RNA–Protein interactions for RNA: ENST00000422508.6

CD109-202, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-202ENST00000422508 TMCO5BA8MYB1 307 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 TTC39AQ5SRH9 613 aa10.76□□□□□ -0.69
CD109-202ENST00000422508 CCDC12Q8WUD4 166 aaPredicted RBP10.76□□□□□ -0.69
CD109-202ENST00000422508 A0A087WZG4 1122 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 ST20-MTHFSA0A0A6YYL1 179 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 RAB11FIP3O75154 756 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 PRPF40AO75400 957 aaKnown RBP10.75□□□□□ -0.69
CD109-202ENST00000422508 FGD6Q6ZV73 1430 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 SENP3-EIF4A1A0A087X0R7 540 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 LARP1BQ659C4 914 aaKnown RBP10.75□□□□□ -0.69
CD109-202ENST00000422508 CCDC97Q96F63 343 aaPredicted RBP10.75□□□□□ -0.69
CD109-202ENST00000422508 TMEM266Q2M3C6 531 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 WDR63Q8IWG1 891 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.75□□□□□ -0.69
CD109-202ENST00000422508 RPGRIP1LQ68CZ1 1315 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 CEP135Q66GS9 1140 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 ANAPC4Q9UJX5 808 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 FIBPO43427 364 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 FBXW7Q969H0 707 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 SPC24Q8NBT2 197 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 EXOC6Q8TAG9 804 aa10.75□□□□□ -0.69
CD109-202ENST00000422508 CCDC14Q49A88 953 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 C10orf67Q8IYJ2 551 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 KIAA1524Q8TCG1 905 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 MPHOSPH6Q99547 160 aaKnown RBP10.74□□□□□ -0.69
CD109-202ENST00000422508 ADGBQ8N7X0 1667 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 MAP4K4O95819 1239 aaPredicted RBP10.74□□□□□ -0.69
CD109-202ENST00000422508 STX1AQ16623 288 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 SLU7O95391 586 aaKnown RBP10.74□□□□□ -0.69
CD109-202ENST00000422508 ZFYP08048 801 aaPredicted RBP10.74□□□□□ -0.69
CD109-202ENST00000422508 CLUL1Q15846 466 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 CEP83Q9Y592 693 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 HSF2BPO75031 334 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 UBAC1Q9BSL1 405 aa10.74□□□□□ -0.69
CD109-202ENST00000422508 OPA1O60313 960 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 FAM193AP78312 1265 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 CFAP100Q494V2 611 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 SMARCC1Q92922 1105 aaPredicted RBP10.73□□□□□ -0.69
CD109-202ENST00000422508 NAP1L3Q99457 506 aaPredicted RBP10.73□□□□□ -0.69
CD109-202ENST00000422508 USP25Q9UHP3 1055 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 PIP4K2BP78356 416 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 NBPF1Q3BBV0 1214 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 NEUROD6Q96NK8 337 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 TACC1O75410 805 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 NKTRP30414 1462 aaKnown RBP10.73□□□□□ -0.69
CD109-202ENST00000422508 LRRC9Q6ZRR7 1453 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 ALDH3A1P30838 453 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 LARP1Q6PKG0 1096 aaKnown RBP10.73□□□□□ -0.69
CD109-202ENST00000422508 BLOC1S2Q6QNY1 142 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 PTPN23Q9H3S7 1636 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 SLF2Q8IX21 1173 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 WDHD1O75717 1129 aaPredicted RBP10.73□□□□□ -0.69
CD109-202ENST00000422508 ERCC6LQ2NKX8 1250 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 UVSSAQ2YD98 709 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 MSL1Q68DK7 614 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 BMP15O95972 392 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 SELENOOQ9BVL4 669 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 ATP2A1O14983 1001 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 ATP5DP30049 168 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 ACTN2P35609 894 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 CLIP2Q9UDT6 1046 aa10.73□□□□□ -0.69
CD109-202ENST00000422508 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
CD109-202ENST00000422508 TOP1P11387 765 aaKnown RBP10.72□□□□□ -0.69
CD109-202ENST00000422508 RAB3IL1Q8TBN0 382 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 LNPKQ9C0E8 428 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 RBM25P49756 843 aaKnown RBP10.72□□□□□ -0.69
CD109-202ENST00000422508 TIAM1Q13009 1591 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 CACNA2D4Q7Z3S7 1137 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 RNF214Q8ND24 703 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 RSRC1Q96IZ7 334 aaKnown RBP10.72□□□□□ -0.69
CD109-202ENST00000422508 TSGA10Q9BZW7 698 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 RMND1Q9NWS8 449 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 EIF2S2P20042 333 aaKnown RBP10.72□□□□□ -0.69
CD109-202ENST00000422508 KRT222Q8N1A0 295 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 CASKIN1Q8WXD9 1431 aa10.72□□□□□ -0.69
CD109-202ENST00000422508 MATR3P43243 847 aaKnown RBP eCLIP10.71□□□□□ -0.69
CD109-202ENST00000422508 MLECQ14165 292 aa10.71□□□□□ -0.69
CD109-202ENST00000422508 SKIDA1Q1XH10 827 aa10.71□□□□□ -0.69
CD109-202ENST00000422508 SMC6Q96SB8 1091 aa10.71□□□□□ -0.69
CD109-202ENST00000422508 EPRSP07814 1512 aaKnown RBP10.71□□□□□ -0.69
CD109-202ENST00000422508 ARID4AP29374 1257 aaPredicted RBP10.71□□□□□ -0.69
CD109-202ENST00000422508 TRAF1Q13077 416 aa10.71□□□□□ -0.69
CD109-202ENST00000422508 PLEKHO1Q53GL0 409 aaPredicted RBP10.71□□□□□ -0.69
CD109-202ENST00000422508 DDX19AQ9NUU7 478 aaKnown RBP10.71□□□□□ -0.69
CD109-202ENST00000422508 AKNAQ7Z591 1439 aa10.71□□□□□ -0.69
CD109-202ENST00000422508 ABCC11Q96J66 1382 aa10.71□□□□□ -0.69
CD109-202ENST00000422508 AKAP2Q9Y2D5 859 aa10.71□□□□□ -0.69
CD109-202ENST00000422508 HS1BP3Q53T59 392 aa10.71□□□□□ -0.7
CD109-202ENST00000422508 SYNJ2O15056 1496 aa10.71□□□□□ -0.7
CD109-202ENST00000422508 CCDC77Q9BR77 488 aa10.71□□□□□ -0.7
CD109-202ENST00000422508 KIF5AQ12840 1032 aa10.7□□□□□ -0.7
CD109-202ENST00000422508 IFT74Q96LB3 600 aa10.7□□□□□ -0.7
CD109-202ENST00000422508 IQCGQ9H095 443 aaKnown RBP10.7□□□□□ -0.7
CD109-202ENST00000422508 ARFGAP3Q9NP61 516 aa10.7□□□□□ -0.7
CD109-202ENST00000422508 STIM2Q9P246 746 aa10.7□□□□□ -0.7
CD109-202ENST00000422508 MNAT1P51948 309 aa10.7□□□□□ -0.7
CD109-202ENST00000422508 RBM28Q9NW13 759 aaKnown RBP10.7□□□□□ -0.7
CD109-202ENST00000422508 RRP7AQ9Y3A4 280 aaKnown RBP10.7□□□□□ -0.7
CD109-202ENST00000422508 CTNNA2P26232 953 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms