RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 SSFA2P28290 1259 aa24.02■■□□□ 1.44
HDLBP-208ENST00000422080 C5P01031 1676 aa24.02■■□□□ 1.44
HDLBP-208ENST00000422080 AKAP4Q5JQC9 854 aa24.01■■□□□ 1.43
HDLBP-208ENST00000422080 AMIGO3Q86WK7 504 aa24.01■■□□□ 1.43
HDLBP-208ENST00000422080 HMOX1P09601 288 aa24■■□□□ 1.43
HDLBP-208ENST00000422080 MSL1Q68DK7 614 aa24■■□□□ 1.43
HDLBP-208ENST00000422080 KLHL34Q8N239 644 aa24■■□□□ 1.43
HDLBP-208ENST00000422080 COL24A1Q17RW2 1714 aa24■■□□□ 1.43
HDLBP-208ENST00000422080 TUBGCP6Q96RT7 1819 aa24■■□□□ 1.43
HDLBP-208ENST00000422080 C4BP0C0L5 1744 aa23.99■■□□□ 1.43
HDLBP-208ENST00000422080 NFATC2IPQ8NCF5 419 aa23.99■■□□□ 1.43
HDLBP-208ENST00000422080 SLC4A9Q96Q91 983 aa23.99■■□□□ 1.43
HDLBP-208ENST00000422080 RBM42Q9BTD8 480 aaKnown RBP23.99■■□□□ 1.43
HDLBP-208ENST00000422080 PHF14O94880 888 aa23.98■■□□□ 1.43
HDLBP-208ENST00000422080 GNPATO15228 680 aa23.97■■□□□ 1.43
HDLBP-208ENST00000422080 CNGB1Q14028 1251 aaPredicted RBP23.97■■□□□ 1.43
HDLBP-208ENST00000422080 RC3H1Q5TC82 1133 aaKnown RBP23.97■■□□□ 1.43
HDLBP-208ENST00000422080 SMIM5Q71RC9 77 aa23.96■■□□□ 1.43
HDLBP-208ENST00000422080 TAF1LQ8IZX4 1826 aa23.96■■□□□ 1.43
HDLBP-208ENST00000422080 GPR162Q16538 588 aa23.94■■□□□ 1.42
HDLBP-208ENST00000422080 RTCBQ9Y3I0 505 aaKnown RBP23.94■■□□□ 1.42
HDLBP-208ENST00000422080 CD2APQ9Y5K6 639 aa23.94■■□□□ 1.42
HDLBP-208ENST00000422080 MTHFSDQ2M296 383 aaKnown RBP23.93■■□□□ 1.42
HDLBP-208ENST00000422080 NLGN2Q8NFZ4 835 aa23.93■■□□□ 1.42
HDLBP-208ENST00000422080 LGR6Q9HBX8 967 aa23.93■■□□□ 1.42
HDLBP-208ENST00000422080 CNTNAP4Q9C0A0 1308 aa23.92■■□□□ 1.42
HDLBP-208ENST00000422080 RNMTO43148 476 aaKnown RBP23.92■■□□□ 1.42
HDLBP-208ENST00000422080 TRAPPC3LQ5T215 181 aa23.92■■□□□ 1.42
HDLBP-208ENST00000422080 SLC52A2Q9HAB3 445 aa23.92■■□□□ 1.42
HDLBP-208ENST00000422080 U2SURPO15042 1029 aaKnown RBP23.91■■□□□ 1.42
HDLBP-208ENST00000422080 PTCD1O75127 700 aaKnown RBP23.91■■□□□ 1.42
HDLBP-208ENST00000422080 ADRA2BP18089 450 aa23.91■■□□□ 1.42
HDLBP-208ENST00000422080 COL3A1P02461 1466 aaPredicted RBP23.91■■□□□ 1.42
HDLBP-208ENST00000422080 CFAP53Q96M91 514 aa23.9■■□□□ 1.42
HDLBP-208ENST00000422080 RPS6KA4O75676 772 aa23.89■■□□□ 1.41
HDLBP-208ENST00000422080 UBR3Q6ZT12 1888 aa23.87■■□□□ 1.41
HDLBP-208ENST00000422080 UTRNP46939 3433 aa23.87■■□□□ 1.41
HDLBP-208ENST00000422080 ZNF831Q5JPB2 1677 aa23.87■■□□□ 1.41
HDLBP-208ENST00000422080 ARHGEF1Q92888 912 aaKnown RBP23.87■■□□□ 1.41
HDLBP-208ENST00000422080 PPP2R1AP30153 589 aa23.86■■□□□ 1.41
HDLBP-208ENST00000422080 NLGN1Q8N2Q7 840 aa23.86■■□□□ 1.41
HDLBP-208ENST00000422080 GAS2L2Q8NHY3 880 aa23.86■■□□□ 1.41
HDLBP-208ENST00000422080 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
HDLBP-208ENST00000422080 NUDCQ9Y266 331 aa23.85■■□□□ 1.41
HDLBP-208ENST00000422080 GRIN3BO60391 1043 aa23.84■■□□□ 1.41
HDLBP-208ENST00000422080 RFC4P35249 363 aa23.84■■□□□ 1.41
HDLBP-208ENST00000422080 CRKLP46109 303 aaKnown RBP23.84■■□□□ 1.41
HDLBP-208ENST00000422080 GNAT3A8MTJ3 354 aa23.82■■□□□ 1.4
HDLBP-208ENST00000422080 MMP10P09238 476 aa23.82■■□□□ 1.4
HDLBP-208ENST00000422080 SLC39A6Q13433 755 aa23.82■■□□□ 1.4
HDLBP-208ENST00000422080 MRC1P22897 1456 aa23.81■■□□□ 1.4
HDLBP-208ENST00000422080 YBX3P16989 372 aaKnown RBP eCLIP23.81■■□□□ 1.4
HDLBP-208ENST00000422080 GYS1P13807 737 aa23.8■■□□□ 1.4
HDLBP-208ENST00000422080 INTS5Q6P9B9 1019 aaKnown RBP23.8■■□□□ 1.4
HDLBP-208ENST00000422080 DNAJC10Q8IXB1 793 aa23.8■■□□□ 1.4
HDLBP-208ENST00000422080 RSPH6AQ9H0K4 717 aa23.8■■□□□ 1.4
HDLBP-208ENST00000422080 SCN11AQ9UI33 1791 aa23.8■■□□□ 1.4
HDLBP-208ENST00000422080 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
HDLBP-208ENST00000422080 IL17REQ8NFR9 667 aa23.79■■□□□ 1.4
HDLBP-208ENST00000422080 PRKAR2BP31323 418 aa23.78■■□□□ 1.4
HDLBP-208ENST00000422080 ZNF784Q8NCA9 323 aaPredicted RBP23.78■■□□□ 1.4
HDLBP-208ENST00000422080 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
HDLBP-208ENST00000422080 FCHSD2O94868 740 aa23.77■■□□□ 1.4
HDLBP-208ENST00000422080 U2AF1L5P0DN76 240 aaPredicted RBP23.77■■□□□ 1.4
HDLBP-208ENST00000422080 CYP19A1P11511 503 aaPredicted RBP23.77■■□□□ 1.4
HDLBP-208ENST00000422080 U2AF1Q01081 240 aaKnown RBP eCLIP23.77■■□□□ 1.4
HDLBP-208ENST00000422080 TEFQ10587 303 aa23.77■■□□□ 1.4
HDLBP-208ENST00000422080 CCDC87Q9NVE4 849 aa23.77■■□□□ 1.4
HDLBP-208ENST00000422080 COL5A3P25940 1745 aaPredicted RBP23.76■■□□□ 1.39
HDLBP-208ENST00000422080 ADAMTS7Q9UKP4 1686 aa23.76■■□□□ 1.39
HDLBP-208ENST00000422080 TTC5Q8N0Z6 440 aa23.75■■□□□ 1.39
HDLBP-208ENST00000422080 GOLGB1Q14789 3259 aaKnown RBP23.74■■□□□ 1.39
HDLBP-208ENST00000422080 USP42Q9H9J4 1324 aaKnown RBP23.74■■□□□ 1.39
HDLBP-208ENST00000422080 SRP68Q9UHB9 627 aaKnown RBP23.73■■□□□ 1.39
HDLBP-208ENST00000422080 PARP3Q9Y6F1 533 aa23.73■■□□□ 1.39
HDLBP-208ENST00000422080 SOS1Q07889 1333 aaPredicted RBP23.73■■□□□ 1.39
HDLBP-208ENST00000422080 KCPQ6ZWJ8 1503 aa23.73■■□□□ 1.39
HDLBP-208ENST00000422080 CICQ96RK0 1608 aaPredicted RBP23.73■■□□□ 1.39
HDLBP-208ENST00000422080 TGFB2P61812 414 aa23.72■■□□□ 1.39
HDLBP-208ENST00000422080 ZNF790Q6PG37 636 aa23.72■■□□□ 1.39
HDLBP-208ENST00000422080 CEMIPQ8WUJ3 1361 aa23.72■■□□□ 1.39
HDLBP-208ENST00000422080 STARD3NLO95772 234 aa23.71■■□□□ 1.39
HDLBP-208ENST00000422080 FKBP8Q14318 412 aa23.71■■□□□ 1.39
HDLBP-208ENST00000422080 MYH14Q7Z406 1995 aaKnown RBP23.71■■□□□ 1.39
HDLBP-208ENST00000422080 ZPR1O75312 459 aa23.7■■□□□ 1.38
HDLBP-208ENST00000422080 TEX13AQ9BXU3 409 aaPredicted RBP23.7■■□□□ 1.38
HDLBP-208ENST00000422080 TJP1Q07157 1748 aa23.7■■□□□ 1.38
HDLBP-208ENST00000422080 ZNF496Q96IT1 587 aaPredicted RBP23.69■■□□□ 1.38
HDLBP-208ENST00000422080 ZBTB1Q9Y2K1 713 aa23.69■■□□□ 1.38
HDLBP-208ENST00000422080 HTATSF1O43719 755 aaKnown RBP23.67■■□□□ 1.38
HDLBP-208ENST00000422080 TM4SF1P30408 202 aa23.67■■□□□ 1.38
HDLBP-208ENST00000422080 RTF1Q92541 710 aaKnown RBP23.67■■□□□ 1.38
HDLBP-208ENST00000422080 NARFQ9UHQ1 456 aa23.67■■□□□ 1.38
HDLBP-208ENST00000422080 C10orf71Q711Q0 1435 aa23.67■■□□□ 1.38
HDLBP-208ENST00000422080 HEG1Q9ULI3 1381 aa23.66■■□□□ 1.38
HDLBP-208ENST00000422080 BTBD11A6QL63 1104 aa23.66■■□□□ 1.38
HDLBP-208ENST00000422080 USPL1Q5W0Q7 1092 aa23.66■■□□□ 1.38
HDLBP-208ENST00000422080 FMNL2Q96PY5 1086 aa23.66■■□□□ 1.38
HDLBP-208ENST00000422080 CHD4Q14839 1912 aa23.66■■□□□ 1.38
HDLBP-208ENST00000422080 DDR1Q08345 913 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms