RNA–Protein interactions for RNA: ENST00000422713.1

TTC38-204, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 5

Gene TTC38, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-204ENST00000422713 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
TTC38-204ENST00000422713 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
TTC38-204ENST00000422713 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
TTC38-204ENST00000422713 DIAPH1O60610 1272 aaKnown RBP17.8■□□□□ 0.44
TTC38-204ENST00000422713 HMOX1P09601 288 aa17.8■□□□□ 0.44
TTC38-204ENST00000422713 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
TTC38-204ENST00000422713 KLHL34Q8N239 644 aa17.8■□□□□ 0.44
TTC38-204ENST00000422713 LINC00116Q8NCU8 138 aa17.8■□□□□ 0.44
TTC38-204ENST00000422713 GOLGB1Q14789 3259 aaKnown RBP17.79■□□□□ 0.44
TTC38-204ENST00000422713 COL5A3P25940 1745 aaPredicted RBP17.79■□□□□ 0.44
TTC38-204ENST00000422713 PHF14O94880 888 aa17.79■□□□□ 0.44
TTC38-204ENST00000422713 ITPK1Q13572 414 aa17.79■□□□□ 0.44
TTC38-204ENST00000422713 AMIGO3Q86WK7 504 aa17.79■□□□□ 0.44
TTC38-204ENST00000422713 MRC1P22897 1456 aa17.78■□□□□ 0.44
TTC38-204ENST00000422713 ATP6V1AP38606 617 aa17.78■□□□□ 0.44
TTC38-204ENST00000422713 CABP4P57796 275 aa17.78■□□□□ 0.44
TTC38-204ENST00000422713 FLAD1Q8NFF5 587 aa17.78■□□□□ 0.44
TTC38-204ENST00000422713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.76■□□□□ 0.43
TTC38-204ENST00000422713 GNPATO15228 680 aa17.76■□□□□ 0.43
TTC38-204ENST00000422713 VIRMAQ69YN4 1812 aaKnown RBP17.76■□□□□ 0.43
TTC38-204ENST00000422713 ADAMTS7Q9UKP4 1686 aa17.75■□□□□ 0.43
TTC38-204ENST00000422713 SSFA2P28290 1259 aa17.75■□□□□ 0.43
TTC38-204ENST00000422713 AKAP4Q5JQC9 854 aa17.75■□□□□ 0.43
TTC38-204ENST00000422713 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
TTC38-204ENST00000422713 RBM42Q9BTD8 480 aaKnown RBP17.75■□□□□ 0.43
TTC38-204ENST00000422713 CICQ96RK0 1608 aaPredicted RBP17.75■□□□□ 0.43
TTC38-204ENST00000422713 U2SURPO15042 1029 aaKnown RBP17.74■□□□□ 0.43
TTC38-204ENST00000422713 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
TTC38-204ENST00000422713 TJP1Q07157 1748 aa17.74■□□□□ 0.43
TTC38-204ENST00000422713 YY1P25490 414 aa17.73■□□□□ 0.43
TTC38-204ENST00000422713 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
TTC38-204ENST00000422713 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
TTC38-204ENST00000422713 PTCD1O75127 700 aaKnown RBP17.71■□□□□ 0.43
TTC38-204ENST00000422713 MTHFSDQ2M296 383 aaKnown RBP17.71■□□□□ 0.43
TTC38-204ENST00000422713 NLGN2Q8NFZ4 835 aa17.71■□□□□ 0.43
TTC38-204ENST00000422713 C4AP0C0L4 1744 aa17.71■□□□□ 0.43
TTC38-204ENST00000422713 CNTNAP4Q9C0A0 1308 aa17.71■□□□□ 0.42
TTC38-204ENST00000422713 SLC52A2Q9HAB3 445 aa17.7■□□□□ 0.42
TTC38-204ENST00000422713 RNMTO43148 476 aaKnown RBP17.69■□□□□ 0.42
TTC38-204ENST00000422713 LGR6Q9HBX8 967 aa17.69■□□□□ 0.42
TTC38-204ENST00000422713 KCPQ6ZWJ8 1503 aa17.68■□□□□ 0.42
TTC38-204ENST00000422713 MYH14Q7Z406 1995 aaKnown RBP17.68■□□□□ 0.42
TTC38-204ENST00000422713 PPP2R1AP30153 589 aa17.68■□□□□ 0.42
TTC38-204ENST00000422713 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
TTC38-204ENST00000422713 RTCBQ9Y3I0 505 aaKnown RBP17.68■□□□□ 0.42
TTC38-204ENST00000422713 GPR162Q16538 588 aa17.67■□□□□ 0.42
TTC38-204ENST00000422713 UBR2Q8IWV8 1755 aa17.66■□□□□ 0.42
TTC38-204ENST00000422713 ADRA2BP18089 450 aa17.66■□□□□ 0.42
TTC38-204ENST00000422713 RC3H1Q5TC82 1133 aaKnown RBP17.66■□□□□ 0.42
TTC38-204ENST00000422713 GAS2L2Q8NHY3 880 aa17.66■□□□□ 0.42
TTC38-204ENST00000422713 CHD4Q14839 1912 aa17.66■□□□□ 0.42
TTC38-204ENST00000422713 PRKAR2BP31323 418 aa17.65■□□□□ 0.42
TTC38-204ENST00000422713 SIPA1L3O60292 1781 aaPredicted RBP17.64■□□□□ 0.41
TTC38-204ENST00000422713 CRKLP46109 303 aaKnown RBP17.64■□□□□ 0.41
TTC38-204ENST00000422713 SLC39A6Q13433 755 aa17.64■□□□□ 0.41
TTC38-204ENST00000422713 TRAPPC3LQ5T215 181 aa17.64■□□□□ 0.41
TTC38-204ENST00000422713 RSPH6AQ9H0K4 717 aa17.64■□□□□ 0.41
TTC38-204ENST00000422713 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
TTC38-204ENST00000422713 CD2APQ9Y5K6 639 aa17.64■□□□□ 0.41
TTC38-204ENST00000422713 RPS6KA4O75676 772 aa17.63■□□□□ 0.41
TTC38-204ENST00000422713 MMP10P09238 476 aa17.63■□□□□ 0.41
TTC38-204ENST00000422713 GNAT3A8MTJ3 354 aa17.62■□□□□ 0.41
TTC38-204ENST00000422713 U2AF1L5P0DN76 240 aaPredicted RBP17.62■□□□□ 0.41
TTC38-204ENST00000422713 U2AF1Q01081 240 aaKnown RBP eCLIP17.62■□□□□ 0.41
TTC38-204ENST00000422713 DNAJC10Q8IXB1 793 aa17.62■□□□□ 0.41
TTC38-204ENST00000422713 ARHGEF1Q92888 912 aaKnown RBP17.62■□□□□ 0.41
TTC38-204ENST00000422713 RFC4P35249 363 aa17.61■□□□□ 0.41
TTC38-204ENST00000422713 YBX3P16989 372 aaKnown RBP eCLIP17.6■□□□□ 0.41
TTC38-204ENST00000422713 TEFQ10587 303 aa17.6■□□□□ 0.41
TTC38-204ENST00000422713 PHACTR3Q96KR7 559 aa17.6■□□□□ 0.41
TTC38-204ENST00000422713 KIF13BQ9NQT8 1826 aa17.59■□□□□ 0.41
TTC38-204ENST00000422713 C10orf71Q711Q0 1435 aa17.59■□□□□ 0.41
TTC38-204ENST00000422713 CEMIPQ8WUJ3 1361 aa17.59■□□□□ 0.41
TTC38-204ENST00000422713 GYS1P13807 737 aa17.59■□□□□ 0.41
TTC38-204ENST00000422713 TTC5Q8N0Z6 440 aa17.59■□□□□ 0.41
TTC38-204ENST00000422713 IL17REQ8NFR9 667 aa17.59■□□□□ 0.41
TTC38-204ENST00000422713 CCDC87Q9NVE4 849 aa17.59■□□□□ 0.41
TTC38-204ENST00000422713 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
TTC38-204ENST00000422713 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
TTC38-204ENST00000422713 NLGN1Q8N2Q7 840 aa17.58■□□□□ 0.4
TTC38-204ENST00000422713 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.4
TTC38-204ENST00000422713 SOS1Q07889 1333 aaPredicted RBP17.57■□□□□ 0.4
TTC38-204ENST00000422713 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
TTC38-204ENST00000422713 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
TTC38-204ENST00000422713 COL15A1P39059 1388 aa17.56■□□□□ 0.4
TTC38-204ENST00000422713 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
TTC38-204ENST00000422713 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
TTC38-204ENST00000422713 WWC3Q9ULE0 1092 aa17.56■□□□□ 0.4
TTC38-204ENST00000422713 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
TTC38-204ENST00000422713 GRIN3BO60391 1043 aa17.55■□□□□ 0.4
TTC38-204ENST00000422713 FCHSD2O94868 740 aa17.55■□□□□ 0.4
TTC38-204ENST00000422713 HEG1Q9ULI3 1381 aa17.54■□□□□ 0.4
TTC38-204ENST00000422713 ZNF790Q6PG37 636 aa17.54■□□□□ 0.4
TTC38-204ENST00000422713 ZNF784Q8NCA9 323 aaPredicted RBP17.54■□□□□ 0.4
TTC38-204ENST00000422713 ZNF496Q96IT1 587 aaPredicted RBP17.54■□□□□ 0.4
TTC38-204ENST00000422713 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
TTC38-204ENST00000422713 SCN7AQ01118 1682 aa17.53■□□□□ 0.4
TTC38-204ENST00000422713 FKBP8Q14318 412 aa17.53■□□□□ 0.4
TTC38-204ENST00000422713 PARP3Q9Y6F1 533 aa17.53■□□□□ 0.4
TTC38-204ENST00000422713 RTF1Q92541 710 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms