RNA–Protein interactions for RNA: ENST00000420987.5

SEMA4D-207, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-207ENST00000420987 DDX17Q92841 729 aaKnown RBP11.39□□□□□ -0.59
SEMA4D-207ENST00000420987 TNNQ9UQP3 1299 aa11.39□□□□□ -0.59
SEMA4D-207ENST00000420987 AMOTQ4VCS5 1084 aa11.39□□□□□ -0.59
SEMA4D-207ENST00000420987 CABLES1Q8TDN4 633 aa11.39□□□□□ -0.59
SEMA4D-207ENST00000420987 SPG7Q9UQ90 795 aa11.39□□□□□ -0.59
SEMA4D-207ENST00000420987 EYA1Q99502 592 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 DIAPH3Q9NSV4 1193 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 IL16Q14005 1332 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 NRXN3Q9Y4C0 1643 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 LRRC59Q96AG4 307 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 THUMPD2Q9BTF0 503 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 CHRNA2Q15822 529 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 IFT57Q9NWB7 429 aa11.38□□□□□ -0.59
SEMA4D-207ENST00000420987 UBAP1LF5GYI3 381 aa11.37□□□□□ -0.59
SEMA4D-207ENST00000420987 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-207ENST00000420987 NCOA3Q9Y6Q9 1424 aa11.37□□□□□ -0.59
SEMA4D-207ENST00000420987 HMGN5P82970 282 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-207ENST00000420987 RRAGDQ9NQL2 400 aaPredicted RBP11.37□□□□□ -0.59
SEMA4D-207ENST00000420987 OS9Q13438 667 aaPredicted RBP11.37□□□□□ -0.59
SEMA4D-207ENST00000420987 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
SEMA4D-207ENST00000420987 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 PDE3AQ14432 1141 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 MCM10Q7L590 875 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 PHACTR3Q96KR7 559 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 CDK12Q9NYV4 1490 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 DCTN1Q14203 1278 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 TWISTNBQ3B726 338 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 KIF24Q5T7B8 1368 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 TTC5Q8N0Z6 440 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 PDCL2Q8N4E4 241 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 DEF6Q9H4E7 631 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 KNDC1Q76NI1 1749 aa11.36□□□□□ -0.59
SEMA4D-207ENST00000420987 CD163L1Q9NR16 1453 aa11.35□□□□□ -0.59
SEMA4D-207ENST00000420987 DHX37Q8IY37 1157 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-207ENST00000420987 MYOM1P52179 1685 aa11.35□□□□□ -0.59
SEMA4D-207ENST00000420987 XRCC6P12956 609 aaKnown RBP eCLIP11.35□□□□□ -0.59
SEMA4D-207ENST00000420987 BRINP3Q76B58 766 aa11.35□□□□□ -0.59
SEMA4D-207ENST00000420987 ZSCAN30Q86W11 494 aa11.35□□□□□ -0.59
SEMA4D-207ENST00000420987 CCDC173Q0VFZ6 552 aa11.35□□□□□ -0.59
SEMA4D-207ENST00000420987 MCTP1Q6DN14 999 aa11.35□□□□□ -0.59
SEMA4D-207ENST00000420987 CFAP44Q96MT7 982 aa11.34□□□□□ -0.59
SEMA4D-207ENST00000420987 API5Q9BZZ5 524 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-207ENST00000420987 CLCN1P35523 988 aa11.34□□□□□ -0.59
SEMA4D-207ENST00000420987 MEX3CQ5U5Q3 659 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-207ENST00000420987 CWC15Q9P013 229 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-207ENST00000420987 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 RTL1A6NKG5 1358 aa11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 ZNF142P52746 1687 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 FAM83GA6ND36 823 aa11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 H0YHG0 523 aa11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 CCDC39Q9UFE4 941 aa11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 ARHGEF25Q86VW2 580 aa11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 DCCP43146 1447 aa11.33□□□□□ -0.6
SEMA4D-207ENST00000420987 EIF2S2P20042 333 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 MTHFSDQ2M296 383 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 USP32Q8NFA0 1604 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 DDX19BQ9UMR2 479 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 ITSN1Q15811 1721 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 PHF14O94880 888 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 PLEKHF1Q96S99 279 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 OVOS2A0A0J9YW53 1432 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 OVOS2Q6IE36 1432 aa11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 RARSP54136 660 aaKnown RBP11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 TAF7Q15545 349 aaPredicted RBP11.32□□□□□ -0.6
SEMA4D-207ENST00000420987 KIF3AQ9Y496 699 aa11.31□□□□□ -0.6
SEMA4D-207ENST00000420987 CCDC30Q5VVM6 783 aa11.31□□□□□ -0.6
SEMA4D-207ENST00000420987 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
SEMA4D-207ENST00000420987 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
SEMA4D-207ENST00000420987 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 KDM2BQ8NHM5 1336 aa11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 RDXP35241 583 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 TRIM35Q9UPQ4 493 aa11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 DDX54Q8TDD1 881 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 NBPF6Q5VWK0 638 aa11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 NBPF4Q96M43 638 aa11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 MBIPQ9NS73 344 aa11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 NOB1Q9ULX3 412 aaKnown RBP11.3□□□□□ -0.6
SEMA4D-207ENST00000420987 BTBD11A6QL63 1104 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 RLBP1P12271 317 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 ALDH1L2Q3SY69 923 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 TOMM22Q9NS69 142 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 MIS18AQ9NYP9 233 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 CABP4P57796 275 aa11.29□□□□□ -0.6
SEMA4D-207ENST00000420987 IGSF1Q8N6C5 1336 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms