RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 FCHSD2O94868 740 aa9.39□□□□□ -0.91
PMS1-208ENST00000421722 RC3H1Q5TC82 1133 aaKnown RBP9.39□□□□□ -0.91
PMS1-208ENST00000421722 PIGBQ92521 554 aa9.39□□□□□ -0.91
PMS1-208ENST00000421722 CAPN15O75808 1086 aa9.39□□□□□ -0.91
PMS1-208ENST00000421722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.39□□□□□ -0.916e-7■■□□□ 13.8
PMS1-208ENST00000421722 SPG7Q9UQ90 795 aa9.39□□□□□ -0.91
PMS1-208ENST00000421722 GNPATO15228 680 aa9.38□□□□□ -0.91
PMS1-208ENST00000421722 DPEP1P16444 411 aa9.38□□□□□ -0.91
PMS1-208ENST00000421722 TMF1P82094 1093 aa9.38□□□□□ -0.91
PMS1-208ENST00000421722 DCAF5Q96JK2 942 aa9.38□□□□□ -0.91
PMS1-208ENST00000421722 FLT4P35916 1363 aa9.38□□□□□ -0.91
PMS1-208ENST00000421722 TRAPPC3LQ5T215 181 aa9.38□□□□□ -0.91
PMS1-208ENST00000421722 A0A0G2JLW4 131 aa9.37□□□□□ -0.91
PMS1-208ENST00000421722 SLC34A2O95436 690 aa9.37□□□□□ -0.91
PMS1-208ENST00000421722 USHBP1Q8N6Y0 703 aa9.37□□□□□ -0.91
PMS1-208ENST00000421722 CARD11Q9BXL7 1154 aa9.37□□□□□ -0.91
PMS1-208ENST00000421722 WWC3Q9ULE0 1092 aa9.37□□□□□ -0.91
PMS1-208ENST00000421722 RTCBQ9Y3I0 505 aaKnown RBP9.37□□□□□ -0.91
PMS1-208ENST00000421722 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
PMS1-208ENST00000421722 KCPQ6ZWJ8 1503 aa9.37□□□□□ -0.91
PMS1-208ENST00000421722 ITPK1Q13572 414 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 TMOD3Q9NYL9 352 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 PIM2Q9P1W9 311 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 CNTNAP4Q9C0A0 1308 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 KDRP35968 1356 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 TONSLQ96HA7 1378 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 HSPA1AP0DMV8 641 aaKnown RBP9.36□□□□□ -0.91
PMS1-208ENST00000421722 HSPA1BP0DMV9 641 aaKnown RBP9.36□□□□□ -0.91
PMS1-208ENST00000421722 KCNA3P22001 575 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 ATP6V1AP38606 617 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 RRAGCQ9HB90 399 aa9.36□□□□□ -0.91
PMS1-208ENST00000421722 DALRD3Q5D0E6 543 aaKnown RBP9.35□□□□□ -0.91
PMS1-208ENST00000421722 RPS6KA4O75676 772 aa9.35□□□□□ -0.91
PMS1-208ENST00000421722 RRS1Q15050 365 aaKnown RBP9.35□□□□□ -0.91
PMS1-208ENST00000421722 KDM6AO15550 1401 aaPredicted RBP9.35□□□□□ -0.91
PMS1-208ENST00000421722 FYB1O15117 783 aa9.34□□□□□ -0.91
PMS1-208ENST00000421722 HTRA3P83110 453 aa9.34□□□□□ -0.91
PMS1-208ENST00000421722 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
PMS1-208ENST00000421722 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
PMS1-208ENST00000421722 RNF181Q9P0P0 153 aa9.34□□□□□ -0.91
PMS1-208ENST00000421722 COL5A3P25940 1745 aaPredicted RBP9.34□□□□□ -0.91
PMS1-208ENST00000421722 KIF20BQ96Q89 1820 aa9.34□□□□□ -0.91
PMS1-208ENST00000421722 GYS1P13807 737 aa9.34□□□□□ -0.91
PMS1-208ENST00000421722 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
PMS1-208ENST00000421722 SBF1O95248 1867 aa9.33□□□□□ -0.92
PMS1-208ENST00000421722 FBLN1P23142 703 aa9.33□□□□□ -0.92
PMS1-208ENST00000421722 HSP90AB2PQ58FF8 381 aa9.33□□□□□ -0.92
PMS1-208ENST00000421722 ARHGEF1Q92888 912 aaKnown RBP9.33□□□□□ -0.92
PMS1-208ENST00000421722 ASAP1Q9ULH1 1129 aa9.33□□□□□ -0.92
PMS1-208ENST00000421722 VEGFAP15692 232 aaPredicted RBP9.33□□□□□ -0.92
PMS1-208ENST00000421722 RFC4P35249 363 aa9.33□□□□□ -0.92
PMS1-208ENST00000421722 SIN3AQ96ST3 1273 aa9.33□□□□□ -0.92
PMS1-208ENST00000421722 PRDM10Q9NQV6 1147 aa9.33□□□□□ -0.92
PMS1-208ENST00000421722 ANKRD26Q9UPS8 1709 aa9.32□□□□□ -0.92
PMS1-208ENST00000421722 ERVV-2B6SEH9 535 aa9.32□□□□□ -0.92
PMS1-208ENST00000421722 PHKG2P15735 406 aa9.32□□□□□ -0.92
PMS1-208ENST00000421722 TESK2Q96S53 571 aa9.32□□□□□ -0.92
PMS1-208ENST00000421722 HSP90AB1P08238 724 aaKnown RBP9.31□□□□□ -0.92
PMS1-208ENST00000421722 GLTPD2A6NH11 291 aa9.31□□□□□ -0.92
PMS1-208ENST00000421722 GGNBP2Q9H3C7 697 aa9.31□□□□□ -0.92
PMS1-208ENST00000421722 PCDH10Q9P2E7 1040 aa9.31□□□□□ -0.92
PMS1-208ENST00000421722 LMNB1P20700 586 aa9.3□□□□□ -0.92
PMS1-208ENST00000421722 WASHC2AQ641Q2 1341 aa9.3□□□□□ -0.92
PMS1-208ENST00000421722 NEUROD1Q13562 356 aa9.29□□□□□ -0.92
PMS1-208ENST00000421722 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
PMS1-208ENST00000421722 CREBZFQ9NS37 354 aa9.29□□□□□ -0.92
PMS1-208ENST00000421722 DLEC1Q9Y238 1755 aa9.28□□□□□ -0.92
PMS1-208ENST00000421722 USP42Q9H9J4 1324 aaKnown RBP9.28□□□□□ -0.92
PMS1-208ENST00000421722 TM4SF1P30408 202 aa9.28□□□□□ -0.92
PMS1-208ENST00000421722 DDR1Q08345 913 aa9.28□□□□□ -0.92
PMS1-208ENST00000421722 CDCA8Q53HL2 280 aa9.28□□□□□ -0.92
PMS1-208ENST00000421722 EYA1Q99502 592 aa9.28□□□□□ -0.92
PMS1-208ENST00000421722 RBM42Q9BTD8 480 aaKnown RBP9.28□□□□□ -0.92
PMS1-208ENST00000421722 PDZRN3Q9UPQ7 1066 aa9.28□□□□□ -0.92
PMS1-208ENST00000421722 TIAM2Q8IVF5 1701 aa9.27□□□□□ -0.92
PMS1-208ENST00000421722 NRXN2Q9P2S2 1712 aa9.27□□□□□ -0.93
PMS1-208ENST00000421722 POLRMTO00411 1230 aaKnown RBP9.27□□□□□ -0.93
PMS1-208ENST00000421722 CTCFP49711 727 aaPredicted RBP9.27□□□□□ -0.93
PMS1-208ENST00000421722 CEP350Q5VT06 3117 aa9.27□□□□□ -0.93
PMS1-208ENST00000421722 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
PMS1-208ENST00000421722 CHRNA5P30532 468 aa9.26□□□□□ -0.93
PMS1-208ENST00000421722 FKBP8Q14318 412 aa9.26□□□□□ -0.93
PMS1-208ENST00000421722 CHADLQ6NUI6 762 aa9.26□□□□□ -0.93
PMS1-208ENST00000421722 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
PMS1-208ENST00000421722 ADAMTS7Q9UKP4 1686 aa9.26□□□□□ -0.93
PMS1-208ENST00000421722 RASSF7Q02833 373 aa9.25□□□□□ -0.93
PMS1-208ENST00000421722 PLEKHO1Q53GL0 409 aaPredicted RBP9.25□□□□□ -0.93
PMS1-208ENST00000421722 DPY19L2Q6NUT2 758 aa9.25□□□□□ -0.93
PMS1-208ENST00000421722 AIDAQ96BJ3 306 aa9.25□□□□□ -0.93
PMS1-208ENST00000421722 MYH14Q7Z406 1995 aaKnown RBP9.25□□□□□ -0.93
PMS1-208ENST00000421722 CNTNAP1P78357 1384 aa9.25□□□□□ -0.93
PMS1-208ENST00000421722 TJP1Q07157 1748 aa9.25□□□□□ -0.93
PMS1-208ENST00000421722 CRKLP46109 303 aaKnown RBP9.25□□□□□ -0.93
PMS1-208ENST00000421722 CABP4P57796 275 aa9.25□□□□□ -0.93
PMS1-208ENST00000421722 AMOTQ4VCS5 1084 aa9.25□□□□□ -0.93
PMS1-208ENST00000421722 POTECB2RU33 542 aa9.24□□□□□ -0.93
PMS1-208ENST00000421722 TTLL6Q8N841 843 aa9.24□□□□□ -0.93
PMS1-208ENST00000421722 SRP68Q9UHB9 627 aaKnown RBP9.24□□□□□ -0.93
PMS1-208ENST00000421722 DICER1Q9UPY3 1922 aaKnown RBP9.24□□□□□ -0.93
PMS1-208ENST00000421722 FOXN1O15353 648 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms