RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 CSB-PGBD3P0DP91 1061 aa11.33□□□□□ -0.6
SNX20-203ENST00000423026 LGR6Q9HBX8 967 aa11.33□□□□□ -0.6
SNX20-203ENST00000423026 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
SNX20-203ENST00000423026 CCT4P50991 539 aaKnown RBP11.33□□□□□ -0.6
SNX20-203ENST00000423026 CABLES1Q8TDN4 633 aa11.33□□□□□ -0.6
SNX20-203ENST00000423026 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
SNX20-203ENST00000423026 VIRMAQ69YN4 1812 aaKnown RBP11.32□□□□□ -0.6
SNX20-203ENST00000423026 RNMTO43148 476 aaKnown RBP11.32□□□□□ -0.6
SNX20-203ENST00000423026 TATP17735 454 aaPredicted RBP11.32□□□□□ -0.6
SNX20-203ENST00000423026 MPRIPQ6WCQ1 1025 aa11.32□□□□□ -0.6
SNX20-203ENST00000423026 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
SNX20-203ENST00000423026 ABCC6O95255 1503 aa11.32□□□□□ -0.6
SNX20-203ENST00000423026 BTBD11A6QL63 1104 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 NUCB1Q02818 461 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 OVOS2A0A0G2JMS6 1433 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 RGS12O14924 1447 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 HOXB7P09629 217 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 HDGFL1Q5TGJ6 251 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 SLC4A10Q6U841 1118 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 SPG7Q9UQ90 795 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 CPDO75976 1380 aa11.31□□□□□ -0.6
SNX20-203ENST00000423026 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
SNX20-203ENST00000423026 EIF4A1P60842 406 aaKnown RBP11.3□□□□□ -0.6
SNX20-203ENST00000423026 FLIIQ13045 1269 aa11.3□□□□□ -0.6
SNX20-203ENST00000423026 FKBP5Q13451 457 aaPredicted RBP11.3□□□□□ -0.6
SNX20-203ENST00000423026 G2E3Q7L622 706 aa11.3□□□□□ -0.6
SNX20-203ENST00000423026 RPAP2Q8IXW5 612 aaPredicted RBP11.3□□□□□ -0.6
SNX20-203ENST00000423026 NECTIN2Q92692 538 aa11.3□□□□□ -0.6
SNX20-203ENST00000423026 COL18A1P39060 1754 aa11.3□□□□□ -0.6
SNX20-203ENST00000423026 KDM3BQ7LBC6 1761 aa11.3□□□□□ -0.6
SNX20-203ENST00000423026 CHRNA2Q15822 529 aa11.3□□□□□ -0.6
SNX20-203ENST00000423026 ANKRD45Q5TZF3 282 aa11.3□□□□□ -0.6
SNX20-203ENST00000423026 CHD1LQ86WJ1 897 aa11.3□□□□□ -0.6
SNX20-203ENST00000423026 SOS2Q07890 1332 aaPredicted RBP11.29□□□□□ -0.6
SNX20-203ENST00000423026 CERKQ8TCT0 537 aa11.29□□□□□ -0.6
SNX20-203ENST00000423026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNX20-203ENST00000423026 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
SNX20-203ENST00000423026 LNPKQ9C0E8 428 aa11.28□□□□□ -0.6
SNX20-203ENST00000423026 UPF2Q9HAU5 1272 aaKnown RBP11.28□□□□□ -0.6
SNX20-203ENST00000423026 CRYBG1Q9Y4K1 1723 aa11.28□□□□□ -0.6
SNX20-203ENST00000423026 F6X3S4 739 aa11.28□□□□□ -0.6
SNX20-203ENST00000423026 EIF2S2P20042 333 aaKnown RBP11.28□□□□□ -0.6
SNX20-203ENST00000423026 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
SNX20-203ENST00000423026 ANKRD44Q8N8A2 993 aa11.28□□□□□ -0.6
SNX20-203ENST00000423026 IFNL2Q8IZJ0 200 aa11.27□□□□□ -0.6
SNX20-203ENST00000423026 PRDM11Q9NQV5 511 aa11.27□□□□□ -0.6
SNX20-203ENST00000423026 HMMRO75330 724 aa11.27□□□□□ -0.61
SNX20-203ENST00000423026 GNAI3P08754 354 aa11.27□□□□□ -0.61
SNX20-203ENST00000423026 MEIS3Q99687 375 aa11.27□□□□□ -0.61
SNX20-203ENST00000423026 DCTPP1Q9H773 170 aa11.27□□□□□ -0.61
SNX20-203ENST00000423026 CEP85Q6P2H3 762 aa11.26□□□□□ -0.61
SNX20-203ENST00000423026 DAXXQ9UER7 740 aaPredicted RBP11.26□□□□□ -0.61
SNX20-203ENST00000423026 KCNQ3O43525 872 aa11.26□□□□□ -0.61
SNX20-203ENST00000423026 GNAI2P04899 355 aa11.26□□□□□ -0.61
SNX20-203ENST00000423026 HSP90AB1P08238 724 aaKnown RBP11.26□□□□□ -0.61
SNX20-203ENST00000423026 PHKG2P15735 406 aa11.26□□□□□ -0.61
SNX20-203ENST00000423026 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
SNX20-203ENST00000423026 DBF4Q9UBU7 674 aaPredicted RBP11.25□□□□□ -0.61
SNX20-203ENST00000423026 PXDNLA1KZ92 1463 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 SIPA1L3O60292 1781 aaPredicted RBP11.24□□□□□ -0.61
SNX20-203ENST00000423026 SCN11AQ9UI33 1791 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 MEGF6O75095 1541 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
SNX20-203ENST00000423026 TOM1L2Q6ZVM7 507 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 PHAXQ9H814 394 aaKnown RBP11.24□□□□□ -0.61
SNX20-203ENST00000423026 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 CHPF2Q9P2E5 772 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 WDR17Q8IZU2 1322 aa11.24□□□□□ -0.61
SNX20-203ENST00000423026 PKNOX2Q96KN3 472 aa11.23□□□□□ -0.61
SNX20-203ENST00000423026 SEC24BO95487 1268 aa11.23□□□□□ -0.61
SNX20-203ENST00000423026 N4BP2Q86UW6 1770 aaPredicted RBP11.22□□□□□ -0.61
SNX20-203ENST00000423026 EVA1CP58658 441 aa11.22□□□□□ -0.61
SNX20-203ENST00000423026 BMP2KLQ5H9B9 411 aa11.22□□□□□ -0.61
SNX20-203ENST00000423026 SRCIN1Q9C0H9 1055 aa11.22□□□□□ -0.61
SNX20-203ENST00000423026 HEG1Q9ULI3 1381 aa11.22□□□□□ -0.61
SNX20-203ENST00000423026 NHSL1Q5SYE7 1610 aa11.22□□□□□ -0.61
SNX20-203ENST00000423026 GSE1Q14687 1217 aa11.21□□□□□ -0.61
SNX20-203ENST00000423026 ZNF790Q6PG37 636 aa11.21□□□□□ -0.61
SNX20-203ENST00000423026 NFATC2IPQ8NCF5 419 aa11.21□□□□□ -0.61
SNX20-203ENST00000423026 DNAAF4Q8WXU2 420 aa11.21□□□□□ -0.61
SNX20-203ENST00000423026 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.61
SNX20-203ENST00000423026 KDM6AO15550 1401 aaPredicted RBP11.21□□□□□ -0.62
SNX20-203ENST00000423026 UBTFL1P0CB47 393 aaPredicted RBP11.21□□□□□ -0.62
SNX20-203ENST00000423026 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.62
SNX20-203ENST00000423026 HYPKQ9NX55 129 aa11.21□□□□□ -0.62
SNX20-203ENST00000423026 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
SNX20-203ENST00000423026 CYP27B1O15528 508 aa11.2□□□□□ -0.62
SNX20-203ENST00000423026 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
SNX20-203ENST00000423026 ZCRB1Q8TBF4 217 aaKnown RBP11.2□□□□□ -0.62
SNX20-203ENST00000423026 PARP4Q9UKK3 1724 aaKnown RBP11.2□□□□□ -0.62
SNX20-203ENST00000423026 DDX58O95786 925 aaKnown RBP11.2□□□□□ -0.62
SNX20-203ENST00000423026 CABP4P57796 275 aa11.2□□□□□ -0.62
SNX20-203ENST00000423026 ATP8B2P98198 1209 aa11.2□□□□□ -0.62
SNX20-203ENST00000423026 CARD10Q9BWT7 1032 aa11.2□□□□□ -0.62
SNX20-203ENST00000423026 USP44Q9H0E7 712 aa11.2□□□□□ -0.62
SNX20-203ENST00000423026 ABCA3Q99758 1704 aa11.2□□□□□ -0.62
SNX20-203ENST00000423026 COL5A2P05997 1499 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms