RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
HPS4-204ENST00000422379 MRC1P22897 1456 aa11.63□□□□□ -0.55
HPS4-204ENST00000422379 THSD7AQ9UPZ6 1657 aa11.63□□□□□ -0.55
HPS4-204ENST00000422379 RNF123Q5XPI4 1314 aa11.63□□□□□ -0.55
HPS4-204ENST00000422379 CALD1Q05682 793 aaKnown RBP11.62□□□□□ -0.55
HPS4-204ENST00000422379 TAF7Q15545 349 aaPredicted RBP11.62□□□□□ -0.55
HPS4-204ENST00000422379 MARCH10Q8NA82 808 aaPredicted RBP11.62□□□□□ -0.55
HPS4-204ENST00000422379 DCAF5Q96JK2 942 aa11.62□□□□□ -0.55
HPS4-204ENST00000422379 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
HPS4-204ENST00000422379 TSPYL4Q9UJ04 414 aa11.62□□□□□ -0.55
HPS4-204ENST00000422379 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
HPS4-204ENST00000422379 BCAR3O75815 825 aa11.62□□□□□ -0.55
HPS4-204ENST00000422379 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
HPS4-204ENST00000422379 NFATC2IPQ8NCF5 419 aa11.62□□□□□ -0.55
HPS4-204ENST00000422379 RGS17Q9UGC6 210 aaPredicted RBP11.62□□□□□ -0.55
HPS4-204ENST00000422379 EXOC5O00471 708 aa11.61□□□□□ -0.55
HPS4-204ENST00000422379 SLC52A2Q9HAB3 445 aa11.61□□□□□ -0.55
HPS4-204ENST00000422379 KDM3BQ7LBC6 1761 aa11.61□□□□□ -0.55
HPS4-204ENST00000422379 VAMP4O75379 141 aa11.6□□□□□ -0.55
HPS4-204ENST00000422379 RARSP54136 660 aaKnown RBP11.6□□□□□ -0.55
HPS4-204ENST00000422379 SLC39A6Q13433 755 aa11.6□□□□□ -0.55
HPS4-204ENST00000422379 DDB1Q16531 1140 aa11.6□□□□□ -0.55
HPS4-204ENST00000422379 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
HPS4-204ENST00000422379 BCL2L13Q9BXK5 485 aa11.6□□□□□ -0.55
HPS4-204ENST00000422379 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
HPS4-204ENST00000422379 PLIN1O60240 522 aa11.6□□□□□ -0.55
HPS4-204ENST00000422379 TEFQ10587 303 aa11.6□□□□□ -0.55
HPS4-204ENST00000422379 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
HPS4-204ENST00000422379 TRPC5Q9UL62 973 aaPredicted RBP11.6□□□□□ -0.55
HPS4-204ENST00000422379 BTBD11A6QL63 1104 aa11.59□□□□□ -0.55
HPS4-204ENST00000422379 ONECUT3O60422 494 aaPredicted RBP11.59□□□□□ -0.55
HPS4-204ENST00000422379 FAM182BQ5T319 152 aa11.59□□□□□ -0.55
HPS4-204ENST00000422379 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.55
HPS4-204ENST00000422379 TCERG1O14776 1098 aaKnown RBP11.58□□□□□ -0.55
HPS4-204ENST00000422379 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.55
HPS4-204ENST00000422379 SSH1Q8WYL5 1049 aa11.58□□□□□ -0.55
HPS4-204ENST00000422379 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
HPS4-204ENST00000422379 TWISTNBQ3B726 338 aaPredicted RBP11.58□□□□□ -0.56
HPS4-204ENST00000422379 TNNQ9UQP3 1299 aa11.58□□□□□ -0.56
HPS4-204ENST00000422379 HEG1Q9ULI3 1381 aa11.58□□□□□ -0.56
HPS4-204ENST00000422379 ERVV-2B6SEH9 535 aa11.57□□□□□ -0.56
HPS4-204ENST00000422379 RRP1P56182 461 aaKnown RBP11.57□□□□□ -0.56
HPS4-204ENST00000422379 C20orf194Q5TEA3 1177 aa11.57□□□□□ -0.56
HPS4-204ENST00000422379 PTF1AQ7RTS3 328 aa11.57□□□□□ -0.56
HPS4-204ENST00000422379 BABAM1Q9NWV8 329 aa11.57□□□□□ -0.56
HPS4-204ENST00000422379 CABP4P57796 275 aa11.56□□□□□ -0.56
HPS4-204ENST00000422379 ZNF790Q6PG37 636 aa11.56□□□□□ -0.56
HPS4-204ENST00000422379 PIGBQ92521 554 aa11.56□□□□□ -0.56
HPS4-204ENST00000422379 PPP4R2Q9NY27 417 aa11.56□□□□□ -0.56
HPS4-204ENST00000422379 DOT1LQ8TEK3 1739 aa11.56□□□□□ -0.56
HPS4-204ENST00000422379 PAPPAQ13219 1627 aa11.56□□□□□ -0.56
HPS4-204ENST00000422379 KCNQ2O43526 872 aa11.56□□□□□ -0.56
HPS4-204ENST00000422379 SEPT12Q8IYM1 358 aa11.56□□□□□ -0.56
HPS4-204ENST00000422379 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
HPS4-204ENST00000422379 A0A0G2JS52 829 aa11.55□□□□□ -0.56
HPS4-204ENST00000422379 PRIM1P49642 420 aaKnown RBP11.55□□□□□ -0.56
HPS4-204ENST00000422379 MYT1Q01538 1121 aa11.55□□□□□ -0.56
HPS4-204ENST00000422379 POTEAQ6S8J7 498 aa11.55□□□□□ -0.56
HPS4-204ENST00000422379 ACSBG1Q96GR2 724 aa11.55□□□□□ -0.56
HPS4-204ENST00000422379 ZNF496Q96IT1 587 aaPredicted RBP11.55□□□□□ -0.56
HPS4-204ENST00000422379 BCL9O00512 1426 aa11.55□□□□□ -0.56
HPS4-204ENST00000422379 ITGB4P16144 1822 aa11.55□□□□□ -0.56
HPS4-204ENST00000422379 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
HPS4-204ENST00000422379 ASAP1Q9ULH1 1129 aa11.54□□□□□ -0.56
HPS4-204ENST00000422379 NECTIN2Q92692 538 aa11.54□□□□□ -0.56
HPS4-204ENST00000422379 C5P01031 1676 aa11.54□□□□□ -0.56
HPS4-204ENST00000422379 UBR2Q8IWV8 1755 aa11.53□□□□□ -0.56
HPS4-204ENST00000422379 GIGYF1O75420 1035 aaPredicted RBP11.53□□□□□ -0.56
HPS4-204ENST00000422379 MRPL50Q8N5N7 158 aaKnown RBP11.53□□□□□ -0.56
HPS4-204ENST00000422379 ATG3Q9NT62 314 aa11.53□□□□□ -0.56
HPS4-204ENST00000422379 SMC4Q9NTJ3 1288 aa11.53□□□□□ -0.56
HPS4-204ENST00000422379 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
HPS4-204ENST00000422379 ZNF772Q68DY9 489 aaPredicted RBP11.52□□□□□ -0.56
HPS4-204ENST00000422379 SYTL4Q96C24 671 aaPredicted RBP11.52□□□□□ -0.56
HPS4-204ENST00000422379 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.56
HPS4-204ENST00000422379 BRWD3Q6RI45 1802 aa11.52□□□□□ -0.56
HPS4-204ENST00000422379 RLBP1P12271 317 aa11.52□□□□□ -0.57
HPS4-204ENST00000422379 G2E3Q7L622 706 aa11.52□□□□□ -0.57
HPS4-204ENST00000422379 PTCD1O75127 700 aaKnown RBP11.51□□□□□ -0.57
HPS4-204ENST00000422379 RBM6P78332 1123 aaKnown RBP11.51□□□□□ -0.57
HPS4-204ENST00000422379 ALDH1L2Q3SY69 923 aa11.51□□□□□ -0.57
HPS4-204ENST00000422379 B4GALNT3Q6L9W6 998 aa11.51□□□□□ -0.57
HPS4-204ENST00000422379 FRAT1Q92837 279 aaPredicted RBP11.51□□□□□ -0.57
HPS4-204ENST00000422379 NOB1Q9ULX3 412 aaKnown RBP11.51□□□□□ -0.57
HPS4-204ENST00000422379 ANXA1P04083 346 aa11.5□□□□□ -0.57
HPS4-204ENST00000422379 PROSER3Q2NL68 480 aa11.5□□□□□ -0.57
HPS4-204ENST00000422379 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
HPS4-204ENST00000422379 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
HPS4-204ENST00000422379 RGS12O14924 1447 aa11.5□□□□□ -0.57
HPS4-204ENST00000422379 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
HPS4-204ENST00000422379 PANK1Q8TE04 598 aa11.5□□□□□ -0.57
HPS4-204ENST00000422379 TRIM27P14373 513 aa11.49□□□□□ -0.57
HPS4-204ENST00000422379 EIF2S2P20042 333 aaKnown RBP11.49□□□□□ -0.57
HPS4-204ENST00000422379 HDGFL1Q5TGJ6 251 aa11.49□□□□□ -0.57
HPS4-204ENST00000422379 ZNF428Q96B54 188 aa11.49□□□□□ -0.57
HPS4-204ENST00000422379 CHPF2Q9P2E5 772 aa11.49□□□□□ -0.57
HPS4-204ENST00000422379 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 PIP4K2AP48426 406 aaPredicted RBP11.48□□□□□ -0.57
HPS4-204ENST00000422379 PDIA6Q15084 440 aa11.48□□□□□ -0.57
HPS4-204ENST00000422379 TTC5Q8N0Z6 440 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms