RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 LINC00116Q8NCU8 138 aa27.75■■■□□ 2.03
MCF2L-212ENST00000420013 VIRMAQ69YN4 1812 aaKnown RBP27.75■■■□□ 2.03
MCF2L-212ENST00000420013 GPR162Q16538 588 aa27.74■■■□□ 2.03
MCF2L-212ENST00000420013 ATG3Q9NT62 314 aa27.74■■■□□ 2.03
MCF2L-212ENST00000420013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.73■■■□□ 2.03
MCF2L-212ENST00000420013 C1orf141Q5JVX7 400 aa27.73■■■□□ 2.03
MCF2L-212ENST00000420013 NPC1L1Q9UHC9 1359 aa27.73■■■□□ 2.03
MCF2L-212ENST00000420013 GOLGB1Q14789 3259 aaKnown RBP27.72■■■□□ 2.03
MCF2L-212ENST00000420013 ATP6V1AP38606 617 aa27.72■■■□□ 2.03
MCF2L-212ENST00000420013 AEBP1Q8IUX7 1158 aa27.72■■■□□ 2.03
MCF2L-212ENST00000420013 NLGN2Q8NFZ4 835 aa27.72■■■□□ 2.03
MCF2L-212ENST00000420013 IL13P35225 146 aa27.71■■■□□ 2.03
MCF2L-212ENST00000420013 ITPK1Q13572 414 aa27.71■■■□□ 2.03
MCF2L-212ENST00000420013 PHF14O94880 888 aa27.7■■■□□ 2.02
MCF2L-212ENST00000420013 SULT6B1Q6IMI4 303 aa27.7■■■□□ 2.02
MCF2L-212ENST00000420013 CD2APQ9Y5K6 639 aa27.7■■■□□ 2.02
MCF2L-212ENST00000420013 GNPATO15228 680 aa27.69■■■□□ 2.02
MCF2L-212ENST00000420013 AMIGO3Q86WK7 504 aa27.69■■■□□ 2.02
MCF2L-212ENST00000420013 C4AP0C0L4 1744 aa27.69■■■□□ 2.02
MCF2L-212ENST00000420013 MRC1P22897 1456 aa27.69■■■□□ 2.02
MCF2L-212ENST00000420013 PER1O15534 1290 aaPredicted RBP27.68■■■□□ 2.02
MCF2L-212ENST00000420013 ADAMTS7Q9UKP4 1686 aa27.68■■■□□ 2.02
MCF2L-212ENST00000420013 TJP1Q07157 1748 aa27.67■■■□□ 2.02
MCF2L-212ENST00000420013 CABP4P57796 275 aa27.67■■■□□ 2.02
MCF2L-212ENST00000420013 ZNF784Q8NCA9 323 aaPredicted RBP27.67■■■□□ 2.02
MCF2L-212ENST00000420013 KIF13BQ9NQT8 1826 aa27.67■■■□□ 2.02
MCF2L-212ENST00000420013 CNTNAP4Q9C0A0 1308 aa27.67■■■□□ 2.02
MCF2L-212ENST00000420013 MTHFSP49914 203 aa27.66■■■□□ 2.02
MCF2L-212ENST00000420013 PELP1Q8IZL8 1130 aaKnown RBP27.65■■■□□ 2.02
MCF2L-212ENST00000420013 MYH14Q7Z406 1995 aaKnown RBP27.64■■■□□ 2.02
MCF2L-212ENST00000420013 GRIN3BO60391 1043 aa27.64■■■□□ 2.02
MCF2L-212ENST00000420013 ADRA2BP18089 450 aa27.63■■■□□ 2.01
MCF2L-212ENST00000420013 RC3H1Q5TC82 1133 aaKnown RBP27.63■■■□□ 2.01
MCF2L-212ENST00000420013 RBM42Q9BTD8 480 aaKnown RBP27.63■■■□□ 2.01
MCF2L-212ENST00000420013 COL3A1P02461 1466 aaPredicted RBP27.63■■■□□ 2.01
MCF2L-212ENST00000420013 AKAP4Q5JQC9 854 aa27.62■■■□□ 2.01
MCF2L-212ENST00000420013 RTCBQ9Y3I0 505 aaKnown RBP27.62■■■□□ 2.01
MCF2L-212ENST00000420013 SLC4A9Q96Q91 983 aa27.61■■■□□ 2.01
MCF2L-212ENST00000420013 YBX3P16989 372 aaKnown RBP eCLIP27.58■■■□□ 2.01
MCF2L-212ENST00000420013 CC2D1BQ5T0F9 858 aaKnown RBP27.58■■■□□ 2.01
MCF2L-212ENST00000420013 KIAA1551Q9HCM1 1747 aa27.58■■■□□ 2.01
MCF2L-212ENST00000420013 DIAPH1O60610 1272 aaKnown RBP27.57■■■□□ 2
MCF2L-212ENST00000420013 SMIM5Q71RC9 77 aa27.57■■■□□ 2
MCF2L-212ENST00000420013 UBR2Q8IWV8 1755 aa27.56■■■□□ 2
MCF2L-212ENST00000420013 TRAPPC3LQ5T215 181 aa27.56■■■□□ 2
MCF2L-212ENST00000420013 RPS6KA4O75676 772 aa27.55■■■□□ 2
MCF2L-212ENST00000420013 NFATC2IPQ8NCF5 419 aa27.55■■■□□ 2
MCF2L-212ENST00000420013 C10orf71Q711Q0 1435 aa27.53■■■□□ 2
MCF2L-212ENST00000420013 HMOX1P09601 288 aa27.53■■■□□ 2
MCF2L-212ENST00000420013 NLGN1Q8N2Q7 840 aa27.53■■■□□ 2
MCF2L-212ENST00000420013 SLC52A2Q9HAB3 445 aa27.53■■■□□ 2
MCF2L-212ENST00000420013 PTCD1O75127 700 aaKnown RBP27.52■■■□□ 2
MCF2L-212ENST00000420013 MMP10P09238 476 aa27.52■■■□□ 2
MCF2L-212ENST00000420013 KCPQ6ZWJ8 1503 aa27.51■■■□□ 2
MCF2L-212ENST00000420013 RFC4P35249 363 aa27.5■■□□□ 1.99
MCF2L-212ENST00000420013 CRKLP46109 303 aaKnown RBP27.5■■□□□ 1.99
MCF2L-212ENST00000420013 ARHGEF1Q92888 912 aaKnown RBP27.5■■□□□ 1.99
MCF2L-212ENST00000420013 BRCA1P38398 1863 aaKnown RBP27.5■■□□□ 1.99
MCF2L-212ENST00000420013 SIPA1L3O60292 1781 aaPredicted RBP27.5■■□□□ 1.99
MCF2L-212ENST00000420013 PXDNLA1KZ92 1463 aa27.5■■□□□ 1.99
MCF2L-212ENST00000420013 RNMTO43148 476 aaKnown RBP27.49■■□□□ 1.99
MCF2L-212ENST00000420013 N4BP2Q86UW6 1770 aaPredicted RBP27.48■■□□□ 1.99
MCF2L-212ENST00000420013 GYS1P13807 737 aa27.47■■□□□ 1.99
MCF2L-212ENST00000420013 MTHFSDQ2M296 383 aaKnown RBP27.46■■□□□ 1.99
MCF2L-212ENST00000420013 ADCY9O60503 1353 aa27.45■■□□□ 1.98
MCF2L-212ENST00000420013 USP42Q9H9J4 1324 aaKnown RBP27.44■■□□□ 1.98
MCF2L-212ENST00000420013 LGR6Q9HBX8 967 aa27.44■■□□□ 1.98
MCF2L-212ENST00000420013 CCDC87Q9NVE4 849 aa27.44■■□□□ 1.98
MCF2L-212ENST00000420013 TGFB2P61812 414 aa27.43■■□□□ 1.98
MCF2L-212ENST00000420013 GAS2L2Q8NHY3 880 aa27.43■■□□□ 1.98
MCF2L-212ENST00000420013 ARFGEF1Q9Y6D6 1849 aa27.42■■□□□ 1.98
MCF2L-212ENST00000420013 CFAP53Q96M91 514 aa27.42■■□□□ 1.98
MCF2L-212ENST00000420013 PARP3Q9Y6F1 533 aa27.42■■□□□ 1.98
MCF2L-212ENST00000420013 ATP10DQ9P241 1426 aa27.41■■□□□ 1.98
MCF2L-212ENST00000420013 U2SURPO15042 1029 aaKnown RBP27.41■■□□□ 1.98
MCF2L-212ENST00000420013 GIGYF1O75420 1035 aaPredicted RBP27.41■■□□□ 1.98
MCF2L-212ENST00000420013 VSIG10Q8N0Z9 540 aa27.41■■□□□ 1.98
MCF2L-212ENST00000420013 INTS5Q6P9B9 1019 aaKnown RBP27.39■■□□□ 1.98
MCF2L-212ENST00000420013 DNAJC10Q8IXB1 793 aa27.39■■□□□ 1.98
MCF2L-212ENST00000420013 SOS1Q07889 1333 aaPredicted RBP27.39■■□□□ 1.97
MCF2L-212ENST00000420013 C1QTNF8P60827 252 aa27.38■■□□□ 1.97
MCF2L-212ENST00000420013 NRXN2Q9P2S2 1712 aa27.37■■□□□ 1.97
MCF2L-212ENST00000420013 COL15A1P39059 1388 aa27.36■■□□□ 1.97
MCF2L-212ENST00000420013 CYP19A1P11511 503 aaPredicted RBP27.36■■□□□ 1.97
MCF2L-212ENST00000420013 SLC39A6Q13433 755 aa27.36■■□□□ 1.97
MCF2L-212ENST00000420013 SCN7AQ01118 1682 aa27.36■■□□□ 1.97
MCF2L-212ENST00000420013 GNAT3A8MTJ3 354 aa27.35■■□□□ 1.97
MCF2L-212ENST00000420013 CNGB1Q14028 1251 aaPredicted RBP27.35■■□□□ 1.97
MCF2L-212ENST00000420013 TTC5Q8N0Z6 440 aa27.35■■□□□ 1.97
MCF2L-212ENST00000420013 SRP68Q9UHB9 627 aaKnown RBP27.35■■□□□ 1.97
MCF2L-212ENST00000420013 AFDNP55196 1824 aaKnown RBP27.34■■□□□ 1.97
MCF2L-212ENST00000420013 TEFQ10587 303 aa27.34■■□□□ 1.97
MCF2L-212ENST00000420013 CEMIPQ8WUJ3 1361 aa27.34■■□□□ 1.97
MCF2L-212ENST00000420013 NUDCQ9Y266 331 aa27.33■■□□□ 1.97
MCF2L-212ENST00000420013 ZPR1O75312 459 aa27.32■■□□□ 1.96
MCF2L-212ENST00000420013 FKBP8Q14318 412 aa27.32■■□□□ 1.96
MCF2L-212ENST00000420013 DLEC1Q9Y238 1755 aa27.32■■□□□ 1.96
MCF2L-212ENST00000420013 RSPH6AQ9H0K4 717 aa27.31■■□□□ 1.96
MCF2L-212ENST00000420013 WWC3Q9ULE0 1092 aa27.31■■□□□ 1.96
MCF2L-212ENST00000420013 ZBTB1Q9Y2K1 713 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms