RNA–Protein interactions for RNA: ENST00000420967.5

RFC5-202, Transcript of replication factor C subunit 5, humanhuman

TSL 3

Gene RFC5, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-202ENST00000420967 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
RFC5-202ENST00000420967 PHF14O94880 888 aa22.28■■□□□ 1.16
RFC5-202ENST00000420967 HSP90AB1P08238 724 aaKnown RBP22.28■■□□□ 1.16
RFC5-202ENST00000420967 ERVV-2B6SEH9 535 aa22.27■■□□□ 1.16
RFC5-202ENST00000420967 ATP6V1AP38606 617 aa22.27■■□□□ 1.16
RFC5-202ENST00000420967 HMOX1P09601 288 aa22.26■■□□□ 1.15
RFC5-202ENST00000420967 C1orf141Q5JVX7 400 aa22.26■■□□□ 1.15
RFC5-202ENST00000420967 HMGB2P26583 209 aaKnown RBP22.25■■□□□ 1.15
RFC5-202ENST00000420967 CABP4P57796 275 aa22.25■■□□□ 1.15
RFC5-202ENST00000420967 FLAD1Q8NFF5 587 aa22.25■■□□□ 1.15
RFC5-202ENST00000420967 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.24■■□□□ 1.15
RFC5-202ENST00000420967 SLC4A9Q96Q91 983 aa22.24■■□□□ 1.15
RFC5-202ENST00000420967 GOLGB1Q14789 3259 aaKnown RBP22.23■■□□□ 1.15
RFC5-202ENST00000420967 NLGN2Q8NFZ4 835 aa22.23■■□□□ 1.15
RFC5-202ENST00000420967 RBM42Q9BTD8 480 aaKnown RBP22.23■■□□□ 1.15
RFC5-202ENST00000420967 DIAPH1O60610 1272 aaKnown RBP22.22■■□□□ 1.15
RFC5-202ENST00000420967 NPC1L1Q9UHC9 1359 aa22.22■■□□□ 1.15
RFC5-202ENST00000420967 GNPATO15228 680 aa22.21■■□□□ 1.15
RFC5-202ENST00000420967 NFATC2IPQ8NCF5 419 aa22.21■■□□□ 1.15
RFC5-202ENST00000420967 UBR3Q6ZT12 1888 aa22.21■■□□□ 1.15
RFC5-202ENST00000420967 SSFA2P28290 1259 aa22.2■■□□□ 1.14
RFC5-202ENST00000420967 COL3A1P02461 1466 aaPredicted RBP22.18■■□□□ 1.14
RFC5-202ENST00000420967 PTCD1O75127 700 aaKnown RBP22.18■■□□□ 1.14
RFC5-202ENST00000420967 GPR162Q16538 588 aa22.18■■□□□ 1.14
RFC5-202ENST00000420967 AKAP4Q5JQC9 854 aa22.18■■□□□ 1.14
RFC5-202ENST00000420967 PELP1Q8IZL8 1130 aaKnown RBP22.18■■□□□ 1.14
RFC5-202ENST00000420967 LGR6Q9HBX8 967 aa22.18■■□□□ 1.14
RFC5-202ENST00000420967 MTHFSDQ2M296 383 aaKnown RBP22.16■■□□□ 1.14
RFC5-202ENST00000420967 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
RFC5-202ENST00000420967 RNMTO43148 476 aaKnown RBP22.13■■□□□ 1.13
RFC5-202ENST00000420967 SLC52A2Q9HAB3 445 aa22.13■■□□□ 1.13
RFC5-202ENST00000420967 RTCBQ9Y3I0 505 aaKnown RBP22.13■■□□□ 1.13
RFC5-202ENST00000420967 SCN11AQ9UI33 1791 aa22.12■■□□□ 1.13
RFC5-202ENST00000420967 ZNF831Q5JPB2 1677 aa22.12■■□□□ 1.13
RFC5-202ENST00000420967 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
RFC5-202ENST00000420967 CNTNAP4Q9C0A0 1308 aa22.11■■□□□ 1.13
RFC5-202ENST00000420967 TRAPPC3LQ5T215 181 aa22.11■■□□□ 1.13
RFC5-202ENST00000420967 RC3H1Q5TC82 1133 aaKnown RBP22.11■■□□□ 1.13
RFC5-202ENST00000420967 YBX3P16989 372 aaKnown RBP eCLIP22.1■■□□□ 1.133e-7■■□□□ 12.2
RFC5-202ENST00000420967 SLC39A6Q13433 755 aa22.1■■□□□ 1.13
RFC5-202ENST00000420967 ARHGEF1Q92888 912 aaKnown RBP22.1■■□□□ 1.13
RFC5-202ENST00000420967 CD2APQ9Y5K6 639 aa22.1■■□□□ 1.13
RFC5-202ENST00000420967 MRC1P22897 1456 aa22.09■■□□□ 1.13
RFC5-202ENST00000420967 RPS6KA4O75676 772 aa22.08■■□□□ 1.13
RFC5-202ENST00000420967 CRKLP46109 303 aaKnown RBP22.08■■□□□ 1.13
RFC5-202ENST00000420967 MMP10P09238 476 aa22.07■■□□□ 1.12
RFC5-202ENST00000420967 PPP2R1AP30153 589 aa22.07■■□□□ 1.12
RFC5-202ENST00000420967 TJP1Q07157 1748 aa22.06■■□□□ 1.12
RFC5-202ENST00000420967 ZNF784Q8NCA9 323 aaPredicted RBP22.06■■□□□ 1.12
RFC5-202ENST00000420967 CFAP53Q96M91 514 aa22.06■■□□□ 1.12
RFC5-202ENST00000420967 WWC3Q9ULE0 1092 aa22.06■■□□□ 1.12
RFC5-202ENST00000420967 ADRA2BP18089 450 aa22.05■■□□□ 1.12
RFC5-202ENST00000420967 RFC4P35249 363 aa22.05■■□□□ 1.12
RFC5-202ENST00000420967 DNAJC10Q8IXB1 793 aa22.05■■□□□ 1.12
RFC5-202ENST00000420967 MYH14Q7Z406 1995 aaKnown RBP22.05■■□□□ 1.12
RFC5-202ENST00000420967 ADAMTS7Q9UKP4 1686 aa22.04■■□□□ 1.12
RFC5-202ENST00000420967 GYS1P13807 737 aa22.04■■□□□ 1.12
RFC5-202ENST00000420967 PRKAR2BP31323 418 aa22.03■■□□□ 1.12
RFC5-202ENST00000420967 INTS5Q6P9B9 1019 aaKnown RBP22.03■■□□□ 1.12
RFC5-202ENST00000420967 PHACTR3Q96KR7 559 aa22.03■■□□□ 1.12
RFC5-202ENST00000420967 KCPQ6ZWJ8 1503 aa22.02■■□□□ 1.12
RFC5-202ENST00000420967 NLGN1Q8N2Q7 840 aa22.02■■□□□ 1.12
RFC5-202ENST00000420967 IL17REQ8NFR9 667 aa22.02■■□□□ 1.12
RFC5-202ENST00000420967 GAS2L2Q8NHY3 880 aa22.02■■□□□ 1.12
RFC5-202ENST00000420967 RSPH6AQ9H0K4 717 aa22.02■■□□□ 1.12
RFC5-202ENST00000420967 SRP68Q9UHB9 627 aaKnown RBP22.02■■□□□ 1.12
RFC5-202ENST00000420967 CICQ96RK0 1608 aaPredicted RBP22.02■■□□□ 1.11
RFC5-202ENST00000420967 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
RFC5-202ENST00000420967 VIRMAQ69YN4 1812 aaKnown RBP22.01■■□□□ 1.11
RFC5-202ENST00000420967 C4AP0C0L4 1744 aa22■■□□□ 1.11
RFC5-202ENST00000420967 CHD4Q14839 1912 aa22■■□□□ 1.11
RFC5-202ENST00000420967 GRIN3BO60391 1043 aa22■■□□□ 1.11
RFC5-202ENST00000420967 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
RFC5-202ENST00000420967 CYP19A1P11511 503 aaPredicted RBP21.99■■□□□ 1.11
RFC5-202ENST00000420967 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
RFC5-202ENST00000420967 CCDC87Q9NVE4 849 aa21.99■■□□□ 1.11
RFC5-202ENST00000420967 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
RFC5-202ENST00000420967 USP42Q9H9J4 1324 aaKnown RBP21.98■■□□□ 1.11
RFC5-202ENST00000420967 TEFQ10587 303 aa21.97■■□□□ 1.11
RFC5-202ENST00000420967 FKBP8Q14318 412 aa21.96■■□□□ 1.11
RFC5-202ENST00000420967 TTC5Q8N0Z6 440 aa21.96■■□□□ 1.11
RFC5-202ENST00000420967 ZBTB1Q9Y2K1 713 aa21.96■■□□□ 1.11
RFC5-202ENST00000420967 PARP3Q9Y6F1 533 aa21.95■■□□□ 1.1
RFC5-202ENST00000420967 SOS1Q07889 1333 aaPredicted RBP21.95■■□□□ 1.1
RFC5-202ENST00000420967 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
RFC5-202ENST00000420967 ZNF790Q6PG37 636 aa21.94■■□□□ 1.1
RFC5-202ENST00000420967 VSIG10Q8N0Z9 540 aa21.94■■□□□ 1.1
RFC5-202ENST00000420967 ZNF496Q96IT1 587 aaPredicted RBP21.94■■□□□ 1.1
RFC5-202ENST00000420967 C10orf71Q711Q0 1435 aa21.94■■□□□ 1.1
RFC5-202ENST00000420967 UBR2Q8IWV8 1755 aa21.94■■□□□ 1.1
RFC5-202ENST00000420967 A0A0G2JLW4 131 aa21.93■■□□□ 1.1
RFC5-202ENST00000420967 USPL1Q5W0Q7 1092 aa21.93■■□□□ 1.1
RFC5-202ENST00000420967 CEMIPQ8WUJ3 1361 aa21.93■■□□□ 1.1
RFC5-202ENST00000420967 FCHSD2O94868 740 aa21.92■■□□□ 1.1
RFC5-202ENST00000420967 DDR1Q08345 913 aa21.92■■□□□ 1.1
RFC5-202ENST00000420967 COL15A1P39059 1388 aa21.91■■□□□ 1.1
RFC5-202ENST00000420967 KCNQ3O43525 872 aa21.91■■□□□ 1.1
RFC5-202ENST00000420967 ZPR1O75312 459 aa21.91■■□□□ 1.1
RFC5-202ENST00000420967 CANXP27824 592 aaKnown RBP21.91■■□□□ 1.1
RFC5-202ENST00000420967 MCM10Q7L590 875 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms