RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 ABCA3Q99758 1704 aa28.96■■■□□ 2.23
LSM8-203ENST00000422760 NLRP2Q9NX02 1062 aa28.96■■■□□ 2.23
LSM8-203ENST00000422760 NHSL1Q5SYE7 1610 aa28.96■■■□□ 2.23
LSM8-203ENST00000422760 INTS3Q68E01 1043 aaKnown RBP28.95■■■□□ 2.23
LSM8-203ENST00000422760 ADAMTS7Q9UKP4 1686 aa28.94■■■□□ 2.22
LSM8-203ENST00000422760 MPRIPQ6WCQ1 1025 aa28.94■■■□□ 2.22
LSM8-203ENST00000422760 NFKBIBQ15653 356 aa28.94■■■□□ 2.22
LSM8-203ENST00000422760 STK31Q9BXU1 1019 aa28.93■■■□□ 2.22
LSM8-203ENST00000422760 C1orf115Q9H7X2 142 aa28.93■■■□□ 2.22
LSM8-203ENST00000422760 SIPA1L3O60292 1781 aaPredicted RBP28.93■■■□□ 2.22
LSM8-203ENST00000422760 SMC5Q8IY18 1101 aa28.92■■■□□ 2.22
LSM8-203ENST00000422760 MEGF6O75095 1541 aa28.92■■■□□ 2.22
LSM8-203ENST00000422760 TEFQ10587 303 aa28.92■■■□□ 2.22
LSM8-203ENST00000422760 CCDC30Q5VVM6 783 aa28.92■■■□□ 2.22
LSM8-203ENST00000422760 G2E3Q7L622 706 aa28.92■■■□□ 2.22
LSM8-203ENST00000422760 RAPGEF4Q8WZA2 1011 aa28.91■■■□□ 2.22
LSM8-203ENST00000422760 RNMTO43148 476 aaKnown RBP28.9■■■□□ 2.22
LSM8-203ENST00000422760 CSB-PGBD3P0DP91 1061 aa28.9■■■□□ 2.22
LSM8-203ENST00000422760 TBC1D32Q96NH3 1257 aa28.89■■■□□ 2.22
LSM8-203ENST00000422760 EIF4A1P60842 406 aaKnown RBP28.87■■■□□ 2.21
LSM8-203ENST00000422760 NECTIN2Q92692 538 aa28.87■■■□□ 2.21
LSM8-203ENST00000422760 SCN11AQ9UI33 1791 aa28.87■■■□□ 2.21
LSM8-203ENST00000422760 BTBD11A6QL63 1104 aa28.86■■■□□ 2.21
LSM8-203ENST00000422760 PKD1L3Q7Z443 1732 aa28.86■■■□□ 2.21
LSM8-203ENST00000422760 TATP17735 454 aaPredicted RBP28.86■■■□□ 2.21
LSM8-203ENST00000422760 PLEKHG2Q9H7P9 1386 aa28.85■■■□□ 2.21
LSM8-203ENST00000422760 N4BP2Q86UW6 1770 aaPredicted RBP28.85■■■□□ 2.21
LSM8-203ENST00000422760 SLC4A3P48751 1232 aa28.84■■■□□ 2.21
LSM8-203ENST00000422760 FLIIQ13045 1269 aa28.84■■■□□ 2.21
LSM8-203ENST00000422760 HDGFL1Q5TGJ6 251 aa28.84■■■□□ 2.21
LSM8-203ENST00000422760 PRDM11Q9NQV5 511 aa28.84■■■□□ 2.21
LSM8-203ENST00000422760 KCNQ3O43525 872 aa28.84■■■□□ 2.21
LSM8-203ENST00000422760 F6X3S4 739 aa28.83■■■□□ 2.21
LSM8-203ENST00000422760 SIRT2Q8IXJ6 389 aa28.83■■■□□ 2.21
LSM8-203ENST00000422760 HOXB7P09629 217 aa28.82■■■□□ 2.2
LSM8-203ENST00000422760 ATP10DQ9P241 1426 aa28.82■■■□□ 2.2
LSM8-203ENST00000422760 KDM6AO15550 1401 aaPredicted RBP28.82■■■□□ 2.2
LSM8-203ENST00000422760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.82■■■□□ 2.24e-7■□□□□ 9.1
LSM8-203ENST00000422760 SEC24BO95487 1268 aa28.81■■■□□ 2.2
LSM8-203ENST00000422760 SPG7Q9UQ90 795 aa28.81■■■□□ 2.2
LSM8-203ENST00000422760 GSE1Q14687 1217 aa28.81■■■□□ 2.2
LSM8-203ENST00000422760 SLC4A10Q6U841 1118 aa28.81■■■□□ 2.2
LSM8-203ENST00000422760 FKBP5Q13451 457 aaPredicted RBP28.8■■■□□ 2.2
LSM8-203ENST00000422760 COL5A2P05997 1499 aaPredicted RBP28.8■■■□□ 2.2
LSM8-203ENST00000422760 CCT4P50991 539 aaKnown RBP28.79■■■□□ 2.2
LSM8-203ENST00000422760 NUCB1Q02818 461 aa28.79■■■□□ 2.2
LSM8-203ENST00000422760 GCC1Q96CN9 775 aa28.79■■■□□ 2.2
LSM8-203ENST00000422760 PARP4Q9UKK3 1724 aaKnown RBP28.79■■■□□ 2.2
LSM8-203ENST00000422760 MEIS3Q99687 375 aa28.79■■■□□ 2.2
LSM8-203ENST00000422760 PHKG2P15735 406 aa28.78■■■□□ 2.2
LSM8-203ENST00000422760 WDR17Q8IZU2 1322 aa28.78■■■□□ 2.2
LSM8-203ENST00000422760 PXDNLA1KZ92 1463 aa28.78■■■□□ 2.2
LSM8-203ENST00000422760 EIF2S2P20042 333 aaKnown RBP28.76■■■□□ 2.19
LSM8-203ENST00000422760 EIF5BO60841 1220 aaKnown RBP28.75■■■□□ 2.19
LSM8-203ENST00000422760 CHD1LQ86WJ1 897 aa28.75■■■□□ 2.19
LSM8-203ENST00000422760 HEG1Q9ULI3 1381 aa28.74■■■□□ 2.19
LSM8-203ENST00000422760 ROBO1Q9Y6N7 1651 aa28.74■■■□□ 2.19
LSM8-203ENST00000422760 MRC1P22897 1456 aa28.74■■■□□ 2.19
LSM8-203ENST00000422760 IFNL2Q8IZJ0 200 aa28.74■■■□□ 2.19
LSM8-203ENST00000422760 CHMP4AQ9BY43 222 aa28.73■■■□□ 2.19
LSM8-203ENST00000422760 LNPKQ9C0E8 428 aa28.73■■■□□ 2.19
LSM8-203ENST00000422760 ANKRD44Q8N8A2 993 aa28.73■■■□□ 2.19
LSM8-203ENST00000422760 PHAXQ9H814 394 aaKnown RBP28.73■■■□□ 2.19
LSM8-203ENST00000422760 CHPF2Q9P2E5 772 aa28.73■■■□□ 2.19
LSM8-203ENST00000422760 CEP85Q6P2H3 762 aa28.72■■■□□ 2.19
LSM8-203ENST00000422760 CYP27B1O15528 508 aa28.71■■■□□ 2.19
LSM8-203ENST00000422760 SLC52A2Q9HAB3 445 aa28.71■■■□□ 2.19
LSM8-203ENST00000422760 TOM1L2Q6ZVM7 507 aa28.71■■■□□ 2.19
LSM8-203ENST00000422760 RPAP2Q8IXW5 612 aaPredicted RBP28.71■■■□□ 2.19
LSM8-203ENST00000422760 GIGYF1O75420 1035 aaPredicted RBP28.7■■■□□ 2.18
LSM8-203ENST00000422760 ANKRD45Q5TZF3 282 aa28.69■■■□□ 2.18
LSM8-203ENST00000422760 LTBP4Q8N2S1 1624 aa28.69■■■□□ 2.18
LSM8-203ENST00000422760 C5P01031 1676 aa28.68■■■□□ 2.18
LSM8-203ENST00000422760 DCAF5Q96JK2 942 aa28.68■■■□□ 2.18
LSM8-203ENST00000422760 C22orf23Q9BZE7 217 aa28.68■■■□□ 2.18
LSM8-203ENST00000422760 AHDC1Q5TGY3 1603 aaPredicted RBP28.67■■■□□ 2.18
LSM8-203ENST00000422760 DCTPP1Q9H773 170 aa28.66■■■□□ 2.18
LSM8-203ENST00000422760 BMP2KLQ5H9B9 411 aa28.65■■■□□ 2.18
LSM8-203ENST00000422760 ZNF790Q6PG37 636 aa28.65■■■□□ 2.18
LSM8-203ENST00000422760 NFATC2IPQ8NCF5 419 aa28.65■■■□□ 2.18
LSM8-203ENST00000422760 ANTXR1Q9H6X2 564 aa28.65■■■□□ 2.18
LSM8-203ENST00000422760 PRAMEF22A3QJZ6 481 aa28.65■■■□□ 2.18
LSM8-203ENST00000422760 DBF4Q9UBU7 674 aaPredicted RBP28.65■■■□□ 2.18
LSM8-203ENST00000422760 FRAT2O75474 233 aaPredicted RBP28.64■■■□□ 2.18
LSM8-203ENST00000422760 ANXA1P04083 346 aa28.64■■■□□ 2.18
LSM8-203ENST00000422760 HSP90AB1P08238 724 aaKnown RBP28.64■■■□□ 2.18
LSM8-203ENST00000422760 TBC1D2Q9BYX2 928 aa28.64■■■□□ 2.18
LSM8-203ENST00000422760 SHANK3Q9BYB0 1731 aa28.64■■■□□ 2.18
LSM8-203ENST00000422760 SLC39A6Q13433 755 aa28.63■■■□□ 2.17
LSM8-203ENST00000422760 GNAI2P04899 355 aa28.63■■■□□ 2.17
LSM8-203ENST00000422760 CARD10Q9BWT7 1032 aa28.63■■■□□ 2.17
LSM8-203ENST00000422760 STRN4Q9NRL3 753 aa28.63■■■□□ 2.17
LSM8-203ENST00000422760 PCDH11XQ9BZA7 1347 aa28.62■■■□□ 2.17
LSM8-203ENST00000422760 PCDH11YQ9BZA8 1340 aa28.62■■■□□ 2.17
LSM8-203ENST00000422760 GNAI3P08754 354 aa28.62■■■□□ 2.17
LSM8-203ENST00000422760 COL22A1Q8NFW1 1626 aaPredicted RBP28.61■■■□□ 2.17
LSM8-203ENST00000422760 LARP1Q6PKG0 1096 aaKnown RBP28.61■■■□□ 2.17
LSM8-203ENST00000422760 RBM25P49756 843 aaKnown RBP28.6■■■□□ 2.17
LSM8-203ENST00000422760 ADCY9O60503 1353 aa28.6■■■□□ 2.17
LSM8-203ENST00000422760 PROSER3Q2NL68 480 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms