804 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
VRK3-203ENST00000424804 SCN11AQ9UI33 1791 aa17.72■□□□□ 0.43
VRK3-203ENST00000424804 NFATC2IPQ8NCF5 419 aa17.71■□□□□ 0.43
VRK3-203ENST00000424804 ARHGEF1Q92888 912 aaKnown RBP17.71■□□□□ 0.43
VRK3-203ENST00000424804 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
VRK3-203ENST00000424804 CNTNAP4Q9C0A0 1308 aa17.71■□□□□ 0.42
VRK3-203ENST00000424804 RPS6KA4O75676 772 aa17.7■□□□□ 0.42
VRK3-203ENST00000424804 MTHFSP49914 203 aa17.7■□□□□ 0.42
VRK3-203ENST00000424804 CABP4P57796 275 aa17.7■□□□□ 0.42
VRK3-203ENST00000424804 TJP1Q07157 1748 aa17.69■□□□□ 0.42
VRK3-203ENST00000424804 CICQ96RK0 1608 aaPredicted RBP17.69■□□□□ 0.42
VRK3-203ENST00000424804 ADCY9O60503 1353 aa17.69■□□□□ 0.42
VRK3-203ENST00000424804 MMP10P09238 476 aa17.69■□□□□ 0.42
VRK3-203ENST00000424804 GYS1P13807 737 aa17.69■□□□□ 0.42
VRK3-203ENST00000424804 TRAPPC3LQ5T215 181 aa17.69■□□□□ 0.42
VRK3-203ENST00000424804 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
VRK3-203ENST00000424804 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
VRK3-203ENST00000424804 ADAMTS7Q9UKP4 1686 aa17.68■□□□□ 0.42
VRK3-203ENST00000424804 LGR6Q9HBX8 967 aa17.68■□□□□ 0.42
VRK3-203ENST00000424804 N4BP2Q86UW6 1770 aaPredicted RBP17.67■□□□□ 0.42
VRK3-203ENST00000424804 WWC3Q9ULE0 1092 aa17.67■□□□□ 0.42
VRK3-203ENST00000424804 PXDNLA1KZ92 1463 aa17.67■□□□□ 0.42
VRK3-203ENST00000424804 VIRMAQ69YN4 1812 aaKnown RBP17.67■□□□□ 0.42
VRK3-203ENST00000424804 ATP10DQ9P241 1426 aa17.66■□□□□ 0.42
VRK3-203ENST00000424804 PTCD1O75127 700 aaKnown RBP17.66■□□□□ 0.42
VRK3-203ENST00000424804 ADRA2BP18089 450 aa17.66■□□□□ 0.42
VRK3-203ENST00000424804 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
VRK3-203ENST00000424804 AKAP4Q5JQC9 854 aa17.65■□□□□ 0.42
VRK3-203ENST00000424804 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
VRK3-203ENST00000424804 INTS5Q6P9B9 1019 aaKnown RBP17.65■□□□□ 0.42
VRK3-203ENST00000424804 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.42
VRK3-203ENST00000424804 GIGYF1O75420 1035 aaPredicted RBP17.64■□□□□ 0.41
VRK3-203ENST00000424804 CRKLP46109 303 aaKnown RBP17.64■□□□□ 0.41
VRK3-203ENST00000424804 BRCA1P38398 1863 aaKnown RBP17.64■□□□□ 0.41
VRK3-203ENST00000424804 MRC1P22897 1456 aa17.63■□□□□ 0.41
VRK3-203ENST00000424804 RNMTO43148 476 aaKnown RBP17.63■□□□□ 0.41
VRK3-203ENST00000424804 HMOX1P09601 288 aa17.63■□□□□ 0.41
VRK3-203ENST00000424804 KCNA3P22001 575 aa17.63■□□□□ 0.41
VRK3-203ENST00000424804 SLC52A2Q9HAB3 445 aa17.63■□□□□ 0.41
VRK3-203ENST00000424804 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
VRK3-203ENST00000424804 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
VRK3-203ENST00000424804 A0A0G2JLW4 131 aa17.62■□□□□ 0.41
VRK3-203ENST00000424804 TGFB2P61812 414 aa17.62■□□□□ 0.41
VRK3-203ENST00000424804 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
VRK3-203ENST00000424804 SRP68Q9UHB9 627 aaKnown RBP17.62■□□□□ 0.41
VRK3-203ENST00000424804 CEP350Q5VT06 3117 aa17.61■□□□□ 0.41
VRK3-203ENST00000424804 RFC4P35249 363 aa17.61■□□□□ 0.41
VRK3-203ENST00000424804 FKBP8Q14318 412 aa17.61■□□□□ 0.41
VRK3-203ENST00000424804 CC2D1BQ5T0F9 858 aaKnown RBP17.61■□□□□ 0.41
VRK3-203ENST00000424804 NPC1L1Q9UHC9 1359 aa17.61■□□□□ 0.41
VRK3-203ENST00000424804 KCPQ6ZWJ8 1503 aa17.61■□□□□ 0.41
VRK3-203ENST00000424804 DDR1Q08345 913 aa17.6■□□□□ 0.41
VRK3-203ENST00000424804 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
VRK3-203ENST00000424804 DNAJC10Q8IXB1 793 aa17.6■□□□□ 0.41
VRK3-203ENST00000424804 USP42Q9H9J4 1324 aaKnown RBP17.6■□□□□ 0.41
VRK3-203ENST00000424804 CYP19A1P11511 503 aaPredicted RBP17.59■□□□□ 0.41
VRK3-203ENST00000424804 DPEP1P16444 411 aa17.59■□□□□ 0.41
VRK3-203ENST00000424804 TM4SF1P30408 202 aa17.59■□□□□ 0.41
VRK3-203ENST00000424804 DIAPH1O60610 1272 aaKnown RBP17.58■□□□□ 0.4
VRK3-203ENST00000424804 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
VRK3-203ENST00000424804 CCDC87Q9NVE4 849 aa17.57■□□□□ 0.4
VRK3-203ENST00000424804 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
VRK3-203ENST00000424804 SOS1Q07889 1333 aaPredicted RBP17.56■□□□□ 0.4
VRK3-203ENST00000424804 PARP3Q9Y6F1 533 aa17.56■□□□□ 0.4
VRK3-203ENST00000424804 POLRMTO00411 1230 aaKnown RBP17.55■□□□□ 0.4
VRK3-203ENST00000424804 KIF3CO14782 793 aa17.55■□□□□ 0.4
VRK3-203ENST00000424804 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
VRK3-203ENST00000424804 BCL2L12Q9HB09 334 aa17.55■□□□□ 0.4
VRK3-203ENST00000424804 GPBP1L1Q9HC44 474 aaPredicted RBP17.55■□□□□ 0.4
VRK3-203ENST00000424804 ARFGEF1Q9Y6D6 1849 aa17.55■□□□□ 0.4
VRK3-203ENST00000424804 SIPA1L3O60292 1781 aaPredicted RBP17.54■□□□□ 0.4
VRK3-203ENST00000424804 ZNF526Q8TF50 670 aaPredicted RBP17.54■□□□□ 0.4
VRK3-203ENST00000424804 BCS1LQ9Y276 419 aa17.54■□□□□ 0.4
VRK3-203ENST00000424804 AFDNP55196 1824 aaKnown RBP17.54■□□□□ 0.4
VRK3-203ENST00000424804 USPL1Q5W0Q7 1092 aa17.53■□□□□ 0.4
VRK3-203ENST00000424804 VSIG10Q8N0Z9 540 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms