RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 AMIGO3Q86WK7 504 aa23.7■■□□□ 1.38
MSH6-203ENST00000420813 GOLGB1Q14789 3259 aaKnown RBP23.7■■□□□ 1.38
MSH6-203ENST00000420813 COL5A3P25940 1745 aaPredicted RBP23.7■■□□□ 1.38
MSH6-203ENST00000420813 KDRP35968 1356 aa23.69■■□□□ 1.38
MSH6-203ENST00000420813 ATP6V1AP38606 617 aa23.69■■□□□ 1.38
MSH6-203ENST00000420813 ITPK1Q13572 414 aa23.69■■□□□ 1.38
MSH6-203ENST00000420813 CD2APQ9Y5K6 639 aa23.69■■□□□ 1.38
MSH6-203ENST00000420813 KDM6AO15550 1401 aaPredicted RBP23.68■■□□□ 1.38
MSH6-203ENST00000420813 PHF14O94880 888 aa23.68■■□□□ 1.38
MSH6-203ENST00000420813 ZNF530Q6P9A1 599 aaPredicted RBP23.68■■□□□ 1.38
MSH6-203ENST00000420813 SCN11AQ9UI33 1791 aa23.68■■□□□ 1.38
MSH6-203ENST00000420813 AEBP1Q8IUX7 1158 aa23.67■■□□□ 1.38
MSH6-203ENST00000420813 PELP1Q8IZL8 1130 aaKnown RBP23.67■■□□□ 1.38
MSH6-203ENST00000420813 GNPATO15228 680 aa23.65■■□□□ 1.38
MSH6-203ENST00000420813 GRIN3BO60391 1043 aa23.65■■□□□ 1.38
MSH6-203ENST00000420813 IL13P35225 146 aa23.65■■□□□ 1.38
MSH6-203ENST00000420813 SULT6B1Q6IMI4 303 aa23.65■■□□□ 1.38
MSH6-203ENST00000420813 VIRMAQ69YN4 1812 aaKnown RBP23.65■■□□□ 1.38
MSH6-203ENST00000420813 C1orf141Q5JVX7 400 aa23.64■■□□□ 1.37
MSH6-203ENST00000420813 SMIM5Q71RC9 77 aa23.63■■□□□ 1.37
MSH6-203ENST00000420813 MYH14Q7Z406 1995 aaKnown RBP23.63■■□□□ 1.37
MSH6-203ENST00000420813 CICQ96RK0 1608 aaPredicted RBP23.62■■□□□ 1.37
MSH6-203ENST00000420813 YBX3P16989 372 aaKnown RBP eCLIP23.62■■□□□ 1.37
MSH6-203ENST00000420813 MTHFSP49914 203 aa23.62■■□□□ 1.37
MSH6-203ENST00000420813 CABP4P57796 275 aa23.62■■□□□ 1.37
MSH6-203ENST00000420813 PER1O15534 1290 aaPredicted RBP23.61■■□□□ 1.37
MSH6-203ENST00000420813 SLC4A9Q96Q91 983 aa23.61■■□□□ 1.37
MSH6-203ENST00000420813 RBM42Q9BTD8 480 aaKnown RBP23.61■■□□□ 1.37
MSH6-203ENST00000420813 RC3H1Q5TC82 1133 aaKnown RBP23.6■■□□□ 1.37
MSH6-203ENST00000420813 KIF13BQ9NQT8 1826 aa23.6■■□□□ 1.37
MSH6-203ENST00000420813 CNTNAP4Q9C0A0 1308 aa23.59■■□□□ 1.37
MSH6-203ENST00000420813 RTCBQ9Y3I0 505 aaKnown RBP23.59■■□□□ 1.37
MSH6-203ENST00000420813 ADRA2BP18089 450 aa23.58■■□□□ 1.37
MSH6-203ENST00000420813 C4AP0C0L4 1744 aa23.58■■□□□ 1.37
MSH6-203ENST00000420813 TJP1Q07157 1748 aa23.57■■□□□ 1.36
MSH6-203ENST00000420813 NPC1L1Q9UHC9 1359 aa23.56■■□□□ 1.36
MSH6-203ENST00000420813 AKAP4Q5JQC9 854 aa23.56■■□□□ 1.36
MSH6-203ENST00000420813 TRAPPC3LQ5T215 181 aa23.56■■□□□ 1.36
MSH6-203ENST00000420813 NFATC2IPQ8NCF5 419 aa23.56■■□□□ 1.36
MSH6-203ENST00000420813 ADAMTS7Q9UKP4 1686 aa23.54■■□□□ 1.36
MSH6-203ENST00000420813 RPS6KA4O75676 772 aa23.54■■□□□ 1.36
MSH6-203ENST00000420813 MRC1P22897 1456 aa23.54■■□□□ 1.36
MSH6-203ENST00000420813 NLGN1Q8N2Q7 840 aa23.53■■□□□ 1.36
MSH6-203ENST00000420813 MMP10P09238 476 aa23.52■■□□□ 1.36
MSH6-203ENST00000420813 CC2D1BQ5T0F9 858 aaKnown RBP23.52■■□□□ 1.36
MSH6-203ENST00000420813 ARHGEF1Q92888 912 aaKnown RBP23.52■■□□□ 1.36
MSH6-203ENST00000420813 KIAA1551Q9HCM1 1747 aa23.52■■□□□ 1.36
MSH6-203ENST00000420813 DIAPH1O60610 1272 aaKnown RBP23.51■■□□□ 1.35
MSH6-203ENST00000420813 PTCD1O75127 700 aaKnown RBP23.51■■□□□ 1.35
MSH6-203ENST00000420813 HMOX1P09601 288 aa23.5■■□□□ 1.35
MSH6-203ENST00000420813 RFC4P35249 363 aa23.49■■□□□ 1.35
MSH6-203ENST00000420813 SLC52A2Q9HAB3 445 aa23.49■■□□□ 1.35
MSH6-203ENST00000420813 N4BP2Q86UW6 1770 aaPredicted RBP23.49■■□□□ 1.35
MSH6-203ENST00000420813 COL3A1P02461 1466 aaPredicted RBP23.49■■□□□ 1.35
MSH6-203ENST00000420813 GYS1P13807 737 aa23.48■■□□□ 1.35
MSH6-203ENST00000420813 CRKLP46109 303 aaKnown RBP23.48■■□□□ 1.35
MSH6-203ENST00000420813 C1QTNF8P60827 252 aa23.47■■□□□ 1.35
MSH6-203ENST00000420813 C10orf71Q711Q0 1435 aa23.47■■□□□ 1.35
MSH6-203ENST00000420813 BRCA1P38398 1863 aaKnown RBP23.47■■□□□ 1.35
MSH6-203ENST00000420813 PXDNLA1KZ92 1463 aa23.46■■□□□ 1.35
MSH6-203ENST00000420813 RNMTO43148 476 aaKnown RBP23.46■■□□□ 1.35
MSH6-203ENST00000420813 UBR2Q8IWV8 1755 aa23.46■■□□□ 1.35
MSH6-203ENST00000420813 LGR6Q9HBX8 967 aa23.46■■□□□ 1.35
MSH6-203ENST00000420813 GIGYF1O75420 1035 aaPredicted RBP23.45■■□□□ 1.34
MSH6-203ENST00000420813 MTHFSDQ2M296 383 aaKnown RBP23.45■■□□□ 1.34
MSH6-203ENST00000420813 TGFB2P61812 414 aa23.44■■□□□ 1.34
MSH6-203ENST00000420813 KCPQ6ZWJ8 1503 aa23.43■■□□□ 1.34
MSH6-203ENST00000420813 ATP10DQ9P241 1426 aa23.43■■□□□ 1.34
MSH6-203ENST00000420813 ADCY9O60503 1353 aa23.43■■□□□ 1.34
MSH6-203ENST00000420813 CCDC87Q9NVE4 849 aa23.43■■□□□ 1.34
MSH6-203ENST00000420813 USP42Q9H9J4 1324 aaKnown RBP23.42■■□□□ 1.34
MSH6-203ENST00000420813 PARP3Q9Y6F1 533 aa23.42■■□□□ 1.34
MSH6-203ENST00000420813 INTS5Q6P9B9 1019 aaKnown RBP23.41■■□□□ 1.34
MSH6-203ENST00000420813 WWC3Q9ULE0 1092 aa23.41■■□□□ 1.34
MSH6-203ENST00000420813 SIPA1L3O60292 1781 aaPredicted RBP23.41■■□□□ 1.34
MSH6-203ENST00000420813 DNAJC10Q8IXB1 793 aa23.4■■□□□ 1.34
MSH6-203ENST00000420813 ARFGEF1Q9Y6D6 1849 aa23.4■■□□□ 1.34
MSH6-203ENST00000420813 SLC39A6Q13433 755 aa23.39■■□□□ 1.33
MSH6-203ENST00000420813 U2SURPO15042 1029 aaKnown RBP23.38■■□□□ 1.33
MSH6-203ENST00000420813 VSIG10Q8N0Z9 540 aa23.38■■□□□ 1.33
MSH6-203ENST00000420813 SRP68Q9UHB9 627 aaKnown RBP23.38■■□□□ 1.33
MSH6-203ENST00000420813 SOS1Q07889 1333 aaPredicted RBP23.37■■□□□ 1.33
MSH6-203ENST00000420813 CYP19A1P11511 503 aaPredicted RBP23.37■■□□□ 1.33
MSH6-203ENST00000420813 GAS2L2Q8NHY3 880 aa23.37■■□□□ 1.33
MSH6-203ENST00000420813 A0A0G2JLW4 131 aa23.36■■□□□ 1.33
MSH6-203ENST00000420813 CNGB1Q14028 1251 aaPredicted RBP23.36■■□□□ 1.33
MSH6-203ENST00000420813 FKBP8Q14318 412 aa23.36■■□□□ 1.33
MSH6-203ENST00000420813 SENP3-EIF4A1A0A087X0R7 540 aa23.35■■□□□ 1.33
MSH6-203ENST00000420813 AFDNP55196 1824 aaKnown RBP23.35■■□□□ 1.33
MSH6-203ENST00000420813 GNAT3A8MTJ3 354 aa23.34■■□□□ 1.33
MSH6-203ENST00000420813 ZPR1O75312 459 aa23.34■■□□□ 1.33
MSH6-203ENST00000420813 DPEP1P16444 411 aa23.34■■□□□ 1.33
MSH6-203ENST00000420813 CFAP53Q96M91 514 aa23.34■■□□□ 1.33
MSH6-203ENST00000420813 GPBP1L1Q9HC44 474 aaPredicted RBP23.34■■□□□ 1.33
MSH6-203ENST00000420813 BCS1LQ9Y276 419 aa23.34■■□□□ 1.33
MSH6-203ENST00000420813 COL15A1P39059 1388 aa23.33■■□□□ 1.33
MSH6-203ENST00000420813 DDR1Q08345 913 aa23.33■■□□□ 1.33
MSH6-203ENST00000420813 TM4SF1P30408 202 aa23.32■■□□□ 1.32
MSH6-203ENST00000420813 TTC5Q8N0Z6 440 aa23.32■■□□□ 1.32
MSH6-203ENST00000420813 NRXN2Q9P2S2 1712 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms